Protein–RNA interactions for Protein: P39061

Col18a1, Collagen alpha-1(XVIII) chain, mousemouse

Predictions only

Length 1,774 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Col18a1P39061 Cmc4-203ENSMUST00000149863 507 ntAPPRIS P1 TSL 3 BASIC19.34■□□□□ 0.69
Col18a1P39061 Gm6152-201ENSMUST00000151704 340 ntBASIC19.34■□□□□ 0.69
Col18a1P39061 D930030I03Rik-201ENSMUST00000180735 920 ntTSL 1 (best) BASIC19.34■□□□□ 0.69
Col18a1P39061 Fcrl1-204ENSMUST00000191666 925 ntAPPRIS ALT2 TSL 1 (best) BASIC19.34■□□□□ 0.69
Col18a1P39061 Rbbp9-201ENSMUST00000028915 2170 ntAPPRIS P1 TSL 1 (best) BASIC19.34■□□□□ 0.69
Col18a1P39061 Rerg-202ENSMUST00000117919 2262 ntAPPRIS P1 TSL 1 (best) BASIC19.34■□□□□ 0.69
Col18a1P39061 Psmd12-201ENSMUST00000021063 1904 ntAPPRIS P1 TSL 1 (best) BASIC19.34■□□□□ 0.69
Col18a1P39061 Gm17705-201ENSMUST00000172285 1555 ntTSL 1 (best) BASIC19.33■□□□□ 0.69
Col18a1P39061 Hs3st2-201ENSMUST00000084628 2278 ntAPPRIS P1 TSL 1 (best) BASIC19.33■□□□□ 0.69
Col18a1P39061 Opn5-201ENSMUST00000068355 1824 ntAPPRIS P1 TSL 1 (best) BASIC19.33■□□□□ 0.69
Col18a1P39061 Far2os1-201ENSMUST00000162391 555 ntTSL 2 BASIC19.33■□□□□ 0.68
Col18a1P39061 Fbxw4-209ENSMUST00000162433 789 ntTSL 3 BASIC19.33■□□□□ 0.68
Col18a1P39061 Cd180-203ENSMUST00000170878 842 ntTSL 3 BASIC19.33■□□□□ 0.68
Col18a1P39061 Cd180-205ENSMUST00000172138 518 ntTSL 2 BASIC19.33■□□□□ 0.68
Col18a1P39061 Gm4271-201ENSMUST00000174444 973 ntBASIC19.33■□□□□ 0.68
Col18a1P39061 Gm27682-201ENSMUST00000183930 110 ntBASIC19.33■□□□□ 0.68
Col18a1P39061 Gm37714-201ENSMUST00000194742 342 ntBASIC19.33■□□□□ 0.68
Col18a1P39061 Mpv17-209ENSMUST00000202241 903 ntAPPRIS ALT1 TSL 3 BASIC19.33■□□□□ 0.68
Col18a1P39061 4933435G04Rik-201ENSMUST00000205892 2108 ntBASIC19.33■□□□□ 0.68
Col18a1P39061 Ormdl2-204ENSMUST00000219524 724 ntAPPRIS P1 TSL 2 BASIC19.33■□□□□ 0.68
Col18a1P39061 Ppia-206ENSMUST00000213200 1450 ntTSL 5 BASIC19.33■□□□□ 0.68
Col18a1P39061 Hoxd12-201ENSMUST00000001878 2534 ntAPPRIS P1 TSL 1 (best) BASIC19.33■□□□□ 0.68
Col18a1P39061 Nisch-201ENSMUST00000022469 5559 ntAPPRIS P3 TSL 2 BASIC19.33■□□□□ 0.68
Col18a1P39061 2610027K06Rik-203ENSMUST00000140673 2076 ntTSL 5 BASIC19.33■□□□□ 0.68
Col18a1P39061 Bean1-203ENSMUST00000167633 3275 ntAPPRIS ALT2 TSL 5 BASIC19.33■□□□□ 0.68
Col18a1P39061 Zufsp-205ENSMUST00000218880 2005 ntTSL 5 BASIC19.33■□□□□ 0.68
Col18a1P39061 Tbxas1-201ENSMUST00000003017 1990 ntAPPRIS P1 TSL 1 (best) BASIC19.32■□□□□ 0.68
Col18a1P39061 Hemk1-202ENSMUST00000118051 453 ntTSL 3 BASIC19.32■□□□□ 0.68
Col18a1P39061 Hnf4aos-203ENSMUST00000141329 839 ntTSL 1 (best) BASIC19.32■□□□□ 0.68
Col18a1P39061 Gm44608-201ENSMUST00000206827 855 ntBASIC19.32■□□□□ 0.68
Col18a1P39061 Rabl6-201ENSMUST00000058137 3230 ntAPPRIS P1 TSL 1 (best) BASIC19.32■□□□□ 0.68
Col18a1P39061 Esyt2-201ENSMUST00000100986 5560 ntAPPRIS P1 TSL 1 (best) BASIC19.32■□□□□ 0.68
Col18a1P39061 Tex264-201ENSMUST00000046735 1391 ntAPPRIS P1 TSL 1 (best) BASIC19.32■□□□□ 0.68
Col18a1P39061 Gm13342-201ENSMUST00000121055 207 ntBASIC19.32■□□□□ 0.68
Col18a1P39061 Gm12843-201ENSMUST00000137607 601 ntTSL 3 BASIC19.32■□□□□ 0.68
Col18a1P39061 2010106C02Rik-201ENSMUST00000191222 660 ntTSL 1 (best) BASIC19.32■□□□□ 0.68
Col18a1P39061 Gm9176-201ENSMUST00000219955 1120 ntBASIC19.32■□□□□ 0.68
Col18a1P39061 AC134335.2-201ENSMUST00000227660 440 ntBASIC19.32■□□□□ 0.68
Col18a1P39061 Pitpnm1-201ENSMUST00000049658 4206 ntAPPRIS P1 TSL 1 (best) BASIC19.31■□□□□ 0.68
Col18a1P39061 Tead3-201ENSMUST00000114799 2448 ntAPPRIS P2 TSL 1 (best) BASIC19.31■□□□□ 0.68
Col18a1P39061 Gmcl1-201ENSMUST00000001185 2949 ntAPPRIS P1 TSL 1 (best) BASIC19.31■□□□□ 0.68
Col18a1P39061 Hadhb-201ENSMUST00000026841 2033 ntAPPRIS P1 TSL 1 (best) BASIC19.31■□□□□ 0.68
Col18a1P39061 Nfkbia-201ENSMUST00000021413 1578 ntAPPRIS P1 TSL 1 (best) BASIC19.31■□□□□ 0.68
Col18a1P39061 Cbx4-201ENSMUST00000026665 5179 ntAPPRIS P1 TSL 1 (best) BASIC19.31■□□□□ 0.68
Col18a1P39061 AC121598.2-201ENSMUST00000228376 2325 ntBASIC19.31■□□□□ 0.68
Col18a1P39061 Wdr53-201ENSMUST00000023474 1394 ntAPPRIS P1 TSL 1 (best) BASIC19.31■□□□□ 0.68
Col18a1P39061 Gm13385-201ENSMUST00000121089 220 ntBASIC19.31■□□□□ 0.68
Col18a1P39061 Ighv8-14-201ENSMUST00000196781 358 ntBASIC19.31■□□□□ 0.68
Col18a1P39061 Gm29705-201ENSMUST00000212598 474 ntBASIC19.31■□□□□ 0.68
Col18a1P39061 Lsm7-208ENSMUST00000220225 1129 ntTSL 1 (best) BASIC19.31■□□□□ 0.68
Col18a1P39061 CR974585.1-201ENSMUST00000221790 1263 ntTSL 1 (best) BASIC19.31■□□□□ 0.68
Col18a1P39061 AC166997.1-201ENSMUST00000225122 572 ntBASIC19.31■□□□□ 0.68
Col18a1P39061 AC132317.1-201ENSMUST00000227227 962 ntBASIC19.31■□□□□ 0.68
Col18a1P39061 Aen-201ENSMUST00000107421 2007 ntAPPRIS ALT2 TSL 1 (best) BASIC19.31■□□□□ 0.68
Col18a1P39061 Gatsl3-201ENSMUST00000020699 1574 ntAPPRIS P1 TSL 1 (best) BASIC19.31■□□□□ 0.68
Col18a1P39061 Sec63-201ENSMUST00000019937 6032 ntAPPRIS P1 TSL 1 (best) BASIC19.3■□□□□ 0.68
Col18a1P39061 Cep295nl-201ENSMUST00000103024 1944 ntAPPRIS P1 TSL 1 (best) BASIC19.3■□□□□ 0.68
Col18a1P39061 Gm22323-201ENSMUST00000103832 109 ntBASIC19.3■□□□□ 0.68
Col18a1P39061 Rph3al-203ENSMUST00000108420 695 ntTSL 3 BASIC19.3■□□□□ 0.68
Col18a1P39061 Gm43068-201ENSMUST00000201095 1273 ntBASIC19.3■□□□□ 0.68
Col18a1P39061 Gm18027-201ENSMUST00000218947 619 ntBASIC19.3■□□□□ 0.68
Col18a1P39061 Mindy4-203ENSMUST00000204842 2211 ntTSL 1 (best) BASIC19.3■□□□□ 0.68
Col18a1P39061 Pom121-201ENSMUST00000111171 5580 ntAPPRIS P1 TSL 1 (best) BASIC19.3■□□□□ 0.68
Col18a1P39061 Pou6f1-202ENSMUST00000073837 4953 ntTSL 1 (best) BASIC19.3■□□□□ 0.68
Col18a1P39061 Mark2-209ENSMUST00000165965 2874 ntAPPRIS P4 TSL 1 (best) BASIC19.3■□□□□ 0.68
Col18a1P39061 Dnajb11-204ENSMUST00000166487 2534 ntAPPRIS P1 TSL 1 (best) BASIC19.3■□□□□ 0.68
Col18a1P39061 Gbe1-203ENSMUST00000163832 2984 ntAPPRIS P5 TSL 5 BASIC19.3■□□□□ 0.68
Col18a1P39061 Kdelc2-201ENSMUST00000037853 3642 ntAPPRIS P1 TSL 1 (best) BASIC19.29■□□□□ 0.68
Col18a1P39061 Gm12203-201ENSMUST00000118235 598 ntBASIC19.29■□□□□ 0.68
Col18a1P39061 Gm12209-201ENSMUST00000120089 596 ntBASIC19.29■□□□□ 0.68
Col18a1P39061 Gm10156-201ENSMUST00000122364 462 ntBASIC19.29■□□□□ 0.68
Col18a1P39061 Ssr4-208ENSMUST00000166518 800 ntAPPRIS ALT2 TSL 1 (best) BASIC19.29■□□□□ 0.68
Col18a1P39061 Ccdc70-201ENSMUST00000017193 1054 ntAPPRIS P1 TSL 1 (best) BASIC19.29■□□□□ 0.68
Col18a1P39061 1600017P15Rik-202ENSMUST00000193960 890 ntBASIC19.29■□□□□ 0.68
Col18a1P39061 Gm44397-201ENSMUST00000195950 113 ntBASIC19.29■□□□□ 0.68
Col18a1P39061 Sct-204ENSMUST00000211667 506 ntAPPRIS ALT2 TSL 2 BASIC19.29■□□□□ 0.68
Col18a1P39061 St13-201ENSMUST00000023039 1089 ntTSL 5 BASIC19.29■□□□□ 0.68
Col18a1P39061 Mien1-201ENSMUST00000002655 747 ntAPPRIS P1 TSL 1 (best) BASIC19.29■□□□□ 0.68
Col18a1P39061 Cdk2-201ENSMUST00000026415 2240 ntAPPRIS P1 TSL 1 (best) BASIC19.29■□□□□ 0.68
Col18a1P39061 Pias2-201ENSMUST00000114776 2089 ntAPPRIS ALT2 TSL 1 (best) BASIC19.29■□□□□ 0.68
Col18a1P39061 Slc29a1-203ENSMUST00000097317 1931 ntAPPRIS ALT2 TSL 1 (best) BASIC19.29■□□□□ 0.68
Col18a1P39061 Cdkl3-209ENSMUST00000120374 2770 ntAPPRIS ALT2 TSL 5 BASIC19.29■□□□□ 0.68
Col18a1P39061 Ppm1m-201ENSMUST00000076258 1811 ntTSL 1 (best) BASIC19.29■□□□□ 0.68
Col18a1P39061 Ruvbl2-205ENSMUST00000211214 2312 ntAPPRIS P1 TSL 1 (best) BASIC19.29■□□□□ 0.68
Col18a1P39061 Pcbp3-201ENSMUST00000001148 2013 ntAPPRIS P3 TSL 1 (best) BASIC19.29■□□□□ 0.68
Col18a1P39061 Trim11-201ENSMUST00000093061 2251 ntAPPRIS P1 TSL 1 (best) BASIC19.29■□□□□ 0.68
Col18a1P39061 Kank3-201ENSMUST00000048560 2641 ntAPPRIS P1 TSL 1 (best) BASIC19.29■□□□□ 0.68
Col18a1P39061 Hypk-204ENSMUST00000126764 961 ntAPPRIS P1 TSL 1 (best) BASIC19.29■□□□□ 0.68
Col18a1P39061 Mb-202ENSMUST00000166179 1056 ntAPPRIS P1 TSL 1 (best) BASIC19.29■□□□□ 0.68
Col18a1P39061 Men1-210ENSMUST00000166909 295 ntTSL 3 BASIC19.29■□□□□ 0.68
Col18a1P39061 Mb-203ENSMUST00000169226 1106 ntAPPRIS P1 TSL 1 (best) BASIC19.29■□□□□ 0.68
Col18a1P39061 Aif1-206ENSMUST00000173324 875 ntAPPRIS P1 TSL 1 (best) BASIC19.29■□□□□ 0.68
Col18a1P39061 5430427M07Rik-202ENSMUST00000221524 1023 ntTSL 1 (best) BASIC19.29■□□□□ 0.68
Col18a1P39061 Cts7-204ENSMUST00000225321 1257 ntBASIC19.29■□□□□ 0.68
Col18a1P39061 AC155237.1-201ENSMUST00000226196 1279 ntBASIC19.29■□□□□ 0.68
Col18a1P39061 AC140406.1-201ENSMUST00000226481 465 ntBASIC19.29■□□□□ 0.68
Col18a1P39061 Haus8-202ENSMUST00000110071 1452 ntAPPRIS P3 TSL 1 (best) BASIC19.29■□□□□ 0.68
Col18a1P39061 Tlk2-201ENSMUST00000015107 3212 ntAPPRIS P3 TSL 5 BASIC19.29■□□□□ 0.68
Col18a1P39061 Ptp4a2-201ENSMUST00000030578 3646 ntAPPRIS P1 TSL 5 BASIC19.28■□□□□ 0.68
Col18a1P39061 Ilf2-201ENSMUST00000001042 2027 ntAPPRIS P1 TSL 1 (best) BASIC19.28■□□□□ 0.68
Retrieved 100 of 76,532 protein–RNA pairs in 41.9 ms