Protein–RNA interactions for Protein: P43277

Hist1h1d, Histone H1.3, mousemouse

Known RBP Predictions only

Length 221 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Hist1h1dP43277 Ttll11-201ENSMUST00000028248 3176 ntAPPRIS P2 TSL 1 (best) BASIC12.57□□□□□ -0.4
Hist1h1dP43277 Nkd2-202ENSMUST00000118096 2801 ntAPPRIS ALT2 TSL 1 (best) BASIC12.57□□□□□ -0.4
Hist1h1dP43277 Myh14-201ENSMUST00000048102 6457 ntAPPRIS ALT2 TSL 1 (best) BASIC12.56□□□□□ -0.4
Hist1h1dP43277 Ube2j2-203ENSMUST00000105581 1391 ntAPPRIS P1 TSL 1 (best) BASIC12.56□□□□□ -0.4
Hist1h1dP43277 Hist1h1e-201ENSMUST00000062045 1930 ntAPPRIS P1 BASIC12.56□□□□□ -0.4
Hist1h1dP43277 Adprh-201ENSMUST00000002923 1583 ntAPPRIS P1 TSL 1 (best) BASIC12.56□□□□□ -0.4
Hist1h1dP43277 Ttll5-203ENSMUST00000095536 4150 ntAPPRIS ALT2 TSL 2 BASIC12.56□□□□□ -0.4
Hist1h1dP43277 Zcchc3-201ENSMUST00000099207 3073 ntAPPRIS P1 BASIC12.56□□□□□ -0.4
Hist1h1dP43277 Ccny-201ENSMUST00000053917 4017 ntAPPRIS P1 TSL 1 (best) BASIC12.56□□□□□ -0.4
Hist1h1dP43277 Pisd-201ENSMUST00000061895 2183 ntAPPRIS P3 TSL 1 (best) BASIC12.56□□□□□ -0.4
Hist1h1dP43277 Grk6-202ENSMUST00000099482 2169 ntAPPRIS P3 TSL 1 (best) BASIC12.56□□□□□ -0.4
Hist1h1dP43277 Gatm-201ENSMUST00000028624 2389 ntAPPRIS P1 TSL 1 (best) BASIC12.56□□□□□ -0.4
Hist1h1dP43277 Ppp1r1b-206ENSMUST00000150762 1801 ntTSL 1 (best) BASIC12.56□□□□□ -0.4
Hist1h1dP43277 Myo1c-204ENSMUST00000108431 4718 ntAPPRIS P2 TSL 1 (best) BASIC12.56□□□□□ -0.4
Hist1h1dP43277 Nr2e3-201ENSMUST00000034831 2037 ntAPPRIS P1 TSL 1 (best) BASIC12.56□□□□□ -0.4
Hist1h1dP43277 Aggf1-201ENSMUST00000022189 3249 ntAPPRIS P1 TSL 1 (best) BASIC12.56□□□□□ -0.4
Hist1h1dP43277 Nat9-203ENSMUST00000103040 1204 ntAPPRIS P1 TSL 1 (best) BASIC12.56□□□□□ -0.4
Hist1h1dP43277 Nat9-204ENSMUST00000103041 953 ntAPPRIS P1 TSL 5 BASIC12.56□□□□□ -0.4
Hist1h1dP43277 Alkal1-201ENSMUST00000133144 971 ntAPPRIS P1 TSL 1 (best) BASIC12.56□□□□□ -0.4
Hist1h1dP43277 BC022687-202ENSMUST00000177808 1207 ntAPPRIS P1 TSL 1 (best) BASIC12.56□□□□□ -0.4
Hist1h1dP43277 Gm40457-201ENSMUST00000205319 1174 ntTSL 5 BASIC12.56□□□□□ -0.4
Hist1h1dP43277 Gm26646-202ENSMUST00000205705 439 ntTSL 5 BASIC12.56□□□□□ -0.4
Hist1h1dP43277 Csrp2-207ENSMUST00000220409 780 ntTSL 2 BASIC12.56□□□□□ -0.4
Hist1h1dP43277 Rbfox2-207ENSMUST00000227533 1041 ntBASIC12.56□□□□□ -0.4
Hist1h1dP43277 Zfp524-201ENSMUST00000086349 1142 ntAPPRIS P1 TSL 1 (best) BASIC12.56□□□□□ -0.4
Hist1h1dP43277 Raver1-202ENSMUST00000217282 4234 ntAPPRIS ALT2 TSL 2 BASIC12.56□□□□□ -0.4
Hist1h1dP43277 Cd82-202ENSMUST00000099696 1657 ntAPPRIS P1 TSL 1 (best) BASIC12.56□□□□□ -0.4
Hist1h1dP43277 Skap1-205ENSMUST00000107662 1861 ntTSL 1 (best) BASIC12.56□□□□□ -0.4
Hist1h1dP43277 Cpne1-203ENSMUST00000109608 3492 ntAPPRIS P1 TSL 1 (best) BASIC12.56□□□□□ -0.4
Hist1h1dP43277 Col2a1-202ENSMUST00000088355 4862 ntAPPRIS P1 TSL 1 (best) BASIC12.56□□□□□ -0.4
Hist1h1dP43277 Rbbp8nl-201ENSMUST00000038529 2319 ntAPPRIS P1 TSL 1 (best) BASIC12.56□□□□□ -0.4
Hist1h1dP43277 Robo4-205ENSMUST00000214185 4952 ntAPPRIS ALT2 TSL 1 (best) BASIC12.56□□□□□ -0.4
Hist1h1dP43277 Agap1-201ENSMUST00000027521 11921 ntAPPRIS P4 TSL 1 (best) BASIC12.56□□□□□ -0.4
Hist1h1dP43277 Las1l-202ENSMUST00000113864 2581 ntAPPRIS ALT2 TSL 5 BASIC12.56□□□□□ -0.4
Hist1h1dP43277 Dab1-203ENSMUST00000106830 5278 ntAPPRIS P1 TSL 1 (best) BASIC12.56□□□□□ -0.4
Hist1h1dP43277 Sphk1-205ENSMUST00000106387 1957 ntAPPRIS ALT2 TSL 5 BASIC12.56□□□□□ -0.4
Hist1h1dP43277 Mcrs1-202ENSMUST00000163506 1795 ntTSL 1 (best) BASIC12.56□□□□□ -0.4
Hist1h1dP43277 Myocd-202ENSMUST00000102635 4935 ntAPPRIS P3 TSL 1 (best) BASIC12.56□□□□□ -0.4
Hist1h1dP43277 Slc22a18-202ENSMUST00000105917 1552 ntAPPRIS P1 TSL 1 (best) BASIC12.56□□□□□ -0.4
Hist1h1dP43277 Sumo3-201ENSMUST00000020501 2630 ntAPPRIS P3 TSL 1 (best) BASIC12.56□□□□□ -0.4
Hist1h1dP43277 Gstt2-201ENSMUST00000038257 1370 ntAPPRIS P1 TSL 1 (best) BASIC12.56□□□□□ -0.4
Hist1h1dP43277 Smg9-201ENSMUST00000002280 2242 ntAPPRIS P1 TSL 1 (best) BASIC12.56□□□□□ -0.4
Hist1h1dP43277 Moxd1-201ENSMUST00000095784 3090 ntAPPRIS P1 TSL 1 (best) BASIC12.56□□□□□ -0.4
Hist1h1dP43277 Wbp2-201ENSMUST00000074628 1826 ntAPPRIS P1 TSL 1 (best) BASIC12.55□□□□□ -0.4
Hist1h1dP43277 Cdk6-201ENSMUST00000042410 2470 ntAPPRIS P1 TSL 1 (best) BASIC12.55□□□□□ -0.4
Hist1h1dP43277 Rxrb-202ENSMUST00000116612 2283 ntAPPRIS ALT2 TSL 1 (best) BASIC12.55□□□□□ -0.4
Hist1h1dP43277 Fhdc1-205ENSMUST00000194027 1648 ntTSL 5 BASIC12.55□□□□□ -0.4
Hist1h1dP43277 Lin54-201ENSMUST00000046154 4451 ntAPPRIS P1 TSL 1 (best) BASIC12.55□□□□□ -0.4
Hist1h1dP43277 Gnpat-201ENSMUST00000034466 2984 ntAPPRIS P1 TSL 1 (best) BASIC12.55□□□□□ -0.4
Hist1h1dP43277 Ano7-201ENSMUST00000058682 2963 ntAPPRIS ALT2 TSL 1 (best) BASIC12.55□□□□□ -0.4
Hist1h1dP43277 Dlx4os-201ENSMUST00000156477 1664 ntTSL 1 (best) BASIC12.55□□□□□ -0.4
Hist1h1dP43277 Slc2a6-201ENSMUST00000045702 2138 ntAPPRIS P1 TSL 1 (best) BASIC12.55□□□□□ -0.4
Hist1h1dP43277 Gm38575-203ENSMUST00000215824 1490 ntTSL 1 (best) BASIC12.55□□□□□ -0.4
Hist1h1dP43277 Npcd-202ENSMUST00000089299 1453 ntAPPRIS P4 TSL 1 (best) BASIC12.55□□□□□ -0.4
Hist1h1dP43277 Kirrel-202ENSMUST00000107618 7278 ntAPPRIS P2 TSL 5 BASIC12.55□□□□□ -0.4
Hist1h1dP43277 4930401G09Rik-201ENSMUST00000139500 637 ntTSL 1 (best) BASIC12.55□□□□□ -0.4
Hist1h1dP43277 Gm18489-201ENSMUST00000172565 551 ntBASIC12.55□□□□□ -0.4
Hist1h1dP43277 Gm37584-201ENSMUST00000193595 1290 ntBASIC12.55□□□□□ -0.4
Hist1h1dP43277 D530014G21Rik-201ENSMUST00000208416 587 ntTSL 1 (best) BASIC12.55□□□□□ -0.4
Hist1h1dP43277 Gm4316-202ENSMUST00000212490 1115 ntTSL 1 (best) BASIC12.55□□□□□ -0.4
Hist1h1dP43277 Pym1-201ENSMUST00000065210 1156 ntAPPRIS ALT2 TSL 1 (best) BASIC12.55□□□□□ -0.4
Hist1h1dP43277 Npw-201ENSMUST00000095544 638 ntAPPRIS ALT2 TSL 1 (best) BASIC12.55□□□□□ -0.4
Hist1h1dP43277 Acp6-201ENSMUST00000090759 1754 ntAPPRIS P1 TSL 1 (best) BASIC12.55□□□□□ -0.4
Hist1h1dP43277 Fam163b-201ENSMUST00000151224 2959 ntAPPRIS P1 TSL 1 (best) BASIC12.55□□□□□ -0.4
Hist1h1dP43277 Camsap2-202ENSMUST00000192001 6329 ntAPPRIS ALT2 TSL 1 (best) BASIC12.55□□□□□ -0.4
Hist1h1dP43277 Lcat-201ENSMUST00000038896 1342 ntAPPRIS P1 TSL 1 (best) BASIC12.55□□□□□ -0.4
Hist1h1dP43277 Derl3-201ENSMUST00000009236 1321 ntAPPRIS P2 TSL 1 (best) BASIC12.55□□□□□ -0.4
Hist1h1dP43277 Tmem88-201ENSMUST00000050140 1582 ntAPPRIS P1 TSL 1 (best) BASIC12.55□□□□□ -0.4
Hist1h1dP43277 Mon1a-202ENSMUST00000191906 2821 ntTSL 2 BASIC12.55□□□□□ -0.4
Hist1h1dP43277 Ush1g-201ENSMUST00000103037 3306 ntAPPRIS P1 TSL 1 (best) BASIC12.55□□□□□ -0.4
Hist1h1dP43277 Arid4b-203ENSMUST00000110534 5864 ntAPPRIS P1 TSL 1 (best) BASIC12.55□□□□□ -0.4
Hist1h1dP43277 Hipk3-202ENSMUST00000111124 4125 ntAPPRIS P1 TSL 5 BASIC12.55□□□□□ -0.4
Hist1h1dP43277 Gm6297-201ENSMUST00000181475 2146 ntTSL 1 (best) BASIC12.55□□□□□ -0.4
Hist1h1dP43277 Fam161a-205ENSMUST00000172602 1935 ntAPPRIS P1 TSL 2 BASIC12.54□□□□□ -0.4
Hist1h1dP43277 Rassf10-201ENSMUST00000182858 3496 ntAPPRIS P1 BASIC12.54□□□□□ -0.4
Hist1h1dP43277 Dstyk-204ENSMUST00000188389 3232 ntTSL 5 BASIC12.54□□□□□ -0.4
Hist1h1dP43277 Trmt10c-201ENSMUST00000059052 3002 ntAPPRIS P1 TSL 1 (best) BASIC12.54□□□□□ -0.4
Hist1h1dP43277 Fam208b-201ENSMUST00000096069 8338 ntAPPRIS P1 TSL 1 (best) BASIC12.54□□□□□ -0.4
Hist1h1dP43277 Pdia2-201ENSMUST00000039113 1721 ntAPPRIS P2 TSL 1 (best) BASIC12.54□□□□□ -0.4
Hist1h1dP43277 Ahcy-201ENSMUST00000054607 2543 ntAPPRIS P1 TSL 1 (best) BASIC12.54□□□□□ -0.4
Hist1h1dP43277 Fkbp10-202ENSMUST00000107400 1467 ntTSL 5 BASIC12.54□□□□□ -0.4
Hist1h1dP43277 Cdk5r1-201ENSMUST00000053413 4162 ntAPPRIS P1 BASIC12.54□□□□□ -0.4
Hist1h1dP43277 Zufsp-205ENSMUST00000218880 2005 ntTSL 5 BASIC12.54□□□□□ -0.4
Hist1h1dP43277 Zfp668-204ENSMUST00000106263 3132 ntAPPRIS P1 TSL 1 (best) BASIC12.54□□□□□ -0.4
Hist1h1dP43277 Kcnf1-201ENSMUST00000170580 4789 ntAPPRIS P1 BASIC12.54□□□□□ -0.4
Hist1h1dP43277 Etv3-202ENSMUST00000119109 5309 ntAPPRIS P2 TSL 1 (best) BASIC12.54□□□□□ -0.4
Hist1h1dP43277 Acot3-201ENSMUST00000021653 3431 ntAPPRIS P3 TSL 1 (best) BASIC12.54□□□□□ -0.4
Hist1h1dP43277 Selenon-201ENSMUST00000060435 3445 ntAPPRIS P1 TSL 5 BASIC12.54□□□□□ -0.4
Hist1h1dP43277 Pou2f2-209ENSMUST00000175774 7047 ntAPPRIS ALT2 TSL 1 (best) BASIC12.54□□□□□ -0.4
Hist1h1dP43277 Fbxl19-203ENSMUST00000186207 3178 ntAPPRIS P2 TSL 1 (best) BASIC12.54□□□□□ -0.4
Hist1h1dP43277 Sgce-202ENSMUST00000090686 1547 ntTSL 5 BASIC12.54□□□□□ -0.4
Hist1h1dP43277 Ramp2-204ENSMUST00000129680 1178 ntAPPRIS P2 TSL 1 (best) BASIC12.54□□□□□ -0.4
Hist1h1dP43277 Gm12963-201ENSMUST00000131846 783 ntTSL 5 BASIC12.54□□□□□ -0.4
Hist1h1dP43277 Gm5577-203ENSMUST00000153372 815 ntTSL 1 (best) BASIC12.54□□□□□ -0.4
Hist1h1dP43277 Gm28051-201ENSMUST00000179306 445 ntAPPRIS P1 TSL 2 BASIC12.54□□□□□ -0.4
Hist1h1dP43277 4921514A10Rik-201ENSMUST00000181450 2114 ntTSL 5 BASIC12.54□□□□□ -0.4
Hist1h1dP43277 5033426O07Rik-202ENSMUST00000212635 2110 ntTSL 5 BASIC12.54□□□□□ -0.4
Hist1h1dP43277 AC151836.1-202ENSMUST00000226259 753 ntBASIC12.54□□□□□ -0.4
Hist1h1dP43277 Rfc4-201ENSMUST00000023598 1228 ntAPPRIS P1 TSL 1 (best) BASIC12.54□□□□□ -0.4
Hist1h1dP43277 Gpr146-201ENSMUST00000051293 4157 ntAPPRIS P1 TSL 1 (best) BASIC12.54□□□□□ -0.4
Retrieved 100 of 76,532 protein–RNA pairs in 41.6 ms