Protein–RNA interactions for Protein: P43275

Hist1h1a, Histone H1.1, mousemouse

Predictions only

Length 213 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Hist1h1aP43275 Cd302-202ENSMUST00000074606 1354 ntAPPRIS ALT2 TSL 1 (best) BASIC12.27□□□□□ -0.45
Hist1h1aP43275 Mrps35-201ENSMUST00000036111 4162 ntAPPRIS P1 TSL 1 (best) BASIC12.27□□□□□ -0.45
Hist1h1aP43275 A230060F14Rik-202ENSMUST00000190739 1889 ntBASIC12.27□□□□□ -0.45
Hist1h1aP43275 Pex12-202ENSMUST00000108146 2389 ntAPPRIS P1 TSL 1 (best) BASIC12.27□□□□□ -0.45
Hist1h1aP43275 Ebag9-202ENSMUST00000226165 1931 ntAPPRIS P1 BASIC12.27□□□□□ -0.45
Hist1h1aP43275 Pcdha12-201ENSMUST00000047614 5335 ntAPPRIS P1 TSL 1 (best) BASIC12.27□□□□□ -0.45
Hist1h1aP43275 Prkcb-202ENSMUST00000064989 2911 ntAPPRIS P3 TSL 1 (best) BASIC12.27□□□□□ -0.45
Hist1h1aP43275 Myo1d-201ENSMUST00000041065 5354 ntAPPRIS P1 TSL 5 BASIC12.27□□□□□ -0.45
Hist1h1aP43275 Ino80-202ENSMUST00000110808 3928 ntTSL 1 (best) BASIC12.27□□□□□ -0.45
Hist1h1aP43275 Nupl1-207ENSMUST00000225311 2475 ntBASIC12.27□□□□□ -0.45
Hist1h1aP43275 Fndc7-201ENSMUST00000053065 3009 ntAPPRIS ALT2 TSL 1 (best) BASIC12.27□□□□□ -0.45
Hist1h1aP43275 Slc30a2-201ENSMUST00000081094 2023 ntAPPRIS ALT2 TSL 1 (best) BASIC12.27□□□□□ -0.45
Hist1h1aP43275 Ptk2-202ENSMUST00000170939 3598 ntTSL 2 BASIC12.27□□□□□ -0.45
Hist1h1aP43275 Rnf123-214ENSMUST00000162355 4727 ntAPPRIS ALT2 TSL 1 (best) BASIC12.26□□□□□ -0.45
Hist1h1aP43275 Strap-201ENSMUST00000064910 2650 ntAPPRIS P1 TSL 1 (best) BASIC12.26□□□□□ -0.45
Hist1h1aP43275 0610009E02Rik-201ENSMUST00000133463 1609 ntTSL 1 (best) BASIC12.26□□□□□ -0.45
Hist1h1aP43275 Tmem82-201ENSMUST00000053263 1671 ntAPPRIS P1 TSL 1 (best) BASIC12.26□□□□□ -0.45
Hist1h1aP43275 Acly-202ENSMUST00000107385 1741 ntTSL 1 (best) BASIC12.26□□□□□ -0.45
Hist1h1aP43275 Stx5a-201ENSMUST00000010254 1780 ntAPPRIS ALT2 TSL 5 BASIC12.26□□□□□ -0.45
Hist1h1aP43275 Large2-214ENSMUST00000176774 2377 ntAPPRIS ALT2 TSL 5 BASIC12.26□□□□□ -0.45
Hist1h1aP43275 Hsph1-205ENSMUST00000201452 3140 ntAPPRIS P1 TSL 1 (best) BASIC12.26□□□□□ -0.45
Hist1h1aP43275 Mir142hg-201ENSMUST00000123700 269 ntTSL 1 (best) BASIC12.26□□□□□ -0.45
Hist1h1aP43275 Gm27357-201ENSMUST00000183754 135 ntBASIC12.26□□□□□ -0.45
Hist1h1aP43275 Gm43661-201ENSMUST00000199099 687 ntTSL 3 BASIC12.26□□□□□ -0.45
Hist1h1aP43275 Acyp2-201ENSMUST00000074613 863 ntAPPRIS P1 TSL 1 (best) BASIC12.26□□□□□ -0.45
Hist1h1aP43275 Cldn19-201ENSMUST00000084309 924 ntAPPRIS P4 TSL 1 (best) BASIC12.26□□□□□ -0.45
Hist1h1aP43275 Jakmip1-212ENSMUST00000174629 1941 ntTSL 5 BASIC12.26□□□□□ -0.45
Hist1h1aP43275 Sumo3-201ENSMUST00000020501 2630 ntAPPRIS P3 TSL 1 (best) BASIC12.26□□□□□ -0.45
Hist1h1aP43275 Gpsm3-201ENSMUST00000038244 1343 ntAPPRIS P1 TSL 1 (best) BASIC12.26□□□□□ -0.45
Hist1h1aP43275 Twsg1-201ENSMUST00000024906 4046 ntAPPRIS P1 TSL 1 (best) BASIC12.26□□□□□ -0.45
Hist1h1aP43275 Gm14780-201ENSMUST00000118387 2737 ntBASIC12.26□□□□□ -0.45
Hist1h1aP43275 Hipk3-202ENSMUST00000111124 4125 ntAPPRIS P1 TSL 5 BASIC12.26□□□□□ -0.45
Hist1h1aP43275 Gm21451-201ENSMUST00000111062 2775 ntBASIC12.26□□□□□ -0.45
Hist1h1aP43275 B3gnt4-201ENSMUST00000031384 1423 ntAPPRIS P1 BASIC12.26□□□□□ -0.45
Hist1h1aP43275 Eef2kmt-201ENSMUST00000064635 2170 ntAPPRIS P1 TSL 1 (best) BASIC12.26□□□□□ -0.45
Hist1h1aP43275 Raet1e-204ENSMUST00000181645 1579 ntAPPRIS P1 TSL 1 (best) BASIC12.26□□□□□ -0.45
Hist1h1aP43275 Rara-203ENSMUST00000107474 2380 ntAPPRIS P1 TSL 5 BASIC12.26□□□□□ -0.45
Hist1h1aP43275 Ror2-201ENSMUST00000021918 3985 ntAPPRIS P2 TSL 1 (best) BASIC12.26□□□□□ -0.45
Hist1h1aP43275 Rab9b-201ENSMUST00000058814 3980 ntAPPRIS P1 TSL 1 (best) BASIC12.26□□□□□ -0.45
Hist1h1aP43275 Sh2b3-202ENSMUST00000086310 4195 ntAPPRIS P3 TSL 1 (best) BASIC12.26□□□□□ -0.45
Hist1h1aP43275 Ndufv1-201ENSMUST00000042497 1661 ntAPPRIS P2 TSL 1 (best) BASIC12.26□□□□□ -0.45
Hist1h1aP43275 2610206C17Rik-201ENSMUST00000129059 1717 ntTSL 2 BASIC12.25□□□□□ -0.45
Hist1h1aP43275 Ksr1-207ENSMUST00000226282 5260 ntBASIC12.25□□□□□ -0.45
Hist1h1aP43275 Pcnx3-201ENSMUST00000068169 5276 ntTSL 1 (best) BASIC12.25□□□□□ -0.45
Hist1h1aP43275 Galnt17-201ENSMUST00000086023 8040 ntAPPRIS P1 TSL 1 (best) BASIC12.25□□□□□ -0.45
Hist1h1aP43275 Ulk1-211ENSMUST00000200299 3581 ntAPPRIS ALT2 TSL 1 (best) BASIC12.25□□□□□ -0.45
Hist1h1aP43275 4930459C07Rik-202ENSMUST00000219638 1805 ntTSL 5 BASIC12.25□□□□□ -0.45
Hist1h1aP43275 Kmt2e-202ENSMUST00000115128 7317 ntAPPRIS P1 TSL 5 BASIC12.25□□□□□ -0.45
Hist1h1aP43275 8030474K03Rik-202ENSMUST00000151231 1940 ntAPPRIS P1 TSL 5 BASIC12.25□□□□□ -0.45
Hist1h1aP43275 Dnajb1-201ENSMUST00000005620 2996 ntAPPRIS P1 TSL 1 (best) BASIC12.25□□□□□ -0.45
Hist1h1aP43275 Trmt10c-201ENSMUST00000059052 3002 ntAPPRIS P1 TSL 1 (best) BASIC12.25□□□□□ -0.45
Hist1h1aP43275 Zc3h13-201ENSMUST00000022577 6151 ntAPPRIS P2 TSL 5 BASIC12.25□□□□□ -0.45
Hist1h1aP43275 Mfsd6l-201ENSMUST00000053211 2060 ntAPPRIS P1 BASIC12.25□□□□□ -0.45
Hist1h1aP43275 Fbrs-202ENSMUST00000205432 4166 ntAPPRIS ALT2 TSL 5 BASIC12.25□□□□□ -0.45
Hist1h1aP43275 Zfp358-203ENSMUST00000208423 2200 ntAPPRIS P1 BASIC12.25□□□□□ -0.45
Hist1h1aP43275 Plch2-201ENSMUST00000105631 5053 ntAPPRIS ALT2 TSL 5 BASIC12.25□□□□□ -0.45
Hist1h1aP43275 Rhoc-202ENSMUST00000106787 959 ntAPPRIS P1 TSL 2 BASIC12.25□□□□□ -0.45
Hist1h1aP43275 Gm8097-201ENSMUST00000117903 829 ntBASIC12.25□□□□□ -0.45
Hist1h1aP43275 D3Ertd751e-205ENSMUST00000120167 773 ntAPPRIS ALT2 TSL 5 BASIC12.25□□□□□ -0.45
Hist1h1aP43275 Smim22-208ENSMUST00000185147 399 ntAPPRIS ALT2 TSL 2 BASIC12.25□□□□□ -0.45
Hist1h1aP43275 Gm29501-201ENSMUST00000186133 530 ntTSL 5 BASIC12.25□□□□□ -0.45
Hist1h1aP43275 Gm28793-201ENSMUST00000190845 413 ntTSL 5 BASIC12.25□□□□□ -0.45
Hist1h1aP43275 Gm42456-201ENSMUST00000196840 387 ntTSL 3 BASIC12.25□□□□□ -0.45
Hist1h1aP43275 Qdpr-208ENSMUST00000197946 1206 ntTSL 5 BASIC12.25□□□□□ -0.45
Hist1h1aP43275 D530033B14Rik-201ENSMUST00000205412 546 ntTSL 5 BASIC12.25□□□□□ -0.45
Hist1h1aP43275 Hs3st2-202ENSMUST00000206880 1149 ntTSL 1 (best) BASIC12.25□□□□□ -0.45
Hist1h1aP43275 Krt10-202ENSMUST00000211768 557 ntTSL 3 BASIC12.25□□□□□ -0.45
Hist1h1aP43275 AC093926.2-201ENSMUST00000214468 1228 ntBASIC12.25□□□□□ -0.45
Hist1h1aP43275 Eif3h-201ENSMUST00000022925 1295 ntAPPRIS P1 TSL 1 (best) BASIC12.25□□□□□ -0.45
Hist1h1aP43275 Etfb-201ENSMUST00000004729 893 ntAPPRIS P1 TSL 1 (best) BASIC12.25□□□□□ -0.45
Hist1h1aP43275 Selenov-201ENSMUST00000056589 1267 ntAPPRIS P1 TSL 1 (best) BASIC12.25□□□□□ -0.45
Hist1h1aP43275 Rhog-201ENSMUST00000098230 1269 ntAPPRIS P1 TSL 1 (best) BASIC12.25□□□□□ -0.45
Hist1h1aP43275 Apaf1-201ENSMUST00000020157 6577 ntAPPRIS P3 TSL 1 (best) BASIC12.25□□□□□ -0.45
Hist1h1aP43275 Rbm3-206ENSMUST00000115621 1338 ntAPPRIS ALT1 TSL 1 (best) BASIC12.25□□□□□ -0.45
Hist1h1aP43275 Gm45779-201ENSMUST00000212189 4064 ntBASIC12.25□□□□□ -0.45
Hist1h1aP43275 Rgs3-204ENSMUST00000107420 2752 ntTSL 1 (best) BASIC12.25□□□□□ -0.45
Hist1h1aP43275 Egr1-201ENSMUST00000064795 4484 ntAPPRIS P1 TSL 1 (best) BASIC12.25□□□□□ -0.45
Hist1h1aP43275 Kbtbd7-201ENSMUST00000061222 4526 ntAPPRIS P1 BASIC12.25□□□□□ -0.45
Hist1h1aP43275 Zdhhc7-201ENSMUST00000034280 3069 ntAPPRIS P1 TSL 1 (best) BASIC12.25□□□□□ -0.45
Hist1h1aP43275 Gal3st1-203ENSMUST00000109981 1600 ntAPPRIS P1 TSL 1 (best) BASIC12.25□□□□□ -0.45
Hist1h1aP43275 Olfr683-202ENSMUST00000209879 3841 ntAPPRIS P1 TSL 5 BASIC12.25□□□□□ -0.45
Hist1h1aP43275 Cmtm1-202ENSMUST00000160596 1900 ntAPPRIS ALT2 TSL 5 BASIC12.25□□□□□ -0.45
Hist1h1aP43275 Cuedc2-202ENSMUST00000167861 1941 ntAPPRIS P1 TSL 5 BASIC12.25□□□□□ -0.45
Hist1h1aP43275 Dtx3-201ENSMUST00000038217 1944 ntAPPRIS P2 TSL 1 (best) BASIC12.25□□□□□ -0.45
Hist1h1aP43275 Lmna-203ENSMUST00000120377 2021 ntAPPRIS ALT2 TSL 1 (best) BASIC12.25□□□□□ -0.45
Hist1h1aP43275 Siglecf-201ENSMUST00000012798 2510 ntAPPRIS P3 TSL 1 (best) BASIC12.25□□□□□ -0.45
Hist1h1aP43275 Ccp110-202ENSMUST00000106557 5073 ntAPPRIS P1 TSL 1 (best) BASIC12.25□□□□□ -0.45
Hist1h1aP43275 Fxyd3-205ENSMUST00000167369 2894 ntAPPRIS P1 TSL 1 (best) BASIC12.24□□□□□ -0.45
Hist1h1aP43275 Tbk1-201ENSMUST00000020316 3024 ntAPPRIS P1 TSL 1 (best) BASIC12.24□□□□□ -0.45
Hist1h1aP43275 Dnajb2-210ENSMUST00000188931 3066 ntTSL 1 (best) BASIC12.24□□□□□ -0.45
Hist1h1aP43275 Tcf12-202ENSMUST00000183404 6299 ntAPPRIS P3 TSL 1 (best) BASIC12.24□□□□□ -0.45
Hist1h1aP43275 Lrp10-201ENSMUST00000022782 4228 ntAPPRIS P1 TSL 1 (best) BASIC12.24□□□□□ -0.45
Hist1h1aP43275 Adgrb2-206ENSMUST00000106018 4470 ntAPPRIS ALT2 TSL 5 BASIC12.24□□□□□ -0.45
Hist1h1aP43275 Dnajb5-204ENSMUST00000107973 2300 ntAPPRIS P2 TSL 1 (best) BASIC12.24□□□□□ -0.45
Hist1h1aP43275 Tomm34-202ENSMUST00000109384 1923 ntAPPRIS ALT1 TSL 1 (best) BASIC12.24□□□□□ -0.45
Hist1h1aP43275 Olfr55-201ENSMUST00000112168 948 ntAPPRIS P1 BASIC12.24□□□□□ -0.45
Hist1h1aP43275 Ramp2-202ENSMUST00000122006 899 ntTSL 2 BASIC12.24□□□□□ -0.45
Hist1h1aP43275 Gm12895-201ENSMUST00000122214 226 ntBASIC12.24□□□□□ -0.45
Hist1h1aP43275 Gm13962-201ENSMUST00000131512 611 ntTSL 5 BASIC12.24□□□□□ -0.45
Hist1h1aP43275 Snx14-204ENSMUST00000165315 3109 ntAPPRIS P2 TSL 1 (best) BASIC12.24□□□□□ -0.45
Retrieved 100 of 76,532 protein–RNA pairs in 32.8 ms