Protein–RNA interactions for Protein: P41233

Abca1, ATP-binding cassette sub-family A member 1, mousemouse

Predictions only

Length 2,261 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Abca1P41233 Hist1h4k-201ENSMUST00000102983 312 ntAPPRIS P1 BASIC12.36□□□□□ -0.43
Abca1P41233 Olfr55-201ENSMUST00000112168 948 ntAPPRIS P1 BASIC12.36□□□□□ -0.43
Abca1P41233 Oaz1-203ENSMUST00000179172 744 ntTSL 5 BASIC12.36□□□□□ -0.43
Abca1P41233 Prss47-201ENSMUST00000182457 828 ntAPPRIS ALT2 TSL 5 BASIC12.36□□□□□ -0.43
Abca1P41233 Slc12a5-208ENSMUST00000202479 1202 ntTSL 5 BASIC12.36□□□□□ -0.43
Abca1P41233 Gm29909-201ENSMUST00000214500 922 ntTSL 5 BASIC12.36□□□□□ -0.43
Abca1P41233 AC131710.1-201ENSMUST00000228336 990 ntBASIC12.36□□□□□ -0.43
Abca1P41233 Oaz1-ps-201ENSMUST00000052440 681 ntBASIC12.36□□□□□ -0.43
Abca1P41233 Med8-202ENSMUST00000073881 1052 ntTSL 1 (best) BASIC12.36□□□□□ -0.43
Abca1P41233 Pard6a-202ENSMUST00000098444 1273 ntTSL 2 BASIC12.36□□□□□ -0.43
Abca1P41233 Iqck-202ENSMUST00000106547 2026 ntAPPRIS P2 TSL 5 BASIC12.36□□□□□ -0.43
Abca1P41233 Slc35a1-201ENSMUST00000029970 2039 ntAPPRIS P1 TSL 1 (best) BASIC12.36□□□□□ -0.43
Abca1P41233 Pla2g16-203ENSMUST00000136756 1901 ntAPPRIS P1 TSL 1 (best) BASIC12.36□□□□□ -0.43
Abca1P41233 Pltp-201ENSMUST00000059954 1809 ntAPPRIS P1 TSL 1 (best) BASIC12.36□□□□□ -0.43
Abca1P41233 Asb18-201ENSMUST00000086882 3862 ntAPPRIS P1 TSL 1 (best) BASIC12.36□□□□□ -0.43
Abca1P41233 Mis12-201ENSMUST00000048807 3003 ntAPPRIS P1 TSL 1 (best) BASIC12.36□□□□□ -0.43
Abca1P41233 Mtmr12-201ENSMUST00000038172 6840 ntAPPRIS P1 TSL 1 (best) BASIC12.36□□□□□ -0.43
Abca1P41233 Susd3-202ENSMUST00000058196 1418 ntAPPRIS P3 TSL 1 (best) BASIC12.36□□□□□ -0.43
Abca1P41233 Rgs9-201ENSMUST00000020920 2434 ntTSL 1 (best) BASIC12.36□□□□□ -0.43
Abca1P41233 Neurod2-201ENSMUST00000041685 3142 ntAPPRIS P1 TSL 1 (best) BASIC12.35□□□□□ -0.43
Abca1P41233 Nhlrc4-201ENSMUST00000085027 2142 ntAPPRIS P1 TSL 1 (best) BASIC12.35□□□□□ -0.43
Abca1P41233 Lrrc56-203ENSMUST00000084446 2390 ntAPPRIS ALT2 TSL 1 (best) BASIC12.35□□□□□ -0.43
Abca1P41233 Foxc2-201ENSMUST00000054691 2725 ntAPPRIS P1 BASIC12.35□□□□□ -0.43
Abca1P41233 Islr2-204ENSMUST00000165276 3989 ntAPPRIS P3 TSL 2 BASIC12.35□□□□□ -0.43
Abca1P41233 Ptprs-211ENSMUST00000223859 5588 ntBASIC12.35□□□□□ -0.43
Abca1P41233 Ccer2-201ENSMUST00000178767 1054 ntAPPRIS P1 TSL 5 BASIC12.35□□□□□ -0.43
Abca1P41233 Gm6566-201ENSMUST00000221468 1171 ntTSL 1 (best) BASIC12.35□□□□□ -0.43
Abca1P41233 4930408O17Rik-202ENSMUST00000222624 1131 ntTSL 5 BASIC12.35□□□□□ -0.43
Abca1P41233 AC151836.1-202ENSMUST00000226259 753 ntBASIC12.35□□□□□ -0.43
Abca1P41233 Apobec2-201ENSMUST00000046549 1218 ntAPPRIS P1 TSL 1 (best) BASIC12.35□□□□□ -0.43
Abca1P41233 Zfp691-201ENSMUST00000052715 2341 ntAPPRIS P1 TSL 1 (best) BASIC12.35□□□□□ -0.43
Abca1P41233 Zfp36l3-201ENSMUST00000071711 2347 ntAPPRIS P1 BASIC12.35□□□□□ -0.43
Abca1P41233 Arf2-202ENSMUST00000063347 2660 ntAPPRIS P1 TSL 1 (best) BASIC12.35□□□□□ -0.43
Abca1P41233 Slc30a10-201ENSMUST00000061093 5836 ntAPPRIS P1 TSL 1 (best) BASIC12.35□□□□□ -0.43
Abca1P41233 4933426K07Rik-201ENSMUST00000143009 1548 ntTSL 1 (best) BASIC12.35□□□□□ -0.43
Abca1P41233 Alx1-204ENSMUST00000217946 1542 ntTSL 5 BASIC12.35□□□□□ -0.43
Abca1P41233 Gm45723-201ENSMUST00000212135 1783 ntTSL 5 BASIC12.35□□□□□ -0.43
Abca1P41233 Hnrnpa1-202ENSMUST00000087351 1759 ntAPPRIS P1 TSL 1 (best) BASIC12.35□□□□□ -0.43
Abca1P41233 Trhde-201ENSMUST00000061632 5714 ntAPPRIS P1 TSL 1 (best) BASIC12.35□□□□□ -0.43
Abca1P41233 Bcan-201ENSMUST00000090971 3141 ntAPPRIS P1 TSL 1 (best) BASIC12.35□□□□□ -0.43
Abca1P41233 Btaf1-201ENSMUST00000099494 7204 ntAPPRIS P1 TSL 1 (best) BASIC12.35□□□□□ -0.43
Abca1P41233 Slc29a4-201ENSMUST00000058418 2789 ntAPPRIS P1 TSL 1 (best) BASIC12.35□□□□□ -0.43
Abca1P41233 Pex11b-207ENSMUST00000165842 1562 ntTSL 2 BASIC12.35□□□□□ -0.43
Abca1P41233 Slc8b1-202ENSMUST00000076051 2661 ntTSL 1 (best) BASIC12.35□□□□□ -0.43
Abca1P41233 Cdk5r1-201ENSMUST00000053413 4162 ntAPPRIS P1 BASIC12.35□□□□□ -0.43
Abca1P41233 Ldoc1-201ENSMUST00000075983 1459 ntAPPRIS P1 BASIC12.35□□□□□ -0.43
Abca1P41233 Celsr1-201ENSMUST00000016172 10879 ntAPPRIS P1 TSL 1 (best) BASIC12.35□□□□□ -0.43
Abca1P41233 Bad-203ENSMUST00000113426 740 ntTSL 5 BASIC12.35□□□□□ -0.43
Abca1P41233 Gm27618-201ENSMUST00000183671 60 ntBASIC12.35□□□□□ -0.43
Abca1P41233 Gm29520-201ENSMUST00000191209 1067 ntTSL 5 BASIC12.35□□□□□ -0.43
Abca1P41233 Gm29541-201ENSMUST00000191351 678 ntBASIC12.35□□□□□ -0.43
Abca1P41233 Irs3-202ENSMUST00000196511 1281 ntAPPRIS ALT2 TSL 1 (best) BASIC12.35□□□□□ -0.43
Abca1P41233 Eef1akmt2-201ENSMUST00000033257 1107 ntAPPRIS P1 TSL 1 (best) BASIC12.35□□□□□ -0.43
Abca1P41233 Gm14634-201ENSMUST00000139163 1662 ntTSL 1 (best) BASIC12.35□□□□□ -0.43
Abca1P41233 Gemin5-202ENSMUST00000102711 4919 ntAPPRIS ALT2 TSL 5 BASIC12.35□□□□□ -0.43
Abca1P41233 Sept6-203ENSMUST00000115239 1845 ntTSL 1 (best) BASIC12.35□□□□□ -0.43
Abca1P41233 Srgn-204ENSMUST00000160987 1727 ntAPPRIS P1 TSL 3 BASIC12.34□□□□□ -0.43
Abca1P41233 Cacna2d2-202ENSMUST00000085092 5183 ntAPPRIS P4 TSL 5 BASIC12.34□□□□□ -0.43
Abca1P41233 Ifngr1-201ENSMUST00000020188 2112 ntAPPRIS P1 TSL 1 (best) BASIC12.34□□□□□ -0.43
Abca1P41233 Sybu-203ENSMUST00000110269 2920 ntAPPRIS ALT2 TSL 1 (best) BASIC12.34□□□□□ -0.43
Abca1P41233 Adam22-207ENSMUST00000115388 9161 ntAPPRIS ALT2 TSL 5 BASIC12.34□□□□□ -0.43
Abca1P41233 Gm10676-201ENSMUST00000098778 3221 ntBASIC12.34□□□□□ -0.43
Abca1P41233 Parg-202ENSMUST00000163350 3374 ntAPPRIS ALT2 TSL 1 (best) BASIC12.34□□□□□ -0.43
Abca1P41233 Papd4-201ENSMUST00000048702 2990 ntAPPRIS P2 TSL 1 (best) BASIC12.34□□□□□ -0.43
Abca1P41233 Rnf168-201ENSMUST00000014218 3932 ntAPPRIS ALT2 TSL 1 (best) BASIC12.34□□□□□ -0.43
Abca1P41233 Grip2-205ENSMUST00000162300 5206 ntAPPRIS P2 TSL 5 BASIC12.34□□□□□ -0.43
Abca1P41233 Yes1-201ENSMUST00000072311 4586 ntAPPRIS P1 TSL 1 (best) BASIC12.34□□□□□ -0.43
Abca1P41233 Lpgat1-201ENSMUST00000110855 7233 ntAPPRIS P1 TSL 1 (best) BASIC12.34□□□□□ -0.43
Abca1P41233 Cd82-202ENSMUST00000099696 1657 ntAPPRIS P1 TSL 1 (best) BASIC12.34□□□□□ -0.43
Abca1P41233 Gm9917-201ENSMUST00000180865 5192 ntTSL 3 BASIC12.34□□□□□ -0.43
Abca1P41233 Slc31a2-203ENSMUST00000107468 743 ntAPPRIS ALT1 TSL 5 BASIC12.34□□□□□ -0.43
Abca1P41233 Lcn6-202ENSMUST00000114197 635 ntTSL 1 (best) BASIC12.34□□□□□ -0.43
Abca1P41233 Igfbp4-204ENSMUST00000140772 742 ntTSL 2 BASIC12.34□□□□□ -0.43
Abca1P41233 1700021F05Rik-202ENSMUST00000147196 860 ntAPPRIS P1 TSL 1 (best) BASIC12.34□□□□□ -0.43
Abca1P41233 Gm20412-201ENSMUST00000173249 633 ntTSL 5 BASIC12.34□□□□□ -0.43
Abca1P41233 Gm42854-201ENSMUST00000201262 722 ntTSL 1 (best) BASIC12.34□□□□□ -0.43
Abca1P41233 Hmga1-201ENSMUST00000114888 1593 ntAPPRIS ALT1 TSL 1 (best) BASIC12.34□□□□□ -0.43
Abca1P41233 Gm13344-201ENSMUST00000137714 1557 ntTSL 1 (best) BASIC12.34□□□□□ -0.43
Abca1P41233 Dnaja1-210ENSMUST00000164233 5622 ntAPPRIS P1 TSL 5 BASIC12.34□□□□□ -0.43
Abca1P41233 Hykk-201ENSMUST00000039742 5110 ntAPPRIS P1 TSL 1 (best) BASIC12.34□□□□□ -0.43
Abca1P41233 Dffb-201ENSMUST00000030893 2093 ntAPPRIS P1 TSL 1 (best) BASIC12.34□□□□□ -0.43
Abca1P41233 AC133083.1-201ENSMUST00000221736 2209 ntBASIC12.34□□□□□ -0.43
Abca1P41233 Lias-202ENSMUST00000122026 1668 ntAPPRIS P1 TSL 1 (best) BASIC12.34□□□□□ -0.43
Abca1P41233 Ints8-203ENSMUST00000108319 3220 ntAPPRIS P1 TSL 1 (best) BASIC12.34□□□□□ -0.43
Abca1P41233 Papd4-205ENSMUST00000225868 3081 ntAPPRIS ALT1 BASIC12.34□□□□□ -0.43
Abca1P41233 Zyx-207ENSMUST00000203652 2605 ntAPPRIS P3 TSL 1 (best) BASIC12.34□□□□□ -0.43
Abca1P41233 Plekha1-203ENSMUST00000120441 3777 ntAPPRIS ALT2 TSL 5 BASIC12.34□□□□□ -0.43
Abca1P41233 1700028E10Rik-205ENSMUST00000202024 924 ntTSL 1 (best) BASIC12.34□□□□□ -0.43
Abca1P41233 Vsig2-204ENSMUST00000215271 891 ntTSL 1 (best) BASIC12.34□□□□□ -0.43
Abca1P41233 Zfyve21-206ENSMUST00000222843 705 ntTSL 3 BASIC12.34□□□□□ -0.43
Abca1P41233 Gm33785-201ENSMUST00000222961 886 ntTSL 5 BASIC12.34□□□□□ -0.43
Abca1P41233 CT025555.1-201ENSMUST00000225901 1217 ntBASIC12.34□□□□□ -0.43
Abca1P41233 Aim2-204ENSMUST00000166137 2079 ntAPPRIS P1 TSL 5 BASIC12.34□□□□□ -0.43
Abca1P41233 Afg3l2-201ENSMUST00000025408 3085 ntAPPRIS P1 TSL 1 (best) BASIC12.33□□□□□ -0.43
Abca1P41233 Bard1-201ENSMUST00000027393 5659 ntAPPRIS P1 TSL 1 (best) BASIC12.33□□□□□ -0.43
Abca1P41233 Evc-201ENSMUST00000031005 4325 ntAPPRIS P2 TSL 1 (best) BASIC12.33□□□□□ -0.44
Abca1P41233 Fosl2-201ENSMUST00000031017 6537 ntAPPRIS P1 TSL 1 (best) BASIC12.33□□□□□ -0.44
Abca1P41233 Fam178b-201ENSMUST00000114981 1659 ntAPPRIS P3 TSL 1 (best) BASIC12.33□□□□□ -0.44
Abca1P41233 Nfkbid-201ENSMUST00000046177 2039 ntAPPRIS P2 TSL 1 (best) BASIC12.33□□□□□ -0.44
Abca1P41233 Sh2d4a-201ENSMUST00000066594 2718 ntAPPRIS P1 TSL 1 (best) BASIC12.33□□□□□ -0.44
Retrieved 100 of 76,532 protein–RNA pairs in 30.7 ms