Protein–RNA interactions for Protein: P52483

Ube2e3, Ubiquitin-conjugating enzyme E2 E3, mousemouse

Predictions only

Length 207 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ube2e3P52483 Fzd6-202ENSMUST00000179165 4325 ntAPPRIS P1 TSL 1 (best) BASIC14.21□□□□□ -0.13
Ube2e3P52483 Zscan2-201ENSMUST00000044115 2310 ntAPPRIS P1 TSL 1 (best) BASIC14.21□□□□□ -0.13
Ube2e3P52483 Kcnh4-202ENSMUST00000107363 3948 ntAPPRIS P1 TSL 5 BASIC14.21□□□□□ -0.13
Ube2e3P52483 Derl1-201ENSMUST00000022993 3175 ntAPPRIS P1 TSL 1 (best) BASIC14.21□□□□□ -0.14
Ube2e3P52483 Senp6-202ENSMUST00000164859 3853 ntAPPRIS ALT2 TSL 1 (best) BASIC14.21□□□□□ -0.14
Ube2e3P52483 Zkscan3-203ENSMUST00000116434 2600 ntAPPRIS P1 TSL 1 (best) BASIC14.21□□□□□ -0.14
Ube2e3P52483 Gm8237-201ENSMUST00000164484 2051 ntAPPRIS P5 TSL 5 BASIC14.21□□□□□ -0.14
Ube2e3P52483 Rnf217-201ENSMUST00000081989 11013 ntAPPRIS P1 TSL 5 BASIC14.21□□□□□ -0.14
Ube2e3P52483 Tmem241-202ENSMUST00000055447 2597 ntAPPRIS ALT2 TSL 1 (best) BASIC14.21□□□□□ -0.14
Ube2e3P52483 Mxra8-201ENSMUST00000030947 2203 ntAPPRIS P1 TSL 1 (best) BASIC14.21□□□□□ -0.14
Ube2e3P52483 Iqck-202ENSMUST00000106547 2026 ntAPPRIS P2 TSL 5 BASIC14.2□□□□□ -0.14
Ube2e3P52483 Wnk1-223ENSMUST00000177761 11303 ntAPPRIS ALT2 TSL 5 BASIC14.2□□□□□ -0.14
Ube2e3P52483 Nlrx1-203ENSMUST00000169651 3621 ntAPPRIS P1 TSL 1 (best) BASIC14.2□□□□□ -0.14
Ube2e3P52483 Rxra-202ENSMUST00000100251 1952 ntTSL 1 (best) BASIC14.2□□□□□ -0.14
Ube2e3P52483 Sugp2-214ENSMUST00000164403 4099 ntAPPRIS P1 TSL 1 (best) BASIC14.2□□□□□ -0.14
Ube2e3P52483 Chac1-201ENSMUST00000028780 1637 ntAPPRIS P1 TSL 1 (best) BASIC14.2□□□□□ -0.14
Ube2e3P52483 Ano8-201ENSMUST00000093450 3653 ntAPPRIS P2 TSL 1 (best) BASIC14.2□□□□□ -0.14
Ube2e3P52483 Ecel1-203ENSMUST00000160810 2898 ntAPPRIS P1 TSL 1 (best) BASIC14.2□□□□□ -0.14
Ube2e3P52483 Vapb-201ENSMUST00000067530 7029 ntAPPRIS P1 TSL 1 (best) BASIC14.2□□□□□ -0.14
Ube2e3P52483 Cpt2-203ENSMUST00000106720 1015 ntTSL 2 BASIC14.2□□□□□ -0.14
Ube2e3P52483 Rpl34-ps1-201ENSMUST00000121998 354 ntBASIC14.2□□□□□ -0.14
Ube2e3P52483 Gm28308-201ENSMUST00000128102 752 ntAPPRIS P1 TSL 3 BASIC14.2□□□□□ -0.14
Ube2e3P52483 Triqk-201ENSMUST00000143186 888 ntAPPRIS P1 TSL 1 (best) BASIC14.2□□□□□ -0.14
Ube2e3P52483 Ankrd65-202ENSMUST00000165000 1140 ntAPPRIS ALT2 TSL 5 BASIC14.2□□□□□ -0.14
Ube2e3P52483 Retsat-204ENSMUST00000176168 1203 ntTSL 5 BASIC14.2□□□□□ -0.14
Ube2e3P52483 Gm29520-201ENSMUST00000191209 1067 ntTSL 5 BASIC14.2□□□□□ -0.14
Ube2e3P52483 Sox2ot-202ENSMUST00000196058 753 ntTSL 3 BASIC14.2□□□□□ -0.14
Ube2e3P52483 Tdrkh-208ENSMUST00000200486 1231 ntTSL 3 BASIC14.2□□□□□ -0.14
Ube2e3P52483 Zfp524-203ENSMUST00000209030 1128 ntAPPRIS P1 TSL 5 BASIC14.2□□□□□ -0.14
Ube2e3P52483 Thap2-203ENSMUST00000218989 527 ntBASIC14.2□□□□□ -0.14
Ube2e3P52483 Zfyve21-206ENSMUST00000222843 705 ntTSL 3 BASIC14.2□□□□□ -0.14
Ube2e3P52483 Klk15-201ENSMUST00000068625 845 ntAPPRIS P1 TSL 1 (best) BASIC14.2□□□□□ -0.14
Ube2e3P52483 Rpl34-ps2-201ENSMUST00000081679 354 ntBASIC14.2□□□□□ -0.14
Ube2e3P52483 Gm10154-201ENSMUST00000084445 354 ntBASIC14.2□□□□□ -0.14
Ube2e3P52483 H2afy2-201ENSMUST00000020283 2175 ntAPPRIS P1 TSL 1 (best) BASIC14.2□□□□□ -0.14
Ube2e3P52483 Irs3-201ENSMUST00000057314 2337 ntAPPRIS P2 TSL 1 (best) BASIC14.2□□□□□ -0.14
Ube2e3P52483 Gm43598-201ENSMUST00000202482 2479 ntBASIC14.2□□□□□ -0.14
Ube2e3P52483 Pik3ap1-201ENSMUST00000059672 2615 ntAPPRIS P1 TSL 1 (best) BASIC14.2□□□□□ -0.14
Ube2e3P52483 Svip-201ENSMUST00000098414 3053 ntAPPRIS P1 TSL 1 (best) BASIC14.2□□□□□ -0.14
Ube2e3P52483 Zfp879-203ENSMUST00000109134 2414 ntAPPRIS P1 TSL 5 BASIC14.2□□□□□ -0.14
Ube2e3P52483 Zfp879-201ENSMUST00000049625 2408 ntAPPRIS P1 TSL 1 (best) BASIC14.2□□□□□ -0.14
Ube2e3P52483 Grin1os-201ENSMUST00000129723 2891 ntTSL 1 (best) BASIC14.2□□□□□ -0.14
Ube2e3P52483 Cdr2l-201ENSMUST00000053288 3700 ntAPPRIS P1 TSL 1 (best) BASIC14.19□□□□□ -0.14
Ube2e3P52483 AC131743.5-201ENSMUST00000220775 1618 ntBASIC14.19□□□□□ -0.14
Ube2e3P52483 Zfp90-201ENSMUST00000034382 2632 ntAPPRIS P1 TSL 1 (best) BASIC14.19□□□□□ -0.14
Ube2e3P52483 Mdm1-202ENSMUST00000163238 2461 ntAPPRIS ALT2 TSL 1 (best) BASIC14.19□□□□□ -0.14
Ube2e3P52483 Padi4-201ENSMUST00000026381 2316 ntAPPRIS P1 TSL 1 (best) BASIC14.19□□□□□ -0.14
Ube2e3P52483 Cldn11-201ENSMUST00000046174 1870 ntAPPRIS P1 TSL 1 (best) BASIC14.19□□□□□ -0.14
Ube2e3P52483 Galnt17-202ENSMUST00000160609 2875 ntTSL 5 BASIC14.19□□□□□ -0.14
Ube2e3P52483 Gm9768-201ENSMUST00000206007 2861 ntBASIC14.19□□□□□ -0.14
Ube2e3P52483 Susd3-202ENSMUST00000058196 1418 ntAPPRIS P3 TSL 1 (best) BASIC14.19□□□□□ -0.14
Ube2e3P52483 Dennd5b-201ENSMUST00000111557 9831 ntAPPRIS P1 TSL 5 BASIC14.19□□□□□ -0.14
Ube2e3P52483 Hist1h4n-201ENSMUST00000102979 430 ntAPPRIS P1 BASIC14.19□□□□□ -0.14
Ube2e3P52483 Hist1h4m-201ENSMUST00000104941 402 ntAPPRIS P1 BASIC14.19□□□□□ -0.14
Ube2e3P52483 Gm13597-201ENSMUST00000121239 375 ntBASIC14.19□□□□□ -0.14
Ube2e3P52483 Slc36a3os-201ENSMUST00000155883 520 ntTSL 1 (best) BASIC14.19□□□□□ -0.14
Ube2e3P52483 Cox6c-205ENSMUST00000156915 606 ntAPPRIS P1 TSL 5 BASIC14.19□□□□□ -0.14
Ube2e3P52483 Nudt3-209ENSMUST00000176876 465 ntTSL 2 BASIC14.19□□□□□ -0.14
Ube2e3P52483 Mrpl20-201ENSMUST00000030942 764 ntAPPRIS P1 TSL 1 (best) BASIC14.19□□□□□ -0.14
Ube2e3P52483 Acat3-201ENSMUST00000043923 2123 ntAPPRIS P1 TSL 1 (best) BASIC14.19□□□□□ -0.14
Ube2e3P52483 Nudt3-202ENSMUST00000062397 558 ntTSL 3 BASIC14.19□□□□□ -0.14
Ube2e3P52483 Pmm1-202ENSMUST00000071462 1059 ntTSL 1 (best) BASIC14.19□□□□□ -0.14
Ube2e3P52483 G0s2-201ENSMUST00000009777 871 ntAPPRIS P1 TSL 1 (best) BASIC14.19□□□□□ -0.14
Ube2e3P52483 St3gal3-202ENSMUST00000097912 2143 ntTSL 1 (best) BASIC14.19□□□□□ -0.14
Ube2e3P52483 Gm8281-202ENSMUST00000163719 1954 ntAPPRIS P1 TSL 5 BASIC14.19□□□□□ -0.14
Ube2e3P52483 Tmem237-201ENSMUST00000087475 1823 ntAPPRIS ALT2 TSL 1 (best) BASIC14.19□□□□□ -0.14
Ube2e3P52483 Tmem116-204ENSMUST00000111795 2221 ntAPPRIS ALT2 TSL 1 (best) BASIC14.19□□□□□ -0.14
Ube2e3P52483 Foxp1-208ENSMUST00000113329 1926 ntTSL 1 (best) BASIC14.19□□□□□ -0.14
Ube2e3P52483 Arf3-201ENSMUST00000053183 3579 ntAPPRIS P1 TSL 1 (best) BASIC14.19□□□□□ -0.14
Ube2e3P52483 Phka1-204ENSMUST00000119229 6025 ntAPPRIS ALT2 TSL 5 BASIC14.19□□□□□ -0.14
Ube2e3P52483 Gm16425-201ENSMUST00000118143 3130 ntBASIC14.19□□□□□ -0.14
Ube2e3P52483 Phykpl-201ENSMUST00000020625 1609 ntAPPRIS ALT2 TSL 1 (best) BASIC14.19□□□□□ -0.14
Ube2e3P52483 Slc27a5-202ENSMUST00000120903 1468 ntTSL 1 (best) BASIC14.18□□□□□ -0.14
Ube2e3P52483 Ccer1-201ENSMUST00000060703 1865 ntAPPRIS P1 BASIC14.18□□□□□ -0.14
Ube2e3P52483 Mrpl58-203ENSMUST00000106539 2522 ntTSL 1 (best) BASIC14.18□□□□□ -0.14
Ube2e3P52483 Oser1-202ENSMUST00000104954 1702 ntAPPRIS P1 TSL 1 (best) BASIC14.18□□□□□ -0.14
Ube2e3P52483 Gm3373-202ENSMUST00000177556 1955 ntAPPRIS P5 TSL 5 BASIC14.18□□□□□ -0.14
Ube2e3P52483 Gm3500-201ENSMUST00000177986 1955 ntAPPRIS P1 TSL 5 BASIC14.18□□□□□ -0.14
Ube2e3P52483 Cpsf6-207ENSMUST00000176686 2200 ntTSL 1 (best) BASIC14.18□□□□□ -0.14
Ube2e3P52483 Upk1a-201ENSMUST00000006476 1421 ntAPPRIS P1 TSL 1 (best) BASIC14.18□□□□□ -0.14
Ube2e3P52483 Sp2-203ENSMUST00000107624 3055 ntAPPRIS P2 TSL 1 (best) BASIC14.18□□□□□ -0.14
Ube2e3P52483 Nnat-202ENSMUST00000109526 1213 ntAPPRIS P4 TSL 1 (best) BASIC14.18□□□□□ -0.14
Ube2e3P52483 Gm13830-202ENSMUST00000144202 381 ntTSL 3 BASIC14.18□□□□□ -0.14
Ube2e3P52483 Atp6v0b-208ENSMUST00000150204 935 ntTSL 5 BASIC14.18□□□□□ -0.14
Ube2e3P52483 Gm11615-201ENSMUST00000156205 818 ntTSL 1 (best) BASIC14.18□□□□□ -0.14
Ube2e3P52483 Gm9727-201ENSMUST00000161387 555 ntBASIC14.18□□□□□ -0.14
Ube2e3P52483 Sardhos-201ENSMUST00000170435 265 ntTSL 3 BASIC14.18□□□□□ -0.14
Ube2e3P52483 Hddc3-206ENSMUST00000206074 565 ntTSL 2 BASIC14.18□□□□□ -0.14
Ube2e3P52483 5430427M07Rik-202ENSMUST00000221524 1023 ntTSL 1 (best) BASIC14.18□□□□□ -0.14
Ube2e3P52483 Rab33a-201ENSMUST00000033430 1158 ntAPPRIS P1 TSL 1 (best) BASIC14.18□□□□□ -0.14
Ube2e3P52483 Sf3b6-201ENSMUST00000046207 1180 ntAPPRIS P1 TSL 1 (best) BASIC14.18□□□□□ -0.14
Ube2e3P52483 Nabp1-205ENSMUST00000186684 2677 ntTSL 1 (best) BASIC14.18□□□□□ -0.14
Ube2e3P52483 Ralgds-203ENSMUST00000113893 3683 ntAPPRIS ALT2 TSL 1 (best) BASIC14.18□□□□□ -0.14
Ube2e3P52483 Psen2-204ENSMUST00000111106 2020 ntAPPRIS P2 TSL 5 BASIC14.18□□□□□ -0.14
Ube2e3P52483 Pld3-202ENSMUST00000117611 2297 ntAPPRIS P1 TSL 1 (best) BASIC14.18□□□□□ -0.14
Ube2e3P52483 Gm37728-201ENSMUST00000195025 2292 ntBASIC14.18□□□□□ -0.14
Ube2e3P52483 Ttyh1-203ENSMUST00000119661 2512 ntAPPRIS P1 TSL 1 (best) BASIC14.18□□□□□ -0.14
Ube2e3P52483 Alas1-207ENSMUST00000141118 3399 ntAPPRIS P2 TSL 5 BASIC14.18□□□□□ -0.14
Ube2e3P52483 Clip2-201ENSMUST00000036999 4893 ntAPPRIS ALT2 TSL 1 (best) BASIC14.18□□□□□ -0.14
Ube2e3P52483 Nup54-201ENSMUST00000038514 2352 ntAPPRIS P1 TSL 1 (best) BASIC14.18□□□□□ -0.14
Retrieved 100 of 76,532 protein–RNA pairs in 27.7 ms