Protein–RNA interactions for Protein: P48985

Atoh1, Protein atonal homolog 1, mousemouse

Predictions only

Length 351 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Atoh1P48985 Ccdc154-202ENSMUST00000182292 1989 ntAPPRIS ALT2 TSL 5 BASIC16.64■□□□□ 0.25
Atoh1P48985 Snx11-202ENSMUST00000107661 2197 ntAPPRIS P1 TSL 1 (best) BASIC16.64■□□□□ 0.25
Atoh1P48985 Trip6-201ENSMUST00000024119 2168 ntAPPRIS P1 TSL 1 (best) BASIC16.64■□□□□ 0.25
Atoh1P48985 4930473A02Rik-202ENSMUST00000136793 1409 ntTSL 1 (best) BASIC16.64■□□□□ 0.25
Atoh1P48985 Gbe1-203ENSMUST00000163832 2984 ntAPPRIS P5 TSL 5 BASIC16.64■□□□□ 0.25
Atoh1P48985 Cyb5r1-201ENSMUST00000027726 1837 ntAPPRIS P1 TSL 1 (best) BASIC16.64■□□□□ 0.25
Atoh1P48985 Ranbp9-201ENSMUST00000144326 3371 ntAPPRIS P2 TSL 5 BASIC16.64■□□□□ 0.25
Atoh1P48985 Tap1-201ENSMUST00000041633 2614 ntAPPRIS ALT2 TSL 1 (best) BASIC16.64■□□□□ 0.25
Atoh1P48985 Gm15393-201ENSMUST00000120499 219 ntBASIC16.64■□□□□ 0.25
Atoh1P48985 Gm5354-201ENSMUST00000182417 973 ntBASIC16.64■□□□□ 0.25
Atoh1P48985 Gm33320-201ENSMUST00000192232 530 ntBASIC16.64■□□□□ 0.25
Atoh1P48985 Gm42902-201ENSMUST00000199508 662 ntTSL 5 BASIC16.64■□□□□ 0.25
Atoh1P48985 AC166349.1-201ENSMUST00000220866 695 ntBASIC16.64■□□□□ 0.25
Atoh1P48985 S100b-201ENSMUST00000036387 1484 ntAPPRIS P1 TSL 1 (best) BASIC16.64■□□□□ 0.25
Atoh1P48985 Sphk1-206ENSMUST00000106388 1891 ntAPPRIS ALT2 TSL 5 BASIC16.64■□□□□ 0.25
Atoh1P48985 Vmn1r17-204ENSMUST00000228294 2084 ntAPPRIS ALT2 BASIC16.64■□□□□ 0.25
Atoh1P48985 Ebf1-203ENSMUST00000109268 2864 ntAPPRIS ALT1 TSL 5 BASIC16.64■□□□□ 0.25
Atoh1P48985 Elmo2-203ENSMUST00000094329 3466 ntAPPRIS P2 TSL 1 (best) BASIC16.64■□□□□ 0.25
Atoh1P48985 Cacna1b-204ENSMUST00000102939 9736 ntAPPRIS ALT2 TSL 5 BASIC16.64■□□□□ 0.25
Atoh1P48985 Gm19430-201ENSMUST00000193847 2137 ntBASIC16.64■□□□□ 0.25
Atoh1P48985 Ccdc115-201ENSMUST00000042493 1705 ntAPPRIS P1 TSL 1 (best) BASIC16.64■□□□□ 0.25
Atoh1P48985 Shroom4-202ENSMUST00000103005 4839 ntAPPRIS P1 TSL 1 (best) BASIC16.64■□□□□ 0.25
Atoh1P48985 Zbtb11-201ENSMUST00000050248 4920 ntAPPRIS P1 TSL 5 BASIC16.64■□□□□ 0.25
Atoh1P48985 Lhx3-201ENSMUST00000028302 2223 ntAPPRIS P1 TSL 1 (best) BASIC16.64■□□□□ 0.25
Atoh1P48985 Snx17-201ENSMUST00000031029 2018 ntAPPRIS P1 TSL 1 (best) BASIC16.63■□□□□ 0.25
Atoh1P48985 Whrn-206ENSMUST00000102867 4013 ntAPPRIS ALT2 TSL 1 (best) BASIC16.63■□□□□ 0.25
Atoh1P48985 Foxp4-202ENSMUST00000113262 3198 ntAPPRIS ALT2 TSL 1 (best) BASIC16.63■□□□□ 0.25
Atoh1P48985 Dbndd1-201ENSMUST00000176155 1677 ntAPPRIS P1 TSL 1 (best) BASIC16.63■□□□□ 0.25
Atoh1P48985 Wdr70-201ENSMUST00000045766 2126 ntAPPRIS P1 TSL 1 (best) BASIC16.63■□□□□ 0.25
Atoh1P48985 Cdc14b-203ENSMUST00000109770 3052 ntAPPRIS P3 TSL 1 (best) BASIC16.63■□□□□ 0.25
Atoh1P48985 Zmynd15-203ENSMUST00000108563 2649 ntAPPRIS ALT2 TSL 1 (best) BASIC16.63■□□□□ 0.25
Atoh1P48985 Faf1-201ENSMUST00000102724 4468 ntAPPRIS P1 TSL 1 (best) BASIC16.63■□□□□ 0.25
Atoh1P48985 Suco-201ENSMUST00000048377 6327 ntAPPRIS P2 TSL 1 (best) BASIC16.63■□□□□ 0.25
Atoh1P48985 Gfpt1-203ENSMUST00000113657 1200 ntTSL 1 (best) BASIC16.63■□□□□ 0.25
Atoh1P48985 Prcd-202ENSMUST00000116318 799 ntAPPRIS P1 TSL 1 (best) BASIC16.63■□□□□ 0.25
Atoh1P48985 Tmem253-203ENSMUST00000227295 704 ntAPPRIS ALT2 BASIC16.63■□□□□ 0.25
Atoh1P48985 Cnpy2-201ENSMUST00000026446 763 ntAPPRIS P1 TSL 5 BASIC16.63■□□□□ 0.25
Atoh1P48985 1700123K08Rik-201ENSMUST00000031501 1047 ntAPPRIS P1 TSL 1 (best) BASIC16.63■□□□□ 0.25
Atoh1P48985 Rassf8-202ENSMUST00000058538 1131 ntBASIC16.63■□□□□ 0.25
Atoh1P48985 Map6-207ENSMUST00000208924 2906 ntAPPRIS ALT2 TSL 1 (best) BASIC16.63■□□□□ 0.25
Atoh1P48985 Gm5763-201ENSMUST00000155951 1530 ntBASIC16.63■□□□□ 0.25
Atoh1P48985 Stx6-201ENSMUST00000027743 4589 ntAPPRIS P1 TSL 1 (best) BASIC16.63■□□□□ 0.25
Atoh1P48985 Ccdc88a-201ENSMUST00000040182 9376 ntAPPRIS P1 TSL 5 BASIC16.63■□□□□ 0.25
Atoh1P48985 Slmap-203ENSMUST00000102956 5476 ntAPPRIS P3 TSL 5 BASIC16.63■□□□□ 0.25
Atoh1P48985 Haus3-201ENSMUST00000060049 2073 ntAPPRIS P1 TSL 1 (best) BASIC16.63■□□□□ 0.25
Atoh1P48985 Simc1-201ENSMUST00000118072 2116 ntAPPRIS ALT2 TSL 5 BASIC16.63■□□□□ 0.25
Atoh1P48985 Adgrg5-205ENSMUST00000166802 1879 ntAPPRIS ALT2 TSL 1 (best) BASIC16.63■□□□□ 0.25
Atoh1P48985 Plch2-212ENSMUST00000186598 2119 ntTSL 5 BASIC16.63■□□□□ 0.25
Atoh1P48985 9530085L11Rik-201ENSMUST00000203963 2115 ntBASIC16.63■□□□□ 0.25
Atoh1P48985 Snx25-203ENSMUST00000110378 3445 ntAPPRIS ALT2 TSL 5 BASIC16.63■□□□□ 0.25
Atoh1P48985 Lsm1-201ENSMUST00000038421 2663 ntAPPRIS P1 TSL 1 (best) BASIC16.63■□□□□ 0.25
Atoh1P48985 Plbd2-201ENSMUST00000031597 4208 ntAPPRIS P1 TSL 1 (best) BASIC16.62■□□□□ 0.25
Atoh1P48985 Flvcr1-201ENSMUST00000085635 4040 ntAPPRIS P1 TSL 1 (best) BASIC16.62■□□□□ 0.25
Atoh1P48985 Elmo2-202ENSMUST00000074046 3502 ntTSL 1 (best) BASIC16.62■□□□□ 0.25
Atoh1P48985 Cpz-201ENSMUST00000038676 2245 ntAPPRIS P1 TSL 1 (best) BASIC16.62■□□□□ 0.25
Atoh1P48985 Zic3-202ENSMUST00000088629 1951 ntTSL 1 (best) BASIC16.62■□□□□ 0.25
Atoh1P48985 Sesn3-207ENSMUST00000209187 1700 ntTSL 5 BASIC16.62■□□□□ 0.25
Atoh1P48985 Flt1-203ENSMUST00000110529 6292 ntTSL 1 (best) BASIC16.62■□□□□ 0.25
Atoh1P48985 Serf2-204ENSMUST00000139253 3056 ntAPPRIS P1 TSL 1 (best) BASIC16.62■□□□□ 0.25
Atoh1P48985 Tpd52-205ENSMUST00000120143 6317 ntTSL 1 (best) BASIC16.62■□□□□ 0.25
Atoh1P48985 Znrf1-201ENSMUST00000095176 3108 ntAPPRIS P1 TSL 1 (best) BASIC16.62■□□□□ 0.25
Atoh1P48985 Cndp2-202ENSMUST00000168419 2088 ntAPPRIS P1 TSL 1 (best) BASIC16.62■□□□□ 0.25
Atoh1P48985 Arntl2-204ENSMUST00000111639 2923 ntAPPRIS P3 TSL 5 BASIC16.62■□□□□ 0.25
Atoh1P48985 Chic2-201ENSMUST00000075452 9699 ntAPPRIS P1 TSL 1 (best) BASIC16.62■□□□□ 0.25
Atoh1P48985 Gm15678-201ENSMUST00000117573 960 ntBASIC16.62■□□□□ 0.25
Atoh1P48985 Gm12341-201ENSMUST00000119724 503 ntBASIC16.62■□□□□ 0.25
Atoh1P48985 Rab11fip4os2-201ENSMUST00000123067 689 ntTSL 1 (best) BASIC16.62■□□□□ 0.25
Atoh1P48985 Nfya-203ENSMUST00000159063 1255 ntTSL 1 (best) BASIC16.62■□□□□ 0.25
Atoh1P48985 Olfr286-202ENSMUST00000205305 969 ntBASIC16.62■□□□□ 0.25
Atoh1P48985 Gm33045-202ENSMUST00000210049 975 ntTSL 5 BASIC16.62■□□□□ 0.25
Atoh1P48985 Rpl18-208ENSMUST00000211061 552 ntTSL 5 BASIC16.62■□□□□ 0.25
Atoh1P48985 1700067P10Rik-201ENSMUST00000022028 794 ntAPPRIS P1 TSL 1 (best) BASIC16.62■□□□□ 0.25
Atoh1P48985 AC139580.1-202ENSMUST00000223574 928 ntBASIC16.62■□□□□ 0.25
Atoh1P48985 Rnf113a1-201ENSMUST00000046433 1223 ntAPPRIS P1 BASIC16.62■□□□□ 0.25
Atoh1P48985 Swi5-201ENSMUST00000050410 775 ntAPPRIS ALT2 TSL 1 (best) BASIC16.62■□□□□ 0.25
Atoh1P48985 Nfkbie-201ENSMUST00000024742 2422 ntAPPRIS P1 TSL 1 (best) BASIC16.62■□□□□ 0.25
Atoh1P48985 Rita1-201ENSMUST00000031599 1573 ntAPPRIS P1 TSL 1 (best) BASIC16.62■□□□□ 0.25
Atoh1P48985 Ttc13-201ENSMUST00000041614 3038 ntTSL 2 BASIC16.62■□□□□ 0.25
Atoh1P48985 Phtf1-201ENSMUST00000055425 3060 ntTSL 1 (best) BASIC16.62■□□□□ 0.25
Atoh1P48985 Kcna6-204ENSMUST00000185333 5836 ntAPPRIS P1 TSL 1 (best) BASIC16.62■□□□□ 0.25
Atoh1P48985 Syt6-202ENSMUST00000117221 4394 ntTSL 1 (best) BASIC16.62■□□□□ 0.25
Atoh1P48985 App-201ENSMUST00000005406 3176 ntAPPRIS P2 TSL 1 (best) BASIC16.62■□□□□ 0.25
Atoh1P48985 Zkscan3-201ENSMUST00000070785 2561 ntAPPRIS P1 TSL 1 (best) BASIC16.62■□□□□ 0.25
Atoh1P48985 Dynlt1c-201ENSMUST00000092966 2589 ntAPPRIS P1 TSL 1 (best) BASIC16.62■□□□□ 0.25
Atoh1P48985 Hs3st2-201ENSMUST00000084628 2278 ntAPPRIS P1 TSL 1 (best) BASIC16.62■□□□□ 0.25
Atoh1P48985 Tppp3-203ENSMUST00000177126 1396 ntAPPRIS P1 TSL 3 BASIC16.62■□□□□ 0.25
Atoh1P48985 Bicd2-201ENSMUST00000048544 6309 ntAPPRIS P4 TSL 1 (best) BASIC16.62■□□□□ 0.25
Atoh1P48985 Alox12-202ENSMUST00000108574 2314 ntTSL 1 (best) BASIC16.62■□□□□ 0.25
Atoh1P48985 Cdkl3-209ENSMUST00000120374 2770 ntAPPRIS ALT2 TSL 5 BASIC16.61■□□□□ 0.25
Atoh1P48985 Nf2-201ENSMUST00000053079 2470 ntAPPRIS ALT1 TSL 1 (best) BASIC16.61■□□□□ 0.25
Atoh1P48985 Necab3-201ENSMUST00000000895 1829 ntAPPRIS P2 TSL 1 (best) BASIC16.61■□□□□ 0.25
Atoh1P48985 Snap91-204ENSMUST00000098495 4150 ntAPPRIS P4 TSL 1 (best) BASIC16.61■□□□□ 0.25
Atoh1P48985 Tll1-201ENSMUST00000066166 4767 ntAPPRIS P1 TSL 1 (best) BASIC16.61■□□□□ 0.25
Atoh1P48985 Cdca3-201ENSMUST00000024270 1976 ntAPPRIS P1 TSL 1 (best) BASIC16.61■□□□□ 0.25
Atoh1P48985 Zkscan17-202ENSMUST00000101150 3771 ntTSL 1 (best) BASIC16.61■□□□□ 0.25
Atoh1P48985 Mir1982-201ENSMUST00000157368 74 ntBASIC16.61■□□□□ 0.25
Atoh1P48985 Nabp1-202ENSMUST00000185534 708 ntTSL 2 BASIC16.61■□□□□ 0.25
Atoh1P48985 4930500L23Rik-201ENSMUST00000198000 747 ntTSL 1 (best) BASIC16.61■□□□□ 0.25
Atoh1P48985 AC150560.1-201ENSMUST00000227731 1187 ntBASIC16.61■□□□□ 0.25
Atoh1P48985 Ube2i-201ENSMUST00000049911 1138 ntAPPRIS P1 TSL 3 BASIC16.61■□□□□ 0.25
Retrieved 100 of 76,532 protein–RNA pairs in 35.6 ms