Protein–RNA interactions for Protein: P35951

Ldlr, Low-density lipoprotein receptor, mousemouse

Predictions only

Length 862 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LdlrP35951 Lpcat2-201ENSMUST00000046290 2811 ntAPPRIS P1 TSL 1 (best) BASIC14.76□□□□□ -0.05
LdlrP35951 Sox1ot-202ENSMUST00000186174 7420 ntTSL 5 BASIC14.76□□□□□ -0.05
LdlrP35951 Gm5837-201ENSMUST00000191844 1369 ntBASIC14.76□□□□□ -0.05
LdlrP35951 Ilkap-201ENSMUST00000027534 1368 ntAPPRIS P1 TSL 1 (best) BASIC14.76□□□□□ -0.05
LdlrP35951 Il11ra1-202ENSMUST00000108040 1837 ntAPPRIS P1 TSL 5 BASIC14.76□□□□□ -0.05
LdlrP35951 A230087F16Rik-202ENSMUST00000181561 1303 ntTSL 1 (best) BASIC14.76□□□□□ -0.05
LdlrP35951 Gm17018-201ENSMUST00000047057 1345 ntAPPRIS P1 TSL 1 (best) BASIC14.76□□□□□ -0.05
LdlrP35951 Plcxd1-201ENSMUST00000086687 1346 ntAPPRIS P1 TSL 1 (best) BASIC14.76□□□□□ -0.05
LdlrP35951 Las1l-202ENSMUST00000113864 2581 ntAPPRIS ALT2 TSL 5 BASIC14.76□□□□□ -0.05
LdlrP35951 Zfyve27-201ENSMUST00000099443 2573 ntAPPRIS ALT2 TSL 1 (best) BASIC14.76□□□□□ -0.05
LdlrP35951 Cnn2-202ENSMUST00000105374 926 ntTSL 5 BASIC14.76□□□□□ -0.05
LdlrP35951 Hoxd3-203ENSMUST00000111983 2968 ntAPPRIS P1 TSL 1 (best) BASIC14.76□□□□□ -0.05
LdlrP35951 Gm14494-201ENSMUST00000118786 435 ntBASIC14.76□□□□□ -0.05
LdlrP35951 Btf3-204ENSMUST00000134542 780 ntAPPRIS P1 TSL 2 BASIC14.76□□□□□ -0.05
LdlrP35951 Nat8b-ps-201ENSMUST00000162660 699 ntBASIC14.76□□□□□ -0.05
LdlrP35951 Coa3-201ENSMUST00000017332 886 ntAPPRIS P1 TSL 1 (best) BASIC14.76□□□□□ -0.05
LdlrP35951 Nptn-211ENSMUST00000177064 582 ntTSL 5 BASIC14.76□□□□□ -0.05
LdlrP35951 Gm21887-203ENSMUST00000180251 531 ntAPPRIS P5 TSL 5 BASIC14.76□□□□□ -0.05
LdlrP35951 Gm29456-201ENSMUST00000189894 768 ntTSL 3 BASIC14.76□□□□□ -0.05
LdlrP35951 Ucn-202ENSMUST00000201184 499 ntAPPRIS P1 TSL 1 (best) BASIC14.76□□□□□ -0.05
LdlrP35951 Gm44123-201ENSMUST00000204662 577 ntTSL 5 BASIC14.76□□□□□ -0.05
LdlrP35951 D530033B14Rik-201ENSMUST00000205412 546 ntTSL 5 BASIC14.76□□□□□ -0.05
LdlrP35951 AC164441.1-201ENSMUST00000221369 1004 ntTSL 5 BASIC14.76□□□□□ -0.05
LdlrP35951 AC154222.1-201ENSMUST00000223882 475 ntBASIC14.76□□□□□ -0.05
LdlrP35951 Parm1-201ENSMUST00000040576 5068 ntAPPRIS P1 TSL 1 (best) BASIC14.76□□□□□ -0.05
LdlrP35951 Slc43a1-203ENSMUST00000111625 2487 ntAPPRIS P4 TSL 1 (best) BASIC14.76□□□□□ -0.05
LdlrP35951 Gstz1-205ENSMUST00000222885 1571 ntTSL 1 (best) BASIC14.76□□□□□ -0.05
LdlrP35951 4933426K07Rik-201ENSMUST00000143009 1548 ntTSL 1 (best) BASIC14.76□□□□□ -0.05
LdlrP35951 Rgs6-216ENSMUST00000200911 2626 ntAPPRIS ALT2 TSL 1 (best) BASIC14.76□□□□□ -0.05
LdlrP35951 Aldh1a3-203ENSMUST00000174209 1496 ntTSL 1 (best) BASIC14.76□□□□□ -0.05
LdlrP35951 Ttll11-201ENSMUST00000028248 3176 ntAPPRIS P2 TSL 1 (best) BASIC14.75□□□□□ -0.05
LdlrP35951 Gm21451-201ENSMUST00000111062 2775 ntBASIC14.75□□□□□ -0.05
LdlrP35951 Fbxl19-207ENSMUST00000206893 3449 ntAPPRIS ALT2 TSL 5 BASIC14.75□□□□□ -0.05
LdlrP35951 Gatm-201ENSMUST00000028624 2389 ntAPPRIS P1 TSL 1 (best) BASIC14.75□□□□□ -0.05
LdlrP35951 Mapt-203ENSMUST00000106989 2250 ntAPPRIS ALT2 TSL 5 BASIC14.75□□□□□ -0.05
LdlrP35951 Myef2-206ENSMUST00000142718 2942 ntAPPRIS ALT2 TSL 5 BASIC14.75□□□□□ -0.05
LdlrP35951 Dmkn-203ENSMUST00000085688 1926 ntAPPRIS ALT2 TSL 1 (best) BASIC14.75□□□□□ -0.05
LdlrP35951 Ndufs7-202ENSMUST00000105364 983 ntAPPRIS P1 TSL 5 BASIC14.75□□□□□ -0.05
LdlrP35951 Aig1-202ENSMUST00000105534 617 ntTSL 5 BASIC14.75□□□□□ -0.05
LdlrP35951 Nt5c-202ENSMUST00000106530 836 ntTSL 3 BASIC14.75□□□□□ -0.05
LdlrP35951 Tmsb4x-202ENSMUST00000112175 864 ntTSL 2 BASIC14.75□□□□□ -0.05
LdlrP35951 Ptpa-208ENSMUST00000131476 989 ntTSL 2 BASIC14.75□□□□□ -0.05
LdlrP35951 Tmem141-205ENSMUST00000142087 795 ntAPPRIS P1 TSL 1 (best) BASIC14.75□□□□□ -0.05
LdlrP35951 Gm43935-201ENSMUST00000203569 1050 ntBASIC14.75□□□□□ -0.05
LdlrP35951 Gm8655-201ENSMUST00000221159 852 ntBASIC14.75□□□□□ -0.05
LdlrP35951 AV026068-213ENSMUST00000223675 1171 ntBASIC14.75□□□□□ -0.05
LdlrP35951 Atp6v0b-201ENSMUST00000036380 1000 ntAPPRIS P1 TSL 1 (best) BASIC14.75□□□□□ -0.05
LdlrP35951 Mxra8os-201ENSMUST00000097740 687 ntBASIC14.75□□□□□ -0.05
LdlrP35951 Smg9-201ENSMUST00000002280 2242 ntAPPRIS P1 TSL 1 (best) BASIC14.75□□□□□ -0.05
LdlrP35951 Fgf9-201ENSMUST00000022545 1593 ntAPPRIS P1 TSL 1 (best) BASIC14.75□□□□□ -0.05
LdlrP35951 Sh2b2-201ENSMUST00000005188 2848 ntAPPRIS P1 TSL 1 (best) BASIC14.75□□□□□ -0.05
LdlrP35951 Chd3-201ENSMUST00000092971 6066 ntAPPRIS ALT2 TSL 5 BASIC14.75□□□□□ -0.05
LdlrP35951 Mdfic-203ENSMUST00000125326 3635 ntTSL 1 (best) BASIC14.75□□□□□ -0.05
LdlrP35951 Gnpat-201ENSMUST00000034466 2984 ntAPPRIS P1 TSL 1 (best) BASIC14.75□□□□□ -0.05
LdlrP35951 Mdga1-208ENSMUST00000171691 8339 ntAPPRIS ALT2 TSL 5 BASIC14.75□□□□□ -0.05
LdlrP35951 Ly9-201ENSMUST00000004827 2098 ntAPPRIS ALT2 TSL 1 (best) BASIC14.75□□□□□ -0.05
LdlrP35951 Stx5a-201ENSMUST00000010254 1780 ntAPPRIS ALT2 TSL 5 BASIC14.75□□□□□ -0.05
LdlrP35951 Camsap1-201ENSMUST00000091268 7978 ntAPPRIS ALT2 TSL 5 BASIC14.75□□□□□ -0.05
LdlrP35951 Tc2n-203ENSMUST00000160830 2005 ntAPPRIS P1 TSL 1 (best) BASIC14.75□□□□□ -0.05
LdlrP35951 Irs2-201ENSMUST00000040514 6323 ntAPPRIS P1 TSL 1 (best) BASIC14.75□□□□□ -0.05
LdlrP35951 Cep85l-205ENSMUST00000220443 7425 ntAPPRIS P2 TSL 5 BASIC14.75□□□□□ -0.05
LdlrP35951 Moxd1-201ENSMUST00000095784 3090 ntAPPRIS P1 TSL 1 (best) BASIC14.74□□□□□ -0.05
LdlrP35951 Tmem30b-201ENSMUST00000042975 2991 ntAPPRIS P1 BASIC14.74□□□□□ -0.05
LdlrP35951 Epha1-203ENSMUST00000204357 2948 ntTSL 5 BASIC14.74□□□□□ -0.05
LdlrP35951 Gipc2-201ENSMUST00000046614 1596 ntAPPRIS P1 TSL 1 (best) BASIC14.74□□□□□ -0.05
LdlrP35951 Cyb5r1-201ENSMUST00000027726 1837 ntAPPRIS P1 TSL 1 (best) BASIC14.74□□□□□ -0.05
LdlrP35951 Ftl2-ps-201ENSMUST00000118517 552 ntBASIC14.74□□□□□ -0.05
LdlrP35951 Gm14140-201ENSMUST00000119999 995 ntBASIC14.74□□□□□ -0.05
LdlrP35951 Gm15173-201ENSMUST00000122049 433 ntBASIC14.74□□□□□ -0.05
LdlrP35951 Gm12260-201ENSMUST00000122447 411 ntBASIC14.74□□□□□ -0.05
LdlrP35951 Evx1-202ENSMUST00000129243 1034 ntTSL 3 BASIC14.74□□□□□ -0.05
LdlrP35951 9130204K15Rik-201ENSMUST00000131441 867 ntTSL 5 BASIC14.74□□□□□ -0.05
LdlrP35951 Gm16838-201ENSMUST00000144594 816 ntTSL 1 (best) BASIC14.74□□□□□ -0.05
LdlrP35951 1700023H06Rik-201ENSMUST00000161006 1044 ntTSL 1 (best) BASIC14.74□□□□□ -0.05
LdlrP35951 Calcb-203ENSMUST00000182816 706 ntAPPRIS ALT2 TSL 5 BASIC14.74□□□□□ -0.05
LdlrP35951 Rps13-ps1-201ENSMUST00000183478 538 ntBASIC14.74□□□□□ -0.05
LdlrP35951 Chmp2a-201ENSMUST00000005711 949 ntAPPRIS P1 TSL 1 (best) BASIC14.74□□□□□ -0.05
LdlrP35951 Commd5-201ENSMUST00000068407 1037 ntAPPRIS P1 TSL 1 (best) BASIC14.74□□□□□ -0.05
LdlrP35951 Gm15590-201ENSMUST00000078419 552 ntBASIC14.74□□□□□ -0.05
LdlrP35951 Mrgpra9-201ENSMUST00000098436 1049 ntAPPRIS ALT2 TSL 5 BASIC14.74□□□□□ -0.05
LdlrP35951 Nkapl-201ENSMUST00000068235 1463 ntAPPRIS P1 BASIC14.74□□□□□ -0.05
LdlrP35951 1700034H15Rik-202ENSMUST00000139827 4354 ntTSL 5 BASIC14.74□□□□□ -0.05
LdlrP35951 Mettl27-202ENSMUST00000068617 1685 ntTSL 1 (best) BASIC14.74□□□□□ -0.05
LdlrP35951 Grip2-205ENSMUST00000162300 5206 ntAPPRIS P2 TSL 5 BASIC14.74□□□□□ -0.05
LdlrP35951 Hic1-201ENSMUST00000055619 3497 ntAPPRIS P1 TSL 1 (best) BASIC14.74□□□□□ -0.05
LdlrP35951 Rab3a-201ENSMUST00000034301 1363 ntAPPRIS P1 TSL 1 (best) BASIC14.73□□□□□ -0.05
LdlrP35951 Arpin-201ENSMUST00000048731 2277 ntAPPRIS P1 TSL 1 (best) BASIC14.73□□□□□ -0.05
LdlrP35951 Tsc22d4-203ENSMUST00000100540 2730 ntTSL 1 (best) BASIC14.73□□□□□ -0.05
LdlrP35951 Dcaf13-201ENSMUST00000022909 1551 ntAPPRIS P1 TSL 1 (best) BASIC14.73□□□□□ -0.05
LdlrP35951 Brd2-203ENSMUST00000114242 4483 ntAPPRIS P1 TSL 1 (best) BASIC14.73□□□□□ -0.05
LdlrP35951 Limk1-201ENSMUST00000015137 3331 ntAPPRIS P1 TSL 1 (best) BASIC14.73□□□□□ -0.05
LdlrP35951 Atp13a3-201ENSMUST00000061350 7220 ntAPPRIS ALT2 TSL 5 BASIC14.73□□□□□ -0.05
LdlrP35951 Sumo3-201ENSMUST00000020501 2630 ntAPPRIS P3 TSL 1 (best) BASIC14.73□□□□□ -0.05
LdlrP35951 Kitl-202ENSMUST00000105283 5648 ntAPPRIS P1 TSL 1 (best) BASIC14.73□□□□□ -0.05
LdlrP35951 Slc44a5-201ENSMUST00000089948 4098 ntAPPRIS P1 TSL 1 (best) BASIC14.73□□□□□ -0.05
LdlrP35951 Gm27177-203ENSMUST00000184034 1911 ntTSL 5 BASIC14.73□□□□□ -0.05
LdlrP35951 Cacna1g-201ENSMUST00000021234 8139 ntAPPRIS ALT2 TSL 5 BASIC14.73□□□□□ -0.05
LdlrP35951 1700008O03Rik-201ENSMUST00000107933 913 ntAPPRIS P1 TSL 1 (best) BASIC14.73□□□□□ -0.05
LdlrP35951 Mef2b-201ENSMUST00000110140 1223 ntAPPRIS ALT2 TSL 1 (best) BASIC14.73□□□□□ -0.05
LdlrP35951 Mef2b-202ENSMUST00000110141 1253 ntAPPRIS ALT2 TSL 1 (best) BASIC14.73□□□□□ -0.05
Retrieved 100 of 76,532 protein–RNA pairs in 29.1 ms