Protein–RNA interactions for Protein: P50220

Nkx2-1, Homeobox protein Nkx-2.1, mousemouse

Predictions only

Length 372 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Nkx2-1P50220 Map3k9-202ENSMUST00000222322 3303 ntAPPRIS ALT2 TSL 5 BASIC12.31□□□□□ -0.44
Nkx2-1P50220 Lrwd1-201ENSMUST00000006301 2473 ntAPPRIS P1 TSL 1 (best) BASIC12.31□□□□□ -0.44
Nkx2-1P50220 Prpf31-202ENSMUST00000108636 1798 ntTSL 5 BASIC12.31□□□□□ -0.44
Nkx2-1P50220 Fam131c-201ENSMUST00000006380 1433 ntAPPRIS P1 TSL 1 (best) BASIC12.31□□□□□ -0.44
Nkx2-1P50220 Rnf103-203ENSMUST00000114179 2671 ntAPPRIS P1 TSL 5 BASIC12.31□□□□□ -0.44
Nkx2-1P50220 4930402H24Rik-202ENSMUST00000110243 1984 ntAPPRIS ALT2 TSL 1 (best) BASIC12.31□□□□□ -0.44
Nkx2-1P50220 Ndufa5-202ENSMUST00000118558 315 ntTSL 2 BASIC12.31□□□□□ -0.44
Nkx2-1P50220 Cul4a-202ENSMUST00000121426 1044 ntTSL 1 (best) BASIC12.31□□□□□ -0.44
Nkx2-1P50220 Gm13830-201ENSMUST00000124378 417 ntTSL 1 (best) BASIC12.31□□□□□ -0.44
Nkx2-1P50220 Gm15246-201ENSMUST00000149873 540 ntTSL 3 BASIC12.31□□□□□ -0.44
Nkx2-1P50220 Srgn-205ENSMUST00000162161 694 ntAPPRIS P1 TSL 3 BASIC12.31□□□□□ -0.44
Nkx2-1P50220 Sec61g-206ENSMUST00000166950 754 ntTSL 1 (best) BASIC12.31□□□□□ -0.44
Nkx2-1P50220 Sec61g-207ENSMUST00000178855 779 ntAPPRIS P1 TSL 1 (best) BASIC12.31□□□□□ -0.44
Nkx2-1P50220 Gm27177-205ENSMUST00000184792 706 ntTSL 5 BASIC12.31□□□□□ -0.44
Nkx2-1P50220 Gm9172-201ENSMUST00000212092 954 ntBASIC12.31□□□□□ -0.44
Nkx2-1P50220 AC158538.1-201ENSMUST00000225870 294 ntBASIC12.31□□□□□ -0.44
Nkx2-1P50220 Tctex1d4-201ENSMUST00000062206 990 ntAPPRIS P1 TSL 1 (best) BASIC12.31□□□□□ -0.44
Nkx2-1P50220 Rassf10-201ENSMUST00000182858 3496 ntAPPRIS P1 BASIC12.31□□□□□ -0.44
Nkx2-1P50220 Chtop-205ENSMUST00000107343 3118 ntTSL 1 (best) BASIC12.31□□□□□ -0.44
Nkx2-1P50220 Repin1-201ENSMUST00000009420 3145 ntAPPRIS P3 TSL 1 (best) BASIC12.31□□□□□ -0.44
Nkx2-1P50220 Syp-201ENSMUST00000069520 2591 ntAPPRIS P1 TSL 1 (best) BASIC12.31□□□□□ -0.44
Nkx2-1P50220 B020017C02Rik-201ENSMUST00000197444 1688 ntBASIC12.31□□□□□ -0.44
Nkx2-1P50220 Gm44645-201ENSMUST00000205492 1653 ntBASIC12.31□□□□□ -0.44
Nkx2-1P50220 Il2rb-202ENSMUST00000163494 1894 ntAPPRIS P1 TSL 1 (best) BASIC12.31□□□□□ -0.44
Nkx2-1P50220 Cope-201ENSMUST00000066469 1300 ntAPPRIS P1 TSL 1 (best) BASIC12.31□□□□□ -0.44
Nkx2-1P50220 Eif4g1-205ENSMUST00000115461 5507 ntAPPRIS ALT2 TSL 5 BASIC12.31□□□□□ -0.44
Nkx2-1P50220 Aarsd1-201ENSMUST00000070395 1516 ntAPPRIS P1 TSL 1 (best) BASIC12.31□□□□□ -0.44
Nkx2-1P50220 Tmem184c-201ENSMUST00000034030 2678 ntAPPRIS P1 TSL 1 (best) BASIC12.31□□□□□ -0.44
Nkx2-1P50220 2410002F23Rik-218ENSMUST00000188382 2301 ntAPPRIS P2 TSL 5 BASIC12.31□□□□□ -0.44
Nkx2-1P50220 Cluh-202ENSMUST00000117818 4284 ntAPPRIS ALT2 TSL 1 (best) BASIC12.31□□□□□ -0.44
Nkx2-1P50220 Pofut1-203ENSMUST00000099192 1385 ntTSL 1 (best) BASIC12.3□□□□□ -0.44
Nkx2-1P50220 Armc9-205ENSMUST00000131412 2160 ntAPPRIS P1 TSL 1 (best) BASIC12.3□□□□□ -0.44
Nkx2-1P50220 Retreg3-201ENSMUST00000017946 3165 ntAPPRIS P1 TSL 1 (best) BASIC12.3□□□□□ -0.44
Nkx2-1P50220 Cdhr5-202ENSMUST00000167263 2628 ntAPPRIS ALT2 TSL 1 (best) BASIC12.3□□□□□ -0.44
Nkx2-1P50220 Tmem2-202ENSMUST00000096194 6667 ntAPPRIS P1 TSL 5 BASIC12.3□□□□□ -0.44
Nkx2-1P50220 1700012B07Rik-202ENSMUST00000106674 2035 ntAPPRIS P4 TSL 1 (best) BASIC12.3□□□□□ -0.44
Nkx2-1P50220 Cbln3-202ENSMUST00000172378 1438 ntAPPRIS P1 TSL 1 (best) BASIC12.3□□□□□ -0.44
Nkx2-1P50220 Bptf-202ENSMUST00000106762 11847 ntAPPRIS ALT2 TSL 5 BASIC12.3□□□□□ -0.44
Nkx2-1P50220 Gigyf2-201ENSMUST00000027475 5724 ntAPPRIS P3 TSL 1 (best) BASIC12.3□□□□□ -0.44
Nkx2-1P50220 Dapk1-201ENSMUST00000044083 5304 ntAPPRIS P1 TSL 1 (best) BASIC12.3□□□□□ -0.44
Nkx2-1P50220 Trim27-206ENSMUST00000222544 4312 ntAPPRIS P1 TSL 5 BASIC12.3□□□□□ -0.44
Nkx2-1P50220 Iqce-202ENSMUST00000077890 2494 ntAPPRIS ALT2 TSL 1 (best) BASIC12.3□□□□□ -0.44
Nkx2-1P50220 A230060F14Rik-202ENSMUST00000190739 1889 ntBASIC12.3□□□□□ -0.44
Nkx2-1P50220 Tgif2-202ENSMUST00000081335 2900 ntAPPRIS P1 TSL 1 (best) BASIC12.3□□□□□ -0.44
Nkx2-1P50220 Luc7l3-209ENSMUST00000166312 5244 ntTSL 1 (best) BASIC12.3□□□□□ -0.44
Nkx2-1P50220 Fgf17-201ENSMUST00000022697 1689 ntAPPRIS P1 TSL 1 (best) BASIC12.3□□□□□ -0.44
Nkx2-1P50220 Gm13285-201ENSMUST00000179725 1462 ntAPPRIS P1 BASIC12.3□□□□□ -0.44
Nkx2-1P50220 Casp6-201ENSMUST00000029626 1456 ntAPPRIS P1 TSL 1 (best) BASIC12.3□□□□□ -0.44
Nkx2-1P50220 Barhl2-201ENSMUST00000086795 2314 ntAPPRIS P1 TSL 1 (best) BASIC12.3□□□□□ -0.44
Nkx2-1P50220 Rps27a-202ENSMUST00000102845 791 ntAPPRIS P1 TSL 1 (best) BASIC12.3□□□□□ -0.44
Nkx2-1P50220 Gm12973-201ENSMUST00000143967 607 ntTSL 5 BASIC12.3□□□□□ -0.44
Nkx2-1P50220 Gm20478-201ENSMUST00000173648 1031 ntTSL 3 BASIC12.3□□□□□ -0.44
Nkx2-1P50220 Gm20675-201ENSMUST00000175861 338 ntTSL 3 BASIC12.3□□□□□ -0.44
Nkx2-1P50220 Npw-201ENSMUST00000095544 638 ntAPPRIS ALT2 TSL 1 (best) BASIC12.3□□□□□ -0.44
Nkx2-1P50220 Lamp2-203ENSMUST00000074913 2184 ntAPPRIS ALT2 TSL 1 (best) BASIC12.3□□□□□ -0.44
Nkx2-1P50220 Slc13a3-201ENSMUST00000029208 3524 ntAPPRIS P2 TSL 1 (best) BASIC12.3□□□□□ -0.44
Nkx2-1P50220 Ssu2-201ENSMUST00000060847 1321 ntAPPRIS P1 TSL 1 (best) BASIC12.3□□□□□ -0.44
Nkx2-1P50220 Pld3-202ENSMUST00000117611 2297 ntAPPRIS P1 TSL 1 (best) BASIC12.3□□□□□ -0.44
Nkx2-1P50220 Ccser2-202ENSMUST00000090024 7509 ntAPPRIS P1 TSL 1 (best) BASIC12.3□□□□□ -0.44
Nkx2-1P50220 Ncbp2-201ENSMUST00000023460 2070 ntAPPRIS P1 TSL 1 (best) BASIC12.3□□□□□ -0.44
Nkx2-1P50220 Eml6-201ENSMUST00000058902 8083 ntAPPRIS P1 TSL 5 BASIC12.3□□□□□ -0.44
Nkx2-1P50220 Ddx42-201ENSMUST00000021046 4011 ntAPPRIS P1 TSL 1 (best) BASIC12.29□□□□□ -0.44
Nkx2-1P50220 Otop3-202ENSMUST00000106543 2369 ntAPPRIS ALT2 TSL 1 (best) BASIC12.29□□□□□ -0.44
Nkx2-1P50220 Tm6sf2-202ENSMUST00000110160 1446 ntAPPRIS ALT1 TSL 1 (best) BASIC12.29□□□□□ -0.44
Nkx2-1P50220 Rgs14-201ENSMUST00000063771 2356 ntAPPRIS P1 TSL 1 (best) BASIC12.29□□□□□ -0.44
Nkx2-1P50220 Ffar2-202ENSMUST00000163504 1913 ntAPPRIS P1 TSL 2 BASIC12.29□□□□□ -0.44
Nkx2-1P50220 Pola2-201ENSMUST00000025752 2424 ntAPPRIS P1 TSL 1 (best) BASIC12.29□□□□□ -0.44
Nkx2-1P50220 Ap4b1-202ENSMUST00000076599 2692 ntAPPRIS P1 TSL 1 (best) BASIC12.29□□□□□ -0.44
Nkx2-1P50220 Igsf21-201ENSMUST00000039331 1979 ntAPPRIS P1 TSL 1 (best) BASIC12.29□□□□□ -0.44
Nkx2-1P50220 Nfe2l2-201ENSMUST00000102672 2475 ntAPPRIS P1 TSL 1 (best) BASIC12.29□□□□□ -0.44
Nkx2-1P50220 Sh3glb1-201ENSMUST00000163279 3961 ntAPPRIS P1 TSL 1 (best) BASIC12.29□□□□□ -0.44
Nkx2-1P50220 Tbc1d1-201ENSMUST00000043893 6471 ntAPPRIS ALT2 TSL 2 BASIC12.29□□□□□ -0.44
Nkx2-1P50220 Pik3cd-214ENSMUST00000177654 4765 ntAPPRIS P4 TSL 5 BASIC12.29□□□□□ -0.44
Nkx2-1P50220 Arhgap33-203ENSMUST00000207858 4337 ntAPPRIS ALT2 TSL 1 (best) BASIC12.29□□□□□ -0.44
Nkx2-1P50220 Fgf8-205ENSMUST00000111927 843 ntAPPRIS ALT2 TSL 1 (best) BASIC12.29□□□□□ -0.44
Nkx2-1P50220 Crybb1-202ENSMUST00000112375 793 ntAPPRIS P1 TSL 3 BASIC12.29□□□□□ -0.44
Nkx2-1P50220 Eif4e2-205ENSMUST00000113232 1125 ntTSL 1 (best) BASIC12.29□□□□□ -0.44
Nkx2-1P50220 Stx3-208ENSMUST00000211641 1018 ntTSL 1 (best) BASIC12.29□□□□□ -0.44
Nkx2-1P50220 Zfp930-203ENSMUST00000212312 493 ntTSL 2 BASIC12.29□□□□□ -0.44
Nkx2-1P50220 Mrpl36-202ENSMUST00000221730 717 ntAPPRIS P1 TSL 3 BASIC12.29□□□□□ -0.44
Nkx2-1P50220 AC117588.1-201ENSMUST00000228510 999 ntBASIC12.29□□□□□ -0.44
Nkx2-1P50220 Il17a-201ENSMUST00000027061 1171 ntAPPRIS P1 TSL 1 (best) BASIC12.29□□□□□ -0.44
Nkx2-1P50220 Fgf9-202ENSMUST00000074654 1198 ntTSL 1 (best) BASIC12.29□□□□□ -0.44
Nkx2-1P50220 Rplp2-201ENSMUST00000084434 964 ntAPPRIS P1 TSL 1 (best) BASIC12.29□□□□□ -0.44
Nkx2-1P50220 Dnajc27-201ENSMUST00000020986 4698 ntAPPRIS P1 TSL 1 (best) BASIC12.29□□□□□ -0.44
Nkx2-1P50220 Slc35c2-201ENSMUST00000017808 1843 ntAPPRIS P1 TSL 1 (best) BASIC12.29□□□□□ -0.44
Nkx2-1P50220 Tstd3-201ENSMUST00000029915 1588 ntAPPRIS P1 TSL 1 (best) BASIC12.29□□□□□ -0.44
Nkx2-1P50220 Arl6-202ENSMUST00000099646 1554 ntTSL 1 (best) BASIC12.29□□□□□ -0.44
Nkx2-1P50220 Auh-201ENSMUST00000021913 1320 ntAPPRIS P1 TSL 1 (best) BASIC12.29□□□□□ -0.44
Nkx2-1P50220 Hnrnpa2b1-204ENSMUST00000203220 1638 ntAPPRIS P2 TSL 1 (best) BASIC12.29□□□□□ -0.44
Nkx2-1P50220 Ext1-201ENSMUST00000077273 7663 ntAPPRIS P1 TSL 1 (best) BASIC12.29□□□□□ -0.44
Nkx2-1P50220 Cit-203ENSMUST00000112008 6087 ntAPPRIS ALT2 TSL 5 BASIC12.29□□□□□ -0.44
Nkx2-1P50220 Notch1-201ENSMUST00000028288 9488 ntAPPRIS P1 TSL 1 (best) BASIC12.29□□□□□ -0.44
Nkx2-1P50220 Hnrnpr-204ENSMUST00000131671 2543 ntTSL 1 (best) BASIC12.29□□□□□ -0.44
Nkx2-1P50220 Klc2-203ENSMUST00000113728 2838 ntTSL 5 BASIC12.29□□□□□ -0.44
Nkx2-1P50220 Psma3-202ENSMUST00000160027 2846 ntAPPRIS P1 TSL 1 (best) BASIC12.29□□□□□ -0.44
Nkx2-1P50220 Mon1a-202ENSMUST00000191906 2821 ntTSL 2 BASIC12.29□□□□□ -0.44
Nkx2-1P50220 Gm5922-201ENSMUST00000214963 1723 ntTSL 1 (best) BASIC12.28□□□□□ -0.44
Nkx2-1P50220 Trim32-201ENSMUST00000050850 3194 ntAPPRIS P1 TSL 1 (best) BASIC12.28□□□□□ -0.44
Nkx2-1P50220 Fbxo27-202ENSMUST00000108280 2031 ntTSL 1 (best) BASIC12.28□□□□□ -0.44
Retrieved 100 of 76,532 protein–RNA pairs in 28.8 ms