Protein–RNA interactions for Protein: P46467

Vps4b, Vacuolar protein sorting-associated protein 4B, mousemouse

Known RBP Predictions only

Length 444 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Vps4bP46467 Tlr2-201ENSMUST00000029623 3014 ntAPPRIS P1 TSL 1 (best) BASIC15.04■□□□□ -0
Vps4bP46467 Cdc37l1-204ENSMUST00000224511 2944 ntAPPRIS ALT2 BASIC15.04■□□□□ -0
Vps4bP46467 Nfe2l1-201ENSMUST00000081775 4654 ntAPPRIS P3 TSL 1 (best) BASIC15.04■□□□□ -0
Vps4bP46467 Irf2bpl-201ENSMUST00000038422 4098 ntAPPRIS P1 BASIC15.04■□□□□ -0
Vps4bP46467 Lancl3-201ENSMUST00000069763 3991 ntAPPRIS P1 TSL 1 (best) BASIC15.04■□□□□ -0
Vps4bP46467 Pld3-202ENSMUST00000117611 2297 ntAPPRIS P1 TSL 1 (best) BASIC15.04■□□□□ -0
Vps4bP46467 Itsn1-202ENSMUST00000064797 7418 ntAPPRIS ALT2 TSL 5 BASIC15.04■□□□□ -0
Vps4bP46467 4930402H24Rik-202ENSMUST00000110243 1984 ntAPPRIS ALT2 TSL 1 (best) BASIC15.04■□□□□ -0
Vps4bP46467 Map6d1-201ENSMUST00000040880 3273 ntAPPRIS P1 TSL 1 (best) BASIC15.04■□□□□ -0
Vps4bP46467 Ralgapb-201ENSMUST00000046274 8366 ntAPPRIS ALT1 TSL 5 BASIC15.04■□□□□ -0
Vps4bP46467 Ap5m1-205ENSMUST00000227431 3757 ntBASIC15.03■□□□□ -0
Vps4bP46467 Mycbpap-201ENSMUST00000040692 1512 ntTSL 1 (best) BASIC15.03■□□□□ -0
Vps4bP46467 Isoc2a-201ENSMUST00000125249 2244 ntAPPRIS P1 TSL 1 (best) BASIC15.03■□□□□ -0
Vps4bP46467 Cpsf6-206ENSMUST00000176670 2227 ntTSL 5 BASIC15.03■□□□□ -0
Vps4bP46467 4930528D03Rik-201ENSMUST00000181528 1339 ntTSL 1 (best) BASIC15.03■□□□□ -0
Vps4bP46467 Prss45-202ENSMUST00000146794 1208 ntAPPRIS ALT2 TSL 1 (best) BASIC15.03■□□□□ -0
Vps4bP46467 Dgcr6-208ENSMUST00000153123 920 ntTSL 1 (best) BASIC15.03■□□□□ -0
Vps4bP46467 Sardhos-201ENSMUST00000170435 265 ntTSL 3 BASIC15.03■□□□□ -0
Vps4bP46467 Washc3-202ENSMUST00000171151 837 ntTSL 1 (best) BASIC15.03■□□□□ -0
Vps4bP46467 Gm26549-201ENSMUST00000181112 1209 ntTSL 1 (best) BASIC15.03■□□□□ -0
Vps4bP46467 Gm6550-201ENSMUST00000187574 993 ntBASIC15.03■□□□□ -0
Vps4bP46467 Hmgb1-rs17-201ENSMUST00000210634 972 ntBASIC15.03■□□□□ -0
Vps4bP46467 Pard6a-204ENSMUST00000212352 1234 ntTSL 2 BASIC15.03■□□□□ -0
Vps4bP46467 Rgp1-201ENSMUST00000030190 1292 ntAPPRIS P1 TSL 1 (best) BASIC15.03■□□□□ -0
Vps4bP46467 Ndufb7-201ENSMUST00000036996 623 ntAPPRIS P1 TSL 1 (best) BASIC15.03■□□□□ -0
Vps4bP46467 Pcdh10-204ENSMUST00000193252 4638 ntAPPRIS ALT2 BASIC15.03■□□□□ -0
Vps4bP46467 Fbxo27-202ENSMUST00000108280 2031 ntTSL 1 (best) BASIC15.03■□□□□ -0
Vps4bP46467 Smtnl2-202ENSMUST00000108500 3572 ntAPPRIS ALT2 TSL 1 (best) BASIC15.03■□□□□ -0
Vps4bP46467 Slc39a13-202ENSMUST00000079976 1884 ntTSL 1 (best) BASIC15.03■□□□□ -0
Vps4bP46467 Synj1-203ENSMUST00000121759 7090 ntAPPRIS P4 TSL 5 BASIC15.03■□□□□ -0
Vps4bP46467 Nyap1-201ENSMUST00000061789 3912 ntAPPRIS P3 TSL 5 BASIC15.03■□□□□ -0
Vps4bP46467 Trim3-205ENSMUST00000147044 2972 ntAPPRIS P1 TSL 1 (best) BASIC15.03■□□□□ -0
Vps4bP46467 Scube2-203ENSMUST00000106729 3563 ntAPPRIS P2 TSL 1 (best) BASIC15.03■□□□□ -0
Vps4bP46467 Fam169b-206ENSMUST00000210558 2815 ntAPPRIS ALT2 TSL 5 BASIC15.02■□□□□ -0
Vps4bP46467 Mpp3-201ENSMUST00000062801 2848 ntAPPRIS P1 TSL 1 (best) BASIC15.02■□□□□ -0
Vps4bP46467 Arl6ip1-201ENSMUST00000032888 2171 ntAPPRIS P1 TSL 1 (best) BASIC15.02■□□□□ -0
Vps4bP46467 Slc44a3-201ENSMUST00000039197 2620 ntAPPRIS P1 TSL 1 (best) BASIC15.02■□□□□ -0
Vps4bP46467 1700012B07Rik-202ENSMUST00000106674 2035 ntAPPRIS P4 TSL 1 (best) BASIC15.02■□□□□ -0
Vps4bP46467 Tinf2-205ENSMUST00000227842 2001 ntAPPRIS ALT2 BASIC15.02■□□□□ -0
Vps4bP46467 Irf3-201ENSMUST00000003284 2031 ntAPPRIS P1 TSL 1 (best) BASIC15.02■□□□□ -0
Vps4bP46467 Elfn2-201ENSMUST00000088592 4846 ntAPPRIS P1 TSL 1 (best) BASIC15.02■□□□□ -0
Vps4bP46467 Mtfr2-201ENSMUST00000169712 1991 ntAPPRIS P1 TSL 1 (best) BASIC15.02■□□□□ -0
Vps4bP46467 Pcdha12-201ENSMUST00000047614 5335 ntAPPRIS P1 TSL 1 (best) BASIC15.02■□□□□ -0
Vps4bP46467 Emp2-201ENSMUST00000078357 3440 ntAPPRIS P1 TSL 1 (best) BASIC15.02■□□□□ -0
Vps4bP46467 Nkain4-202ENSMUST00000108873 865 ntAPPRIS ALT2 TSL 1 (best) BASIC15.02■□□□□ -0
Vps4bP46467 Rasgrp2-205ENSMUST00000113471 535 ntTSL 1 (best) BASIC15.02■□□□□ -0
Vps4bP46467 Ubl5-204ENSMUST00000160682 489 ntAPPRIS P1 TSL 5 BASIC15.02■□□□□ -0
Vps4bP46467 Sap25-206ENSMUST00000177466 1005 ntAPPRIS ALT2 TSL 5 BASIC15.02■□□□□ -0
Vps4bP46467 Rpsa-ps1-201ENSMUST00000191040 886 ntBASIC15.02■□□□□ -0
Vps4bP46467 Gm28411-202ENSMUST00000191318 464 ntTSL 1 (best) BASIC15.02■□□□□ -0
Vps4bP46467 Smim4-204ENSMUST00000203261 1219 ntTSL 1 (best) BASIC15.02■□□□□ -0
Vps4bP46467 AC164567.1-201ENSMUST00000219185 960 ntBASIC15.02■□□□□ -0
Vps4bP46467 AC161829.1-201ENSMUST00000220298 281 ntBASIC15.02■□□□□ -0
Vps4bP46467 Lrr1-203ENSMUST00000222520 767 ntTSL 1 (best) BASIC15.02■□□□□ -0
Vps4bP46467 AC138767.1-201ENSMUST00000222661 415 ntBASIC15.02■□□□□ -0
Vps4bP46467 Cdpf1-201ENSMUST00000071876 997 ntAPPRIS P1 TSL 1 (best) BASIC15.02■□□□□ -0
Vps4bP46467 D930028M14Rik-201ENSMUST00000098678 1003 ntTSL 2 BASIC15.02■□□□□ -0
Vps4bP46467 Lap3-201ENSMUST00000046122 2267 ntAPPRIS P1 TSL 1 (best) BASIC15.02□□□□□ -0.01
Vps4bP46467 Gpr146-201ENSMUST00000051293 4157 ntAPPRIS P1 TSL 1 (best) BASIC15.02□□□□□ -0.01
Vps4bP46467 Cbfa2t3-201ENSMUST00000006525 3161 ntAPPRIS ALT2 TSL 2 BASIC15.02□□□□□ -0.01
Vps4bP46467 Edem3-204ENSMUST00000191070 3127 ntTSL 1 (best) BASIC15.02□□□□□ -0.01
Vps4bP46467 Wdr31-203ENSMUST00000120095 2549 ntAPPRIS P3 TSL 1 (best) BASIC15.02□□□□□ -0.01
Vps4bP46467 Kcnf1-201ENSMUST00000170580 4789 ntAPPRIS P1 BASIC15.02□□□□□ -0.01
Vps4bP46467 Nupl2-201ENSMUST00000049887 2914 ntAPPRIS P1 TSL 1 (best) BASIC15.02□□□□□ -0.01
Vps4bP46467 Epb41l1-205ENSMUST00000109574 5904 ntTSL 1 (best) BASIC15.02□□□□□ -0.01
Vps4bP46467 Tnfsf13-202ENSMUST00000108648 1503 ntAPPRIS ALT2 TSL 5 BASIC15.02□□□□□ -0.01
Vps4bP46467 Cnih1-201ENSMUST00000015903 1538 ntAPPRIS P1 TSL 1 (best) BASIC15.02□□□□□ -0.01
Vps4bP46467 Btd-201ENSMUST00000090147 2324 ntAPPRIS P1 TSL 1 (best) BASIC15.01□□□□□ -0.01
Vps4bP46467 Stap2-201ENSMUST00000043785 1491 ntAPPRIS P1 TSL 1 (best) BASIC15.01□□□□□ -0.01
Vps4bP46467 Ralgds-201ENSMUST00000028170 3590 ntAPPRIS P3 TSL 1 (best) BASIC15.01□□□□□ -0.01
Vps4bP46467 Syn2-201ENSMUST00000009538 2708 ntAPPRIS P4 TSL 1 (best) BASIC15.01□□□□□ -0.01
Vps4bP46467 Scube1-201ENSMUST00000016907 3991 ntAPPRIS ALT2 TSL 1 (best) BASIC15.01□□□□□ -0.01
Vps4bP46467 Lmf1-202ENSMUST00000116641 1858 ntAPPRIS P2 TSL 5 BASIC15.01□□□□□ -0.01
Vps4bP46467 Ccer1-201ENSMUST00000060703 1865 ntAPPRIS P1 BASIC15.01□□□□□ -0.01
Vps4bP46467 Lmf1-201ENSMUST00000063344 1861 ntAPPRIS ALT2 TSL 5 BASIC15.01□□□□□ -0.01
Vps4bP46467 Txnrd1-206ENSMUST00000219442 3531 ntAPPRIS P1 TSL 5 BASIC15.01□□□□□ -0.01
Vps4bP46467 Wnt11-201ENSMUST00000067495 3451 ntAPPRIS P1 TSL 5 BASIC15.01□□□□□ -0.01
Vps4bP46467 1700022A21Rik-202ENSMUST00000182910 1448 ntTSL 1 (best) BASIC15.01□□□□□ -0.01
Vps4bP46467 Tomm70a-201ENSMUST00000166897 3778 ntAPPRIS P1 TSL 1 (best) BASIC15.01□□□□□ -0.01
Vps4bP46467 Rad51-201ENSMUST00000028795 3368 ntAPPRIS P1 TSL 1 (best) BASIC15.01□□□□□ -0.01
Vps4bP46467 Tmem241-202ENSMUST00000055447 2597 ntAPPRIS ALT2 TSL 1 (best) BASIC15.01□□□□□ -0.01
Vps4bP46467 Gm20708-201ENSMUST00000132298 1780 ntAPPRIS P1 TSL 2 BASIC15.01□□□□□ -0.01
Vps4bP46467 Fuca1-201ENSMUST00000030434 2525 ntAPPRIS P1 TSL 1 (best) BASIC15.01□□□□□ -0.01
Vps4bP46467 Chmp1a-201ENSMUST00000000759 2140 ntAPPRIS P1 TSL 1 (best) BASIC15.01□□□□□ -0.01
Vps4bP46467 Fam228b-201ENSMUST00000053458 2851 ntAPPRIS P2 TSL 1 (best) BASIC15.01□□□□□ -0.01
Vps4bP46467 Gm42632-201ENSMUST00000201707 2411 ntBASIC15.01□□□□□ -0.01
Vps4bP46467 Nup88-202ENSMUST00000108530 2389 ntAPPRIS P1 TSL 1 (best) BASIC15.01□□□□□ -0.01
Vps4bP46467 Park7-203ENSMUST00000105674 937 ntAPPRIS P1 TSL 5 BASIC15.01□□□□□ -0.01
Vps4bP46467 Gm15173-201ENSMUST00000122049 433 ntBASIC15.01□□□□□ -0.01
Vps4bP46467 Gm11536-201ENSMUST00000130733 535 ntTSL 1 (best) BASIC15.01□□□□□ -0.01
Vps4bP46467 Tac4-201ENSMUST00000021242 1251 ntAPPRIS P1 TSL 1 (best) BASIC15.01□□□□□ -0.01
Vps4bP46467 1700037H04Rik-201ENSMUST00000028800 832 ntAPPRIS ALT1 TSL 1 (best) BASIC15.01□□□□□ -0.01
Vps4bP46467 Ly6k-201ENSMUST00000060301 791 ntAPPRIS P1 TSL 1 (best) BASIC15.01□□□□□ -0.01
Vps4bP46467 Zfp90-203ENSMUST00000212606 2685 ntTSL 1 (best) BASIC15.01□□□□□ -0.01
Vps4bP46467 Adam23-205ENSMUST00000114107 6110 ntAPPRIS ALT2 TSL 5 BASIC15.01□□□□□ -0.01
Vps4bP46467 Gm5934-201ENSMUST00000120734 2588 ntAPPRIS P1 TSL 5 BASIC15.01□□□□□ -0.01
Vps4bP46467 Ptpn6-203ENSMUST00000171549 2226 ntAPPRIS ALT2 TSL 1 (best) BASIC15.01□□□□□ -0.01
Vps4bP46467 Tchp-201ENSMUST00000094441 2882 ntAPPRIS P1 TSL 1 (best) BASIC15.01□□□□□ -0.01
Vps4bP46467 Chd1-205ENSMUST00000173311 4211 ntTSL 1 (best) BASIC15.01□□□□□ -0.01
Vps4bP46467 Rest-202ENSMUST00000113449 6924 ntAPPRIS P1 TSL 1 (best) BASIC15.01□□□□□ -0.01
Retrieved 100 of 76,532 protein–RNA pairs in 38.8 ms