Protein–RNA interactions for Protein: P52946

Pdx1, Pancreas/duodenum homeobox protein 1, mousemouse

Predictions only

Length 284 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Pdx1P52946 Abhd16b-201ENSMUST00000069649 1775 ntAPPRIS P1 BASIC14.66□□□□□ -0.06
Pdx1P52946 Gm29676-201ENSMUST00000222396 1689 ntTSL 1 (best) BASIC14.66□□□□□ -0.06
Pdx1P52946 Slc27a5-202ENSMUST00000120903 1468 ntTSL 1 (best) BASIC14.66□□□□□ -0.06
Pdx1P52946 Prmt7-203ENSMUST00000109297 1094 ntTSL 1 (best) BASIC14.66□□□□□ -0.06
Pdx1P52946 Rabepk-202ENSMUST00000113086 1106 ntTSL 5 BASIC14.66□□□□□ -0.06
Pdx1P52946 Gm6226-201ENSMUST00000117765 1146 ntBASIC14.66□□□□□ -0.06
Pdx1P52946 Tpt1-ps6-201ENSMUST00000121768 523 ntBASIC14.66□□□□□ -0.06
Pdx1P52946 Gm16151-201ENSMUST00000129696 639 ntTSL 3 BASIC14.66□□□□□ -0.06
Pdx1P52946 Psmb1-201ENSMUST00000014913 1036 ntAPPRIS P1 TSL 1 (best) BASIC14.66□□□□□ -0.06
Pdx1P52946 Anapc15-202ENSMUST00000035395 836 ntTSL 1 (best) BASIC14.66□□□□□ -0.06
Pdx1P52946 4930513N10Rik-203ENSMUST00000145562 2803 ntTSL 1 (best) BASIC14.66□□□□□ -0.06
Pdx1P52946 Nup62-205ENSMUST00000208626 2708 ntAPPRIS P1 TSL 5 BASIC14.66□□□□□ -0.06
Pdx1P52946 Nup62-201ENSMUST00000057195 2722 ntAPPRIS P1 TSL 1 (best) BASIC14.66□□□□□ -0.06
Pdx1P52946 Mxra8-201ENSMUST00000030947 2203 ntAPPRIS P1 TSL 1 (best) BASIC14.66□□□□□ -0.06
Pdx1P52946 Fbxo27-202ENSMUST00000108280 2031 ntTSL 1 (best) BASIC14.66□□□□□ -0.06
Pdx1P52946 Alas1-207ENSMUST00000141118 3399 ntAPPRIS P2 TSL 5 BASIC14.66□□□□□ -0.06
Pdx1P52946 Crybg1-201ENSMUST00000020017 6608 ntAPPRIS P2 TSL 5 BASIC14.66□□□□□ -0.06
Pdx1P52946 Dip2b-202ENSMUST00000100203 8914 ntAPPRIS P1 TSL 1 (best) BASIC14.66□□□□□ -0.06
Pdx1P52946 Brd3-203ENSMUST00000113941 5289 ntAPPRIS ALT2 TSL 5 BASIC14.66□□□□□ -0.06
Pdx1P52946 Rftn1-201ENSMUST00000044503 4029 ntAPPRIS P1 TSL 1 (best) BASIC14.66□□□□□ -0.06
Pdx1P52946 Carlr-201ENSMUST00000181515 2574 ntBASIC14.66□□□□□ -0.06
Pdx1P52946 Med22-202ENSMUST00000102899 3506 ntAPPRIS ALT1 TSL 1 (best) BASIC14.66□□□□□ -0.06
Pdx1P52946 Kcnh1-201ENSMUST00000078470 7242 ntAPPRIS P3 TSL 1 (best) BASIC14.66□□□□□ -0.06
Pdx1P52946 Eif2a-201ENSMUST00000029387 2299 ntAPPRIS P1 TSL 1 (best) BASIC14.66□□□□□ -0.06
Pdx1P52946 Cdc37l1-204ENSMUST00000224511 2944 ntAPPRIS ALT2 BASIC14.65□□□□□ -0.06
Pdx1P52946 Srpx-203ENSMUST00000115544 1865 ntAPPRIS ALT2 TSL 1 (best) BASIC14.65□□□□□ -0.06
Pdx1P52946 Ccer1-201ENSMUST00000060703 1865 ntAPPRIS P1 BASIC14.65□□□□□ -0.06
Pdx1P52946 Slc24a3-201ENSMUST00000081121 1788 ntAPPRIS P2 TSL 5 BASIC14.65□□□□□ -0.06
Pdx1P52946 Ogfrl1-201ENSMUST00000027343 4844 ntAPPRIS P1 TSL 3 BASIC14.65□□□□□ -0.06
Pdx1P52946 Kif17-201ENSMUST00000030539 3453 ntAPPRIS P3 TSL 1 (best) BASIC14.65□□□□□ -0.06
Pdx1P52946 Dse-201ENSMUST00000048010 4389 ntAPPRIS P1 TSL 1 (best) BASIC14.65□□□□□ -0.06
Pdx1P52946 Crem-203ENSMUST00000082141 2820 ntTSL 5 BASIC14.65□□□□□ -0.06
Pdx1P52946 Ifna12-201ENSMUST00000102806 797 ntAPPRIS P1 BASIC14.65□□□□□ -0.06
Pdx1P52946 Edn3-203ENSMUST00000140908 731 ntAPPRIS ALT2 TSL 5 BASIC14.65□□□□□ -0.06
Pdx1P52946 4933421O10Rik-201ENSMUST00000155691 3847 ntTSL 1 (best) BASIC14.65□□□□□ -0.06
Pdx1P52946 Gm17271-201ENSMUST00000165535 355 ntBASIC14.65□□□□□ -0.06
Pdx1P52946 Rpph1-201ENSMUST00000175096 319 ntBASIC14.65□□□□□ -0.06
Pdx1P52946 Psmg3-202ENSMUST00000182602 733 ntAPPRIS P1 TSL 1 (best) BASIC14.65□□□□□ -0.06
Pdx1P52946 Gm36972-201ENSMUST00000194000 676 ntTSL 3 BASIC14.65□□□□□ -0.06
Pdx1P52946 Gm20553-201ENSMUST00000204205 844 ntBASIC14.65□□□□□ -0.06
Pdx1P52946 CT025555.1-201ENSMUST00000225901 1217 ntBASIC14.65□□□□□ -0.06
Pdx1P52946 Cxcr3-201ENSMUST00000056614 1731 ntAPPRIS P1 TSL 1 (best) BASIC14.65□□□□□ -0.06
Pdx1P52946 Nrxn1-209ENSMUST00000161402 4953 ntTSL 5 BASIC14.65□□□□□ -0.06
Pdx1P52946 Krt74-201ENSMUST00000088018 1648 ntAPPRIS P1 TSL 2 BASIC14.65□□□□□ -0.06
Pdx1P52946 Hspa1a-201ENSMUST00000087328 2967 ntAPPRIS P1 BASIC14.65□□□□□ -0.06
Pdx1P52946 4930402H24Rik-202ENSMUST00000110243 1984 ntAPPRIS ALT2 TSL 1 (best) BASIC14.65□□□□□ -0.06
Pdx1P52946 Spsb1-203ENSMUST00000105685 1537 ntAPPRIS P1 TSL 1 (best) BASIC14.65□□□□□ -0.06
Pdx1P52946 Cgnl1-203ENSMUST00000122065 4487 ntAPPRIS P2 TSL 1 (best) BASIC14.65□□□□□ -0.06
Pdx1P52946 Edem3-202ENSMUST00000187951 3115 ntTSL 1 (best) BASIC14.65□□□□□ -0.06
Pdx1P52946 Gm16976-201ENSMUST00000099718 1894 ntTSL 5 BASIC14.65□□□□□ -0.06
Pdx1P52946 Tmem201-201ENSMUST00000054459 4631 ntAPPRIS ALT2 TSL 2 BASIC14.65□□□□□ -0.06
Pdx1P52946 Tcf3-206ENSMUST00000105342 2928 ntAPPRIS ALT2 TSL 1 (best) BASIC14.65□□□□□ -0.06
Pdx1P52946 Guca1b-201ENSMUST00000024774 1668 ntAPPRIS P1 TSL 1 (best) BASIC14.65□□□□□ -0.06
Pdx1P52946 Pitpnm2-209ENSMUST00000161938 5866 ntAPPRIS ALT2 TSL 1 (best) BASIC14.64□□□□□ -0.07
Pdx1P52946 Ntng2-204ENSMUST00000102873 1593 ntAPPRIS ALT2 TSL 1 (best) BASIC14.64□□□□□ -0.07
Pdx1P52946 Gjb1-203ENSMUST00000119190 1585 ntAPPRIS P1 TSL 2 BASIC14.64□□□□□ -0.07
Pdx1P52946 Snx8-205ENSMUST00000196566 1914 ntAPPRIS ALT2 TSL 5 BASIC14.64□□□□□ -0.07
Pdx1P52946 Fam228b-201ENSMUST00000053458 2851 ntAPPRIS P2 TSL 1 (best) BASIC14.64□□□□□ -0.07
Pdx1P52946 Stra8-201ENSMUST00000031876 1803 ntAPPRIS P2 TSL 1 (best) BASIC14.64□□□□□ -0.07
Pdx1P52946 Prmt5-201ENSMUST00000023873 2691 ntAPPRIS P1 TSL 1 (best) BASIC14.64□□□□□ -0.07
Pdx1P52946 Slc25a19-201ENSMUST00000021089 2307 ntAPPRIS P1 TSL 1 (best) BASIC14.64□□□□□ -0.07
Pdx1P52946 Sp8-201ENSMUST00000063918 4478 ntAPPRIS P1 TSL 1 (best) BASIC14.64□□□□□ -0.07
Pdx1P52946 Aph1a-202ENSMUST00000056710 1601 ntAPPRIS P1 TSL 1 (best) BASIC14.64□□□□□ -0.07
Pdx1P52946 Pde1c-203ENSMUST00000164037 3068 ntTSL 1 (best) BASIC14.64□□□□□ -0.07
Pdx1P52946 Pitpnm1-202ENSMUST00000100022 4512 ntAPPRIS P1 TSL 1 (best) BASIC14.64□□□□□ -0.07
Pdx1P52946 Gm43598-201ENSMUST00000202482 2479 ntBASIC14.64□□□□□ -0.07
Pdx1P52946 Trp53-206ENSMUST00000171247 1867 ntAPPRIS ALT2 TSL 1 (best) BASIC14.64□□□□□ -0.07
Pdx1P52946 Cnbp-202ENSMUST00000113617 952 ntTSL 5 BASIC14.64□□□□□ -0.07
Pdx1P52946 Sfxn5-203ENSMUST00000113787 638 ntTSL 2 BASIC14.64□□□□□ -0.07
Pdx1P52946 Rhox7b-201ENSMUST00000115156 1091 ntAPPRIS P1 TSL 1 (best) BASIC14.64□□□□□ -0.07
Pdx1P52946 Slc36a3os-201ENSMUST00000155883 520 ntTSL 1 (best) BASIC14.64□□□□□ -0.07
Pdx1P52946 Gm15492-201ENSMUST00000156734 606 ntTSL 1 (best) BASIC14.64□□□□□ -0.07
Pdx1P52946 Cldn25-ps-201ENSMUST00000197641 693 ntBASIC14.64□□□□□ -0.07
Pdx1P52946 Cdhr5-201ENSMUST00000080654 2133 ntAPPRIS P3 TSL 1 (best) BASIC14.64□□□□□ -0.07
Pdx1P52946 Rhox7a-201ENSMUST00000096454 983 ntAPPRIS P1 TSL 1 (best) BASIC14.64□□□□□ -0.07
Pdx1P52946 Col7a1-201ENSMUST00000026740 9198 ntAPPRIS P1 TSL 1 (best) BASIC14.64□□□□□ -0.07
Pdx1P52946 Tcf21-202ENSMUST00000218002 1788 ntBASIC14.64□□□□□ -0.07
Pdx1P52946 Luc7l-203ENSMUST00000119928 1441 ntAPPRIS ALT2 TSL 5 BASIC14.64□□□□□ -0.07
Pdx1P52946 H2afy2-201ENSMUST00000020283 2175 ntAPPRIS P1 TSL 1 (best) BASIC14.64□□□□□ -0.07
Pdx1P52946 Dzip3-201ENSMUST00000114516 3331 ntAPPRIS P3 TSL 1 (best) BASIC14.64□□□□□ -0.07
Pdx1P52946 Vps26a-202ENSMUST00000105447 2597 ntAPPRIS P1 TSL 1 (best) BASIC14.64□□□□□ -0.07
Pdx1P52946 Dtd2-201ENSMUST00000021339 2564 ntAPPRIS P1 TSL 1 (best) BASIC14.64□□□□□ -0.07
Pdx1P52946 Zscan2-201ENSMUST00000044115 2310 ntAPPRIS P1 TSL 1 (best) BASIC14.64□□□□□ -0.07
Pdx1P52946 Gm20743-201ENSMUST00000191735 1576 ntTSL 1 (best) BASIC14.64□□□□□ -0.07
Pdx1P52946 Gm8096-201ENSMUST00000209921 1591 ntBASIC14.64□□□□□ -0.07
Pdx1P52946 Mef2b-204ENSMUST00000110146 1342 ntAPPRIS P3 TSL 1 (best) BASIC14.64□□□□□ -0.07
Pdx1P52946 P2rx3-203ENSMUST00000111616 1315 ntTSL 5 BASIC14.64□□□□□ -0.07
Pdx1P52946 Grhl2-203ENSMUST00000161405 1996 ntTSL 1 (best) BASIC14.64□□□□□ -0.07
Pdx1P52946 Ccdc154-202ENSMUST00000182292 1989 ntAPPRIS ALT2 TSL 5 BASIC14.64□□□□□ -0.07
Pdx1P52946 Pak2-201ENSMUST00000023467 5741 ntAPPRIS P1 TSL 1 (best) BASIC14.63□□□□□ -0.07
Pdx1P52946 Zfp184-202ENSMUST00000102978 3198 ntAPPRIS P1 TSL 5 BASIC14.63□□□□□ -0.07
Pdx1P52946 Scube2-203ENSMUST00000106729 3563 ntAPPRIS P2 TSL 1 (best) BASIC14.63□□□□□ -0.07
Pdx1P52946 Zufsp-205ENSMUST00000218880 2005 ntTSL 5 BASIC14.63□□□□□ -0.07
Pdx1P52946 Ercc1-201ENSMUST00000003645 1375 ntAPPRIS P1 TSL 1 (best) BASIC14.63□□□□□ -0.07
Pdx1P52946 Acot4-201ENSMUST00000021652 6203 ntAPPRIS P1 TSL 1 (best) BASIC14.63□□□□□ -0.07
Pdx1P52946 Ccna2-201ENSMUST00000029270 2965 ntAPPRIS P1 TSL 1 (best) BASIC14.63□□□□□ -0.07
Pdx1P52946 Gmppa-201ENSMUST00000037796 1539 ntAPPRIS P1 TSL 1 (best) BASIC14.63□□□□□ -0.07
Pdx1P52946 Rhpn1-201ENSMUST00000023244 1932 ntAPPRIS P3 TSL 1 (best) BASIC14.63□□□□□ -0.07
Pdx1P52946 Mib1-201ENSMUST00000052838 10231 ntAPPRIS P1 TSL 1 (best) BASIC14.63□□□□□ -0.07
Pdx1P52946 Park7-204ENSMUST00000105675 882 ntAPPRIS P1 TSL 5 BASIC14.63□□□□□ -0.07
Retrieved 100 of 76,532 protein–RNA pairs in 35.1 ms