Protein–RNA interactions for Protein: P43688

Nkx2-6, Homeobox protein Nkx-2.6, mousemouse

Predictions only

Length 289 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Nkx2-6P43688 Gm37736-201ENSMUST00000193564 2802 ntBASIC14.02□□□□□ -0.16
Nkx2-6P43688 Cep55-203ENSMUST00000169673 2761 ntAPPRIS ALT2 TSL 1 (best) BASIC14.02□□□□□ -0.16
Nkx2-6P43688 Sorbs1-208ENSMUST00000224247 2688 ntAPPRIS ALT2 BASIC14.02□□□□□ -0.16
Nkx2-6P43688 Cmtm1-202ENSMUST00000160596 1900 ntAPPRIS ALT2 TSL 5 BASIC14.02□□□□□ -0.16
Nkx2-6P43688 Catip-204ENSMUST00000191010 1866 ntAPPRIS ALT2 TSL 1 (best) BASIC14.02□□□□□ -0.16
Nkx2-6P43688 Plppr2-202ENSMUST00000188468 1480 ntAPPRIS ALT2 TSL 5 BASIC14.02□□□□□ -0.16
Nkx2-6P43688 Fam102a-201ENSMUST00000048375 4223 ntAPPRIS P1 TSL 1 (best) BASIC14.02□□□□□ -0.16
Nkx2-6P43688 Casc4-201ENSMUST00000078752 4215 ntTSL 1 (best) BASIC14.02□□□□□ -0.16
Nkx2-6P43688 AC159621.2-201ENSMUST00000223519 1326 ntBASIC14.02□□□□□ -0.17
Nkx2-6P43688 Sept1-201ENSMUST00000106313 1285 ntAPPRIS ALT2 TSL 5 BASIC14.02□□□□□ -0.17
Nkx2-6P43688 Oaz2-204ENSMUST00000136166 700 ntTSL 5 BASIC14.02□□□□□ -0.17
Nkx2-6P43688 Mvk-206ENSMUST00000137167 1049 ntTSL 2 BASIC14.02□□□□□ -0.17
Nkx2-6P43688 Gm20509-201ENSMUST00000174203 1016 ntAPPRIS P1 TSL 5 BASIC14.02□□□□□ -0.17
Nkx2-6P43688 Gm27164-201ENSMUST00000184359 723 ntTSL 1 (best) BASIC14.02□□□□□ -0.17
Nkx2-6P43688 Gm27321-201ENSMUST00000185021 205 ntBASIC14.02□□□□□ -0.17
Nkx2-6P43688 Gm39228-201ENSMUST00000212456 301 ntTSL 5 BASIC14.02□□□□□ -0.17
Nkx2-6P43688 Ndufs6-203ENSMUST00000222930 512 ntTSL 3 BASIC14.02□□□□□ -0.17
Nkx2-6P43688 Runx2-213ENSMUST00000162878 2987 ntTSL 1 (best) BASIC14.02□□□□□ -0.17
Nkx2-6P43688 Phldb1-211ENSMUST00000135436 2844 ntTSL 1 (best) BASIC14.02□□□□□ -0.17
Nkx2-6P43688 Pccb-201ENSMUST00000035116 2320 ntAPPRIS P1 TSL 1 (best) BASIC14.02□□□□□ -0.17
Nkx2-6P43688 Slc4a1ap-206ENSMUST00000201858 2109 ntAPPRIS ALT2 TSL 1 (best) BASIC14.02□□□□□ -0.17
Nkx2-6P43688 Rbpms2-202ENSMUST00000169003 1803 ntAPPRIS ALT2 TSL 1 (best) BASIC14.01□□□□□ -0.17
Nkx2-6P43688 Apoa4-201ENSMUST00000034585 1815 ntAPPRIS P1 TSL 1 (best) BASIC14.01□□□□□ -0.17
Nkx2-6P43688 Dab2ip-202ENSMUST00000091010 6455 ntAPPRIS ALT2 TSL 1 (best) BASIC14.01□□□□□ -0.17
Nkx2-6P43688 Ntng1-205ENSMUST00000106575 1620 ntAPPRIS ALT1 TSL 5 BASIC14.01□□□□□ -0.17
Nkx2-6P43688 Trappc2-203ENSMUST00000116495 1613 ntAPPRIS P1 TSL 1 (best) BASIC14.01□□□□□ -0.17
Nkx2-6P43688 Eif2b2-201ENSMUST00000004910 1605 ntAPPRIS P1 TSL 1 (best) BASIC14.01□□□□□ -0.17
Nkx2-6P43688 Ntng1-202ENSMUST00000072596 1620 ntAPPRIS P2 TSL 1 (best) BASIC14.01□□□□□ -0.17
Nkx2-6P43688 Tbc1d1-203ENSMUST00000119756 4760 ntAPPRIS ALT2 TSL 1 (best) BASIC14.01□□□□□ -0.17
Nkx2-6P43688 Ntng2-204ENSMUST00000102873 1593 ntAPPRIS ALT2 TSL 1 (best) BASIC14.01□□□□□ -0.17
Nkx2-6P43688 Poli-201ENSMUST00000043286 2591 ntTSL 1 (best) BASIC14.01□□□□□ -0.17
Nkx2-6P43688 Gm42893-201ENSMUST00000198035 1502 ntTSL 3 BASIC14.01□□□□□ -0.17
Nkx2-6P43688 Kcnn1-208ENSMUST00000212611 2528 ntAPPRIS P2 TSL 1 (best) BASIC14.01□□□□□ -0.17
Nkx2-6P43688 Gm12522-201ENSMUST00000142833 2439 ntTSL 1 (best) BASIC14.01□□□□□ -0.17
Nkx2-6P43688 Cilp2-201ENSMUST00000057831 4314 ntAPPRIS P1 TSL 5 BASIC14.01□□□□□ -0.17
Nkx2-6P43688 Fam172a-203ENSMUST00000163257 1436 ntAPPRIS P4 TSL 5 BASIC14.01□□□□□ -0.17
Nkx2-6P43688 AI661453-201ENSMUST00000037701 1410 ntAPPRIS ALT2 TSL 1 (best) BASIC14.01□□□□□ -0.17
Nkx2-6P43688 Gm43352-201ENSMUST00000196419 3065 ntBASIC14.01□□□□□ -0.17
Nkx2-6P43688 Gm3054-201ENSMUST00000111075 265 ntTSL 5 BASIC14.01□□□□□ -0.17
Nkx2-6P43688 Ninj2-202ENSMUST00000112711 853 ntAPPRIS P3 TSL 1 (best) BASIC14.01□□□□□ -0.17
Nkx2-6P43688 Eef1akmt4-201ENSMUST00000115522 1130 ntAPPRIS P1 TSL 1 (best) BASIC14.01□□□□□ -0.17
Nkx2-6P43688 2310061I04Rik-204ENSMUST00000148721 1293 ntAPPRIS P1 TSL 5 BASIC14.01□□□□□ -0.17
Nkx2-6P43688 AC155937.1-202ENSMUST00000156229 621 ntAPPRIS P1 TSL 2 BASIC14.01□□□□□ -0.17
Nkx2-6P43688 Gm8116-201ENSMUST00000182917 1201 ntBASIC14.01□□□□□ -0.17
Nkx2-6P43688 Commd9-201ENSMUST00000028584 1191 ntAPPRIS P1 TSL 1 (best) BASIC14.01□□□□□ -0.17
Nkx2-6P43688 Selenov-201ENSMUST00000056589 1267 ntAPPRIS P1 TSL 1 (best) BASIC14.01□□□□□ -0.17
Nkx2-6P43688 Elmo2-202ENSMUST00000074046 3502 ntTSL 1 (best) BASIC14.01□□□□□ -0.17
Nkx2-6P43688 Ldb3-208ENSMUST00000228044 1883 ntAPPRIS ALT2 BASIC14.01□□□□□ -0.17
Nkx2-6P43688 Paqr9-201ENSMUST00000079597 8367 ntAPPRIS P1 BASIC14.01□□□□□ -0.17
Nkx2-6P43688 Gpr135-201ENSMUST00000050649 3150 ntAPPRIS P1 BASIC14.01□□□□□ -0.17
Nkx2-6P43688 Col2a1-201ENSMUST00000023123 5104 ntTSL 1 (best) BASIC14.01□□□□□ -0.17
Nkx2-6P43688 Ggnbp2-213ENSMUST00000172405 2950 ntAPPRIS P2 TSL 1 (best) BASIC14.01□□□□□ -0.17
Nkx2-6P43688 Krt74-201ENSMUST00000088018 1648 ntAPPRIS P1 TSL 2 BASIC14.01□□□□□ -0.17
Nkx2-6P43688 Gjd2-201ENSMUST00000090275 2879 ntAPPRIS P1 TSL 1 (best) BASIC14.01□□□□□ -0.17
Nkx2-6P43688 Sympk-201ENSMUST00000023882 4116 ntAPPRIS P1 TSL 1 (best) BASIC14□□□□□ -0.17
Nkx2-6P43688 Csnk1g1-212ENSMUST00000206048 2073 ntAPPRIS ALT2 TSL 5 BASIC14□□□□□ -0.17
Nkx2-6P43688 Dsn1-202ENSMUST00000103130 2636 ntAPPRIS P1 TSL 1 (best) BASIC14□□□□□ -0.17
Nkx2-6P43688 Dlgap1-207ENSMUST00000133983 7173 ntAPPRIS ALT2 TSL 1 (best) BASIC14□□□□□ -0.17
Nkx2-6P43688 Usp43-201ENSMUST00000021288 4462 ntAPPRIS P3 TSL 1 (best) BASIC14□□□□□ -0.17
Nkx2-6P43688 Gm3045-201ENSMUST00000212844 1825 ntAPPRIS P1 TSL 5 BASIC14□□□□□ -0.17
Nkx2-6P43688 Metrnl-202ENSMUST00000106089 1101 ntAPPRIS ALT2 TSL 5 BASIC14□□□□□ -0.17
Nkx2-6P43688 Rpl9-202ENSMUST00000118543 1193 ntTSL 2 BASIC14□□□□□ -0.17
Nkx2-6P43688 Gm14104-201ENSMUST00000135990 356 ntTSL 5 BASIC14□□□□□ -0.17
Nkx2-6P43688 Gm25144-201ENSMUST00000179561 110 ntBASIC14□□□□□ -0.17
Nkx2-6P43688 Gm25352-201ENSMUST00000179815 110 ntBASIC14□□□□□ -0.17
Nkx2-6P43688 1700021A07Rik-203ENSMUST00000188024 404 ntTSL 3 BASIC14□□□□□ -0.17
Nkx2-6P43688 Gm18049-201ENSMUST00000208909 581 ntBASIC14□□□□□ -0.17
Nkx2-6P43688 Tex12-201ENSMUST00000034568 895 ntAPPRIS P1 TSL 1 (best) BASIC14□□□□□ -0.17
Nkx2-6P43688 Trnt1-201ENSMUST00000057578 2283 ntAPPRIS P1 TSL 1 (best) BASIC14□□□□□ -0.17
Nkx2-6P43688 Nkain2-203ENSMUST00000191234 3760 ntAPPRIS P1 TSL 1 (best) BASIC14□□□□□ -0.17
Nkx2-6P43688 Dact1-201ENSMUST00000061273 3650 ntTSL 1 (best) BASIC14□□□□□ -0.17
Nkx2-6P43688 Pam-210ENSMUST00000161567 3630 ntAPPRIS ALT2 TSL 5 BASIC14□□□□□ -0.17
Nkx2-6P43688 Lrrc56-201ENSMUST00000047093 2197 ntAPPRIS P3 TSL 1 (best) BASIC14□□□□□ -0.17
Nkx2-6P43688 Rtn1-202ENSMUST00000078505 3629 ntTSL 1 (best) BASIC14□□□□□ -0.17
Nkx2-6P43688 Gm15939-201ENSMUST00000160756 2147 ntTSL 5 BASIC14□□□□□ -0.17
Nkx2-6P43688 Rsu1-202ENSMUST00000114791 1604 ntTSL 5 BASIC14□□□□□ -0.17
Nkx2-6P43688 G2e3-202ENSMUST00000119211 2926 ntAPPRIS ALT2 TSL 1 (best) BASIC14□□□□□ -0.17
Nkx2-6P43688 Tmod2-207ENSMUST00000215462 1564 ntTSL 1 (best) BASIC14□□□□□ -0.17
Nkx2-6P43688 Washc1-201ENSMUST00000072383 2904 ntAPPRIS P1 TSL 1 (best) BASIC14□□□□□ -0.17
Nkx2-6P43688 Supt5-208ENSMUST00000209141 3755 ntAPPRIS P1 TSL 1 (best) BASIC14□□□□□ -0.17
Nkx2-6P43688 Tpbg-201ENSMUST00000006559 3603 ntAPPRIS P1 TSL 1 (best) BASIC14□□□□□ -0.17
Nkx2-6P43688 Gm13517-201ENSMUST00000120782 1495 ntBASIC13.99□□□□□ -0.17
Nkx2-6P43688 Esr1-202ENSMUST00000105588 2733 ntTSL 5 BASIC13.99□□□□□ -0.17
Nkx2-6P43688 Adrb3-203ENSMUST00000121838 1864 ntAPPRIS P2 TSL 1 (best) BASIC13.99□□□□□ -0.17
Nkx2-6P43688 Fastk-203ENSMUST00000115043 3056 ntTSL 1 (best) BASIC13.99□□□□□ -0.17
Nkx2-6P43688 Egfl7-202ENSMUST00000102907 1372 ntAPPRIS P4 TSL 1 (best) BASIC13.99□□□□□ -0.17
Nkx2-6P43688 Grin1os-201ENSMUST00000129723 2891 ntTSL 1 (best) BASIC13.99□□□□□ -0.17
Nkx2-6P43688 P2rx3-203ENSMUST00000111616 1315 ntTSL 5 BASIC13.99□□□□□ -0.17
Nkx2-6P43688 4833422C13Rik-201ENSMUST00000099331 2083 ntTSL 1 (best) BASIC13.99□□□□□ -0.17
Nkx2-6P43688 Dyrk3-201ENSMUST00000016670 3164 ntAPPRIS P1 TSL 1 (best) BASIC13.99□□□□□ -0.17
Nkx2-6P43688 Cadm2-203ENSMUST00000120898 2768 ntTSL 1 (best) BASIC13.99□□□□□ -0.17
Nkx2-6P43688 Eif2b1-201ENSMUST00000031334 2013 ntAPPRIS P1 TSL 1 (best) BASIC13.99□□□□□ -0.17
Nkx2-6P43688 Gm28050-201ENSMUST00000124394 449 ntTSL 1 (best) BASIC13.99□□□□□ -0.17
Nkx2-6P43688 Gm15199-201ENSMUST00000129933 542 ntTSL 1 (best) BASIC13.99□□□□□ -0.17
Nkx2-6P43688 Gm11682-201ENSMUST00000144689 516 ntTSL 3 BASIC13.99□□□□□ -0.17
Nkx2-6P43688 Gm15458-201ENSMUST00000156950 709 ntTSL 5 BASIC13.99□□□□□ -0.17
Nkx2-6P43688 Gm15825-201ENSMUST00000159108 918 ntTSL 1 (best) BASIC13.99□□□□□ -0.17
Nkx2-6P43688 2010015M23Rik-201ENSMUST00000181900 1199 ntTSL 1 (best) BASIC13.99□□□□□ -0.17
Nkx2-6P43688 Gm28277-201ENSMUST00000187450 885 ntTSL 3 BASIC13.99□□□□□ -0.17
Nkx2-6P43688 Gm8597-201ENSMUST00000191525 1109 ntBASIC13.99□□□□□ -0.17
Retrieved 100 of 76,532 protein–RNA pairs in 36.8 ms