Protein–RNA interactions for Protein: P39689

Cdkn1a, Cyclin-dependent kinase inhibitor 1, mousemouse

Predictions only

Length 159 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Cdkn1aP39689 Gm23689-201ENSMUST00000180354 110 ntBASIC12.23□□□□□ -0.45
Cdkn1aP39689 Gm27920-201ENSMUST00000183953 96 ntBASIC12.23□□□□□ -0.45
Cdkn1aP39689 Gm27359-201ENSMUST00000184153 110 ntBASIC12.23□□□□□ -0.45
Cdkn1aP39689 Gm27785-201ENSMUST00000184268 110 ntBASIC12.23□□□□□ -0.45
Cdkn1aP39689 Gm27466-201ENSMUST00000184396 110 ntBASIC12.23□□□□□ -0.45
Cdkn1aP39689 Gm27703-201ENSMUST00000184836 110 ntBASIC12.23□□□□□ -0.45
Cdkn1aP39689 Gm38225-201ENSMUST00000194001 393 ntBASIC12.23□□□□□ -0.45
Cdkn1aP39689 Klk2-ps-201ENSMUST00000205342 571 ntBASIC12.23□□□□□ -0.45
Cdkn1aP39689 Plpp4-203ENSMUST00000205896 714 ntTSL 5 BASIC12.23□□□□□ -0.45
Cdkn1aP39689 Gm44872-201ENSMUST00000207864 420 ntBASIC12.23□□□□□ -0.45
Cdkn1aP39689 Ccdc88c-204ENSMUST00000223097 1253 ntTSL 1 (best) BASIC12.23□□□□□ -0.45
Cdkn1aP39689 Vkorc1-201ENSMUST00000033074 748 ntAPPRIS P1 TSL 1 (best) BASIC12.23□□□□□ -0.45
Cdkn1aP39689 Ccdc172-201ENSMUST00000069419 1086 ntAPPRIS P1 TSL 1 (best) BASIC12.23□□□□□ -0.45
Cdkn1aP39689 Klc4-201ENSMUST00000003642 2322 ntAPPRIS P1 TSL 1 (best) BASIC12.23□□□□□ -0.45
Cdkn1aP39689 Dcdc2a-201ENSMUST00000036932 2345 ntAPPRIS ALT2 TSL 1 (best) BASIC12.23□□□□□ -0.45
Cdkn1aP39689 Foxl2-201ENSMUST00000051312 3256 ntAPPRIS P1 BASIC12.23□□□□□ -0.45
Cdkn1aP39689 Esco1-203ENSMUST00000115864 2148 ntAPPRIS ALT2 TSL 1 (best) BASIC12.23□□□□□ -0.45
Cdkn1aP39689 App-202ENSMUST00000226232 3120 ntAPPRIS ALT2 BASIC12.23□□□□□ -0.45
Cdkn1aP39689 Tfap2a-203ENSMUST00000223869 2037 ntBASIC12.23□□□□□ -0.45
Cdkn1aP39689 Id2-202ENSMUST00000221761 1969 ntAPPRIS P1 TSL 5 BASIC12.23□□□□□ -0.45
Cdkn1aP39689 Chtf8-202ENSMUST00000175940 2890 ntAPPRIS P1 TSL 1 (best) BASIC12.23□□□□□ -0.45
Cdkn1aP39689 Hsd3b7-202ENSMUST00000106271 1713 ntTSL 5 BASIC12.23□□□□□ -0.45
Cdkn1aP39689 Rhot1-203ENSMUST00000077451 3297 ntAPPRIS ALT2 TSL 5 BASIC12.22□□□□□ -0.45
Cdkn1aP39689 BC026585-201ENSMUST00000046743 1618 ntAPPRIS P1 TSL 1 (best) BASIC12.22□□□□□ -0.45
Cdkn1aP39689 Aph1a-202ENSMUST00000056710 1601 ntAPPRIS P1 TSL 1 (best) BASIC12.22□□□□□ -0.45
Cdkn1aP39689 Wdr90-201ENSMUST00000079461 5991 ntAPPRIS P2 TSL 5 BASIC12.22□□□□□ -0.45
Cdkn1aP39689 AC164565.1-201ENSMUST00000217520 1484 ntBASIC12.22□□□□□ -0.45
Cdkn1aP39689 Adam11-201ENSMUST00000068150 5102 ntAPPRIS ALT2 TSL 1 (best) BASIC12.22□□□□□ -0.45
Cdkn1aP39689 Gm11738-201ENSMUST00000134069 2158 ntTSL 1 (best) BASIC12.22□□□□□ -0.45
Cdkn1aP39689 Gm31774-201ENSMUST00000212910 1366 ntTSL 1 (best) BASIC12.22□□□□□ -0.45
Cdkn1aP39689 Hacd3-201ENSMUST00000036615 2709 ntAPPRIS P1 TSL 1 (best) BASIC12.22□□□□□ -0.45
Cdkn1aP39689 Gm5089-201ENSMUST00000081580 2008 ntAPPRIS P1 TSL 1 (best) BASIC12.22□□□□□ -0.45
Cdkn1aP39689 Rhpn1-201ENSMUST00000023244 1932 ntAPPRIS P3 TSL 1 (best) BASIC12.22□□□□□ -0.45
Cdkn1aP39689 Gm25287-201ENSMUST00000103846 110 ntBASIC12.22□□□□□ -0.45
Cdkn1aP39689 Gm22918-201ENSMUST00000103855 110 ntBASIC12.22□□□□□ -0.45
Cdkn1aP39689 4930544D05Rik-203ENSMUST00000144960 624 ntAPPRIS P2 TSL 5 BASIC12.22□□□□□ -0.45
Cdkn1aP39689 Gm13431-203ENSMUST00000147012 388 ntTSL 2 BASIC12.22□□□□□ -0.45
Cdkn1aP39689 Nespas-202ENSMUST00000150276 1262 ntTSL 1 (best) BASIC12.22□□□□□ -0.45
Cdkn1aP39689 Gm42560-201ENSMUST00000201216 1023 ntTSL 1 (best) BASIC12.22□□□□□ -0.45
Cdkn1aP39689 Arf5-201ENSMUST00000020717 1116 ntAPPRIS P1 TSL 1 (best) BASIC12.22□□□□□ -0.45
Cdkn1aP39689 Pomc-201ENSMUST00000020990 1031 ntAPPRIS P1 TSL 1 (best) BASIC12.22□□□□□ -0.45
Cdkn1aP39689 AC159114.1-201ENSMUST00000220349 266 ntBASIC12.22□□□□□ -0.45
Cdkn1aP39689 Treml1-204ENSMUST00000224001 1220 ntAPPRIS P2 BASIC12.22□□□□□ -0.45
Cdkn1aP39689 Rps10-201ENSMUST00000025052 519 ntTSL 1 (best) BASIC12.22□□□□□ -0.45
Cdkn1aP39689 Slc4a5-202ENSMUST00000113899 5039 ntAPPRIS ALT2 TSL 5 BASIC12.22□□□□□ -0.45
Cdkn1aP39689 Pqlc1-204ENSMUST00000129043 1864 ntAPPRIS ALT2 TSL 1 (best) BASIC12.22□□□□□ -0.45
Cdkn1aP39689 Gm37812-201ENSMUST00000195216 2475 ntBASIC12.22□□□□□ -0.45
Cdkn1aP39689 Dnmt3b-201ENSMUST00000056495 4318 ntAPPRIS ALT2 TSL 5 BASIC12.22□□□□□ -0.45
Cdkn1aP39689 Ica1l-201ENSMUST00000027172 3650 ntAPPRIS P2 TSL 1 (best) BASIC12.22□□□□□ -0.45
Cdkn1aP39689 Lrp4-201ENSMUST00000028689 7926 ntAPPRIS P1 TSL 1 (best) BASIC12.22□□□□□ -0.45
Cdkn1aP39689 Rbm26-202ENSMUST00000100327 3634 ntAPPRIS P1 TSL 1 (best) BASIC12.22□□□□□ -0.45
Cdkn1aP39689 Sez6-202ENSMUST00000093995 4239 ntAPPRIS P3 TSL 1 (best) BASIC12.22□□□□□ -0.45
Cdkn1aP39689 Sox1ot-202ENSMUST00000186174 7420 ntTSL 5 BASIC12.22□□□□□ -0.45
Cdkn1aP39689 Nap1l4-206ENSMUST00000208190 2259 ntAPPRIS P1 TSL 1 (best) BASIC12.22□□□□□ -0.45
Cdkn1aP39689 Synrg-207ENSMUST00000183456 3990 ntAPPRIS ALT2 TSL 5 BASIC12.22□□□□□ -0.45
Cdkn1aP39689 Vav1-204ENSMUST00000169220 2810 ntAPPRIS ALT2 TSL 1 (best) BASIC12.22□□□□□ -0.45
Cdkn1aP39689 Syne3-201ENSMUST00000067005 5097 ntAPPRIS ALT2 TSL 1 (best) BASIC12.22□□□□□ -0.45
Cdkn1aP39689 Ddi2-201ENSMUST00000102484 9553 ntAPPRIS P1 TSL 1 (best) BASIC12.22□□□□□ -0.45
Cdkn1aP39689 Gm12866-201ENSMUST00000128998 1671 ntTSL 2 BASIC12.22□□□□□ -0.45
Cdkn1aP39689 Tcta-201ENSMUST00000044725 1668 ntTSL 1 (best) BASIC12.22□□□□□ -0.45
Cdkn1aP39689 Tmem82-201ENSMUST00000053263 1671 ntAPPRIS P1 TSL 1 (best) BASIC12.22□□□□□ -0.45
Cdkn1aP39689 Slc8b1-202ENSMUST00000076051 2661 ntTSL 1 (best) BASIC12.22□□□□□ -0.45
Cdkn1aP39689 Tmem33-204ENSMUST00000161369 6164 ntAPPRIS P3 TSL 1 (best) BASIC12.22□□□□□ -0.45
Cdkn1aP39689 Pcbp3-201ENSMUST00000001148 2013 ntAPPRIS P3 TSL 1 (best) BASIC12.21□□□□□ -0.45
Cdkn1aP39689 Slc22a7-201ENSMUST00000087012 2007 ntAPPRIS P1 TSL 1 (best) BASIC12.21□□□□□ -0.45
Cdkn1aP39689 Stat3-207ENSMUST00000138438 2506 ntTSL 5 BASIC12.21□□□□□ -0.45
Cdkn1aP39689 Slc24a3-202ENSMUST00000110007 4048 ntAPPRIS ALT2 TSL 1 (best) BASIC12.21□□□□□ -0.45
Cdkn1aP39689 Abhd3-203ENSMUST00000117828 1962 ntTSL 1 (best) BASIC12.21□□□□□ -0.45
Cdkn1aP39689 Endou-202ENSMUST00000100249 2405 ntAPPRIS ALT2 TSL 1 (best) BASIC12.21□□□□□ -0.45
Cdkn1aP39689 Tmem94-201ENSMUST00000093912 5329 ntAPPRIS P2 TSL 1 (best) BASIC12.21□□□□□ -0.45
Cdkn1aP39689 2810408A11Rik-202ENSMUST00000100969 1437 ntAPPRIS ALT2 TSL 1 (best) BASIC12.21□□□□□ -0.45
Cdkn1aP39689 Bhlhb9-201ENSMUST00000068755 2823 ntAPPRIS P1 TSL 1 (best) BASIC12.21□□□□□ -0.45
Cdkn1aP39689 Miip-202ENSMUST00000119975 1879 ntAPPRIS ALT2 TSL 1 (best) BASIC12.21□□□□□ -0.45
Cdkn1aP39689 Ppp6r2-208ENSMUST00000228284 3297 ntAPPRIS P1 BASIC12.21□□□□□ -0.45
Cdkn1aP39689 Wdr45b-201ENSMUST00000026173 2321 ntAPPRIS P1 TSL 1 (best) BASIC12.21□□□□□ -0.45
Cdkn1aP39689 Egfl7-212ENSMUST00000166920 1391 ntAPPRIS P4 TSL 1 (best) BASIC12.21□□□□□ -0.45
Cdkn1aP39689 Cadps2-206ENSMUST00000115361 4571 ntAPPRIS ALT2 TSL 1 (best) BASIC12.21□□□□□ -0.45
Cdkn1aP39689 Kdm6a-201ENSMUST00000044484 5918 ntAPPRIS P1 TSL 5 BASIC12.21□□□□□ -0.45
Cdkn1aP39689 Kdm6a-202ENSMUST00000052368 5935 ntTSL 1 (best) BASIC12.21□□□□□ -0.45
Cdkn1aP39689 Slc35c1-202ENSMUST00000125276 2668 ntTSL 1 (best) BASIC12.21□□□□□ -0.45
Cdkn1aP39689 Myo9b-201ENSMUST00000071935 7082 ntAPPRIS P3 TSL 5 BASIC12.21□□□□□ -0.45
Cdkn1aP39689 Kdm7a-201ENSMUST00000002305 9566 ntAPPRIS P1 TSL 1 (best) BASIC12.21□□□□□ -0.45
Cdkn1aP39689 Arhgef40-204ENSMUST00000182061 4756 ntAPPRIS ALT2 TSL 1 (best) BASIC12.21□□□□□ -0.45
Cdkn1aP39689 Ropn1l-201ENSMUST00000110408 957 ntAPPRIS P1 TSL 1 (best) BASIC12.21□□□□□ -0.45
Cdkn1aP39689 Apip-201ENSMUST00000011055 919 ntAPPRIS P1 TSL 1 (best) BASIC12.21□□□□□ -0.45
Cdkn1aP39689 Cops9-202ENSMUST00000112999 653 ntTSL 3 BASIC12.21□□□□□ -0.45
Cdkn1aP39689 Dph3-205ENSMUST00000124303 809 ntTSL 2 BASIC12.21□□□□□ -0.45
Cdkn1aP39689 Arpp19-210ENSMUST00000170308 429 ntAPPRIS P1 TSL 2 BASIC12.21□□□□□ -0.45
Cdkn1aP39689 Skiv2l-ps1-201ENSMUST00000173935 658 ntBASIC12.21□□□□□ -0.45
Cdkn1aP39689 Gm20509-201ENSMUST00000174203 1016 ntAPPRIS P1 TSL 5 BASIC12.21□□□□□ -0.45
Cdkn1aP39689 Gm22175-201ENSMUST00000175007 78 ntBASIC12.21□□□□□ -0.45
Cdkn1aP39689 Auts2-212ENSMUST00000178555 309 ntBASIC12.21□□□□□ -0.45
Cdkn1aP39689 Cacng2-201ENSMUST00000019290 5510 ntAPPRIS P1 TSL 1 (best) BASIC12.21□□□□□ -0.45
Cdkn1aP39689 1700128F08Rik-202ENSMUST00000213708 717 ntBASIC12.21□□□□□ -0.45
Cdkn1aP39689 Gm5779-201ENSMUST00000218467 910 ntBASIC12.21□□□□□ -0.45
Cdkn1aP39689 Gzma-201ENSMUST00000023897 878 ntAPPRIS P2 TSL 1 (best) BASIC12.21□□□□□ -0.45
Cdkn1aP39689 Olfr324-201ENSMUST00000054683 1122 ntAPPRIS P2 BASIC12.21□□□□□ -0.45
Cdkn1aP39689 Gm10313-201ENSMUST00000095320 1002 ntBASIC12.21□□□□□ -0.45
Cdkn1aP39689 Itsn1-202ENSMUST00000064797 7418 ntAPPRIS ALT2 TSL 5 BASIC12.21□□□□□ -0.45
Cdkn1aP39689 Ralgds-203ENSMUST00000113893 3683 ntAPPRIS ALT2 TSL 1 (best) BASIC12.21□□□□□ -0.46
Retrieved 100 of 76,532 protein–RNA pairs in 38.9 ms