Protein–RNA interactions for Protein: P41245

Mmp9, Matrix metalloproteinase-9, mousemouse

Predictions only

Length 730 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Mmp9P41245 Synrg-207ENSMUST00000183456 3990 ntAPPRIS ALT2 TSL 5 BASIC12.46□□□□□ -0.41
Mmp9P41245 Klhl21-201ENSMUST00000097773 3986 ntAPPRIS P1 TSL 1 (best) BASIC12.46□□□□□ -0.41
Mmp9P41245 Lipe-202ENSMUST00000054301 2661 ntAPPRIS ALT2 TSL 1 (best) BASIC12.46□□□□□ -0.41
Mmp9P41245 Fbxo3-201ENSMUST00000028603 4740 ntAPPRIS P4 TSL 1 (best) BASIC12.46□□□□□ -0.41
Mmp9P41245 Cul7-201ENSMUST00000043464 5530 ntAPPRIS P1 TSL 1 (best) BASIC12.46□□□□□ -0.41
Mmp9P41245 Camsap2-202ENSMUST00000192001 6329 ntAPPRIS ALT2 TSL 1 (best) BASIC12.46□□□□□ -0.41
Mmp9P41245 Tcf25-208ENSMUST00000212571 2649 ntAPPRIS ALT2 TSL 1 (best) BASIC12.46□□□□□ -0.41
Mmp9P41245 Kctd20-203ENSMUST00000118762 3839 ntTSL 1 (best) BASIC12.46□□□□□ -0.41
Mmp9P41245 Tle3-201ENSMUST00000034820 4646 ntTSL 1 (best) BASIC12.46□□□□□ -0.41
Mmp9P41245 Pafah1b1-202ENSMUST00000102520 5789 ntAPPRIS P1 TSL 1 (best) BASIC12.46□□□□□ -0.41
Mmp9P41245 Clic6-201ENSMUST00000023670 3758 ntAPPRIS P1 TSL 1 (best) BASIC12.46□□□□□ -0.41
Mmp9P41245 Prpf3-201ENSMUST00000015892 2933 ntAPPRIS P1 TSL 1 (best) BASIC12.46□□□□□ -0.41
Mmp9P41245 Nacad-201ENSMUST00000045713 4892 ntAPPRIS P1 TSL 1 (best) BASIC12.46□□□□□ -0.41
Mmp9P41245 Ror2-201ENSMUST00000021918 3985 ntAPPRIS P2 TSL 1 (best) BASIC12.46□□□□□ -0.41
Mmp9P41245 Pias2-201ENSMUST00000114776 2089 ntAPPRIS ALT2 TSL 1 (best) BASIC12.46□□□□□ -0.41
Mmp9P41245 Ppp1r15a-202ENSMUST00000167273 2809 ntAPPRIS P1 TSL 2 BASIC12.46□□□□□ -0.41
Mmp9P41245 Erg-206ENSMUST00000122199 2007 ntAPPRIS ALT1 TSL 1 (best) BASIC12.46□□□□□ -0.41
Mmp9P41245 Tjp2-201ENSMUST00000099558 4591 ntAPPRIS P1 TSL 1 (best) BASIC12.46□□□□□ -0.41
Mmp9P41245 Rps27a-202ENSMUST00000102845 791 ntAPPRIS P1 TSL 1 (best) BASIC12.46□□□□□ -0.41
Mmp9P41245 Gm11355-201ENSMUST00000121120 306 ntBASIC12.46□□□□□ -0.41
Mmp9P41245 Gm12963-201ENSMUST00000131846 783 ntTSL 5 BASIC12.46□□□□□ -0.41
Mmp9P41245 Tmem178b-203ENSMUST00000180886 712 ntTSL 5 BASIC12.46□□□□□ -0.41
Mmp9P41245 Gm29501-201ENSMUST00000186133 530 ntTSL 5 BASIC12.46□□□□□ -0.41
Mmp9P41245 Idnk-201ENSMUST00000051490 764 ntAPPRIS P1 TSL 1 (best) BASIC12.46□□□□□ -0.41
Mmp9P41245 Taar2-201ENSMUST00000079134 1020 ntAPPRIS P1 TSL 1 (best) BASIC12.46□□□□□ -0.41
Mmp9P41245 Rubcn-201ENSMUST00000040986 5257 ntAPPRIS P3 TSL 1 (best) BASIC12.46□□□□□ -0.41
Mmp9P41245 Igsf21-201ENSMUST00000039331 1979 ntAPPRIS P1 TSL 1 (best) BASIC12.46□□□□□ -0.41
Mmp9P41245 Fbxo41-201ENSMUST00000159062 6505 ntAPPRIS P1 TSL 1 (best) BASIC12.46□□□□□ -0.41
Mmp9P41245 Myo1c-204ENSMUST00000108431 4718 ntAPPRIS P2 TSL 1 (best) BASIC12.46□□□□□ -0.42
Mmp9P41245 Spns1-201ENSMUST00000032994 2219 ntAPPRIS P1 TSL 1 (best) BASIC12.46□□□□□ -0.42
Mmp9P41245 Mfsd3-201ENSMUST00000019224 2169 ntAPPRIS P1 TSL 1 (best) BASIC12.46□□□□□ -0.42
Mmp9P41245 Gm45003-201ENSMUST00000205875 2158 ntBASIC12.46□□□□□ -0.42
Mmp9P41245 Adal-205ENSMUST00000119031 2477 ntAPPRIS P1 TSL 5 BASIC12.46□□□□□ -0.42
Mmp9P41245 Shroom3-202ENSMUST00000113054 6401 ntTSL 1 (best) BASIC12.46□□□□□ -0.42
Mmp9P41245 Cnih4-203ENSMUST00000111059 3127 ntTSL 1 (best) BASIC12.46□□□□□ -0.42
Mmp9P41245 Zfp467-203ENSMUST00000114558 3115 ntTSL 1 (best) BASIC12.46□□□□□ -0.42
Mmp9P41245 S100pbp-204ENSMUST00000106061 4426 ntAPPRIS P1 TSL 1 (best) BASIC12.46□□□□□ -0.42
Mmp9P41245 Sec24a-202ENSMUST00000064297 2104 ntTSL 1 (best) BASIC12.46□□□□□ -0.42
Mmp9P41245 Ddx49-201ENSMUST00000008004 2137 ntAPPRIS P1 TSL 1 (best) BASIC12.46□□□□□ -0.42
Mmp9P41245 Sp2-203ENSMUST00000107624 3055 ntAPPRIS P2 TSL 1 (best) BASIC12.46□□□□□ -0.42
Mmp9P41245 Ppp2r5b-201ENSMUST00000025695 2742 ntAPPRIS P1 TSL 1 (best) BASIC12.46□□□□□ -0.42
Mmp9P41245 Olfr1156-203ENSMUST00000216726 3271 ntAPPRIS P1 TSL 5 BASIC12.45□□□□□ -0.42
Mmp9P41245 Col4a1-201ENSMUST00000033898 6615 ntAPPRIS P1 TSL 1 (best) BASIC12.45□□□□□ -0.42
Mmp9P41245 Ubl7-201ENSMUST00000163329 1364 ntAPPRIS P1 TSL 5 BASIC12.45□□□□□ -0.42
Mmp9P41245 Mob3c-201ENSMUST00000030477 2884 ntAPPRIS P1 TSL 1 (best) BASIC12.45□□□□□ -0.42
Mmp9P41245 Ptger1-201ENSMUST00000019608 4694 ntAPPRIS P1 TSL 1 (best) BASIC12.45□□□□□ -0.42
Mmp9P41245 Fgf13-203ENSMUST00000119833 2237 ntTSL 5 BASIC12.45□□□□□ -0.42
Mmp9P41245 8030474K03Rik-202ENSMUST00000151231 1940 ntAPPRIS P1 TSL 5 BASIC12.45□□□□□ -0.42
Mmp9P41245 Amhr2-201ENSMUST00000023809 1938 ntAPPRIS P1 TSL 1 (best) BASIC12.45□□□□□ -0.42
Mmp9P41245 Ccdc68-201ENSMUST00000043929 1618 ntAPPRIS P2 TSL 1 (best) BASIC12.45□□□□□ -0.42
Mmp9P41245 Sept8-202ENSMUST00000117061 4563 ntAPPRIS P3 TSL 1 (best) BASIC12.45□□□□□ -0.42
Mmp9P41245 Slit1-202ENSMUST00000166496 4556 ntTSL 5 BASIC12.45□□□□□ -0.42
Mmp9P41245 Slc39a3-201ENSMUST00000059551 3680 ntAPPRIS P1 TSL 1 (best) BASIC12.45□□□□□ -0.42
Mmp9P41245 Gm26513-201ENSMUST00000181802 2489 ntBASIC12.45□□□□□ -0.42
Mmp9P41245 Armc9-205ENSMUST00000131412 2160 ntAPPRIS P1 TSL 1 (best) BASIC12.45□□□□□ -0.42
Mmp9P41245 Slc2a6-202ENSMUST00000102890 1887 ntTSL 1 (best) BASIC12.45□□□□□ -0.42
Mmp9P41245 Il2rb-202ENSMUST00000163494 1894 ntAPPRIS P1 TSL 1 (best) BASIC12.45□□□□□ -0.42
Mmp9P41245 Dlgap3-201ENSMUST00000046659 3884 ntAPPRIS P1 TSL 1 (best) BASIC12.45□□□□□ -0.42
Mmp9P41245 Gm4353-201ENSMUST00000111755 1559 ntAPPRIS P1 TSL 1 (best) BASIC12.45□□□□□ -0.42
Mmp9P41245 Nup35-201ENSMUST00000028382 1559 ntAPPRIS P1 TSL 1 (best) BASIC12.45□□□□□ -0.42
Mmp9P41245 Npb-202ENSMUST00000106194 530 ntAPPRIS ALT2 TSL 2 BASIC12.45□□□□□ -0.42
Mmp9P41245 Npb-203ENSMUST00000106195 542 ntAPPRIS P3 TSL 1 (best) BASIC12.45□□□□□ -0.42
Mmp9P41245 0610025J13Rik-203ENSMUST00000180374 713 ntTSL 5 BASIC12.45□□□□□ -0.42
Mmp9P41245 Gm37722-201ENSMUST00000193757 208 ntBASIC12.45□□□□□ -0.42
Mmp9P41245 Gm32031-203ENSMUST00000208993 649 ntTSL 2 BASIC12.45□□□□□ -0.42
Mmp9P41245 Snhg10-202ENSMUST00000222812 527 ntTSL 1 (best) BASIC12.45□□□□□ -0.42
Mmp9P41245 3830406C13Rik-207ENSMUST00000223927 1010 ntBASIC12.45□□□□□ -0.42
Mmp9P41245 Il3ra-205ENSMUST00000224877 1128 ntAPPRIS ALT2 BASIC12.45□□□□□ -0.42
Mmp9P41245 Slc2a6-201ENSMUST00000045702 2138 ntAPPRIS P1 TSL 1 (best) BASIC12.45□□□□□ -0.42
Mmp9P41245 Slco3a1-203ENSMUST00000107453 3793 ntTSL 1 (best) BASIC12.45□□□□□ -0.42
Mmp9P41245 Cadps2-213ENSMUST00000166458 4598 ntAPPRIS ALT2 TSL 5 BASIC12.45□□□□□ -0.42
Mmp9P41245 Asprv1-201ENSMUST00000043400 1547 ntAPPRIS P1 BASIC12.45□□□□□ -0.42
Mmp9P41245 4930438A08Rik-201ENSMUST00000108834 2093 ntAPPRIS P1 TSL 5 BASIC12.45□□□□□ -0.42
Mmp9P41245 Gata2-202ENSMUST00000170089 3135 ntAPPRIS P1 TSL 1 (best) BASIC12.45□□□□□ -0.42
Mmp9P41245 Gabra4-201ENSMUST00000031121 4108 ntAPPRIS P2 TSL 1 (best) BASIC12.45□□□□□ -0.42
Mmp9P41245 Cnnm2-202ENSMUST00000099373 3558 ntAPPRIS P4 TSL 1 (best) BASIC12.45□□□□□ -0.42
Mmp9P41245 Atp2a3-207ENSMUST00000163326 4606 ntAPPRIS ALT2 TSL 5 BASIC12.45□□□□□ -0.42
Mmp9P41245 Pdk2-201ENSMUST00000038431 2246 ntAPPRIS P1 TSL 1 (best) BASIC12.45□□□□□ -0.42
Mmp9P41245 Ahdc1-202ENSMUST00000105914 5898 ntAPPRIS P1 TSL 5 BASIC12.45□□□□□ -0.42
Mmp9P41245 Zbtb17-201ENSMUST00000006377 2722 ntAPPRIS P1 TSL 1 (best) BASIC12.45□□□□□ -0.42
Mmp9P41245 Dnm1-201ENSMUST00000078352 3246 ntAPPRIS P2 TSL 1 (best) BASIC12.45□□□□□ -0.42
Mmp9P41245 1810008I18Rik-201ENSMUST00000185464 2419 ntBASIC12.45□□□□□ -0.42
Mmp9P41245 Sufu-203ENSMUST00000118440 2663 ntTSL 5 BASIC12.45□□□□□ -0.42
Mmp9P41245 Sema3b-205ENSMUST00000102532 3191 ntAPPRIS P1 TSL 1 (best) BASIC12.44□□□□□ -0.42
Mmp9P41245 Olfr718-ps1-203ENSMUST00000215102 4913 ntAPPRIS P5 TSL 5 BASIC12.44□□□□□ -0.42
Mmp9P41245 Sema6c-203ENSMUST00000107217 3595 ntTSL 1 (best) BASIC12.44□□□□□ -0.42
Mmp9P41245 Dnaaf1-201ENSMUST00000093100 2821 ntAPPRIS P1 TSL 1 (best) BASIC12.44□□□□□ -0.42
Mmp9P41245 Erp29-203ENSMUST00000130451 5204 ntAPPRIS P1 TSL 1 (best) BASIC12.44□□□□□ -0.42
Mmp9P41245 Hes6-201ENSMUST00000086851 1335 ntAPPRIS P1 TSL 1 (best) BASIC12.44□□□□□ -0.42
Mmp9P41245 Gpr146-201ENSMUST00000051293 4157 ntAPPRIS P1 TSL 1 (best) BASIC12.44□□□□□ -0.42
Mmp9P41245 Dis3l-203ENSMUST00000120760 3661 ntTSL 1 (best) BASIC12.44□□□□□ -0.42
Mmp9P41245 Tpr-203ENSMUST00000124973 7430 ntAPPRIS P2 TSL 1 (best) BASIC12.44□□□□□ -0.42
Mmp9P41245 Elfn2-201ENSMUST00000088592 4846 ntAPPRIS P1 TSL 1 (best) BASIC12.44□□□□□ -0.42
Mmp9P41245 Gm11950-201ENSMUST00000121615 838 ntBASIC12.44□□□□□ -0.42
Mmp9P41245 Gm15545-203ENSMUST00000150613 1059 ntTSL 1 (best) BASIC12.44□□□□□ -0.42
Mmp9P41245 Pantr2-201ENSMUST00000180589 463 ntTSL 3 BASIC12.44□□□□□ -0.42
Mmp9P41245 2010010A06Rik-202ENSMUST00000186356 694 ntTSL 1 (best) BASIC12.44□□□□□ -0.42
Mmp9P41245 Ifi27l2b-201ENSMUST00000044687 1093 ntAPPRIS P1 TSL 1 (best) BASIC12.44□□□□□ -0.42
Mmp9P41245 Spem1-201ENSMUST00000045771 1041 ntAPPRIS P1 TSL 1 (best) BASIC12.44□□□□□ -0.42
Mmp9P41245 Spr-ps1-201ENSMUST00000089584 605 ntBASIC12.44□□□□□ -0.42
Retrieved 100 of 76,532 protein–RNA pairs in 27.8 ms