Protein–RNA interactions for Protein: P28862

Mmp3, Stromelysin-1, mousemouse

Predictions only

Length 477 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Mmp3P28862 Slc35f4-205ENSMUST00000146164 2480 ntTSL 1 (best) BASIC15.83■□□□□ 0.12
Mmp3P28862 Zbtb16-202ENSMUST00000216150 2505 ntAPPRIS P1 TSL 1 (best) BASIC15.83■□□□□ 0.12
Mmp3P28862 Gpsm1-202ENSMUST00000066936 3384 ntAPPRIS P3 TSL 1 (best) BASIC15.83■□□□□ 0.12
Mmp3P28862 Faf1-201ENSMUST00000102724 4468 ntAPPRIS P1 TSL 1 (best) BASIC15.82■□□□□ 0.12
Mmp3P28862 Hacd3-201ENSMUST00000036615 2709 ntAPPRIS P1 TSL 1 (best) BASIC15.82■□□□□ 0.12
Mmp3P28862 Mapk8ip3-201ENSMUST00000088345 5543 ntAPPRIS P3 TSL 1 (best) BASIC15.82■□□□□ 0.12
Mmp3P28862 Espnl-202ENSMUST00000176156 2886 ntTSL 5 BASIC15.82■□□□□ 0.12
Mmp3P28862 Snx8-205ENSMUST00000196566 1914 ntAPPRIS ALT2 TSL 5 BASIC15.82■□□□□ 0.12
Mmp3P28862 Htr3a-202ENSMUST00000217289 1987 ntAPPRIS ALT2 TSL 1 (best) BASIC15.82■□□□□ 0.12
Mmp3P28862 Aen-201ENSMUST00000107421 2007 ntAPPRIS ALT2 TSL 1 (best) BASIC15.82■□□□□ 0.12
Mmp3P28862 Lmbr1-204ENSMUST00000198105 2274 ntTSL 1 (best) BASIC15.82■□□□□ 0.12
Mmp3P28862 Rundc3b-201ENSMUST00000047485 3677 ntAPPRIS P3 TSL 1 (best) BASIC15.82■□□□□ 0.12
Mmp3P28862 Gm24543-201ENSMUST00000103867 82 ntBASIC15.82■□□□□ 0.12
Mmp3P28862 Mmab-202ENSMUST00000112245 644 ntTSL 3 BASIC15.82■□□□□ 0.12
Mmp3P28862 1700045H11Rik-201ENSMUST00000128056 593 ntTSL 1 (best) BASIC15.82■□□□□ 0.12
Mmp3P28862 Xrcc2-204ENSMUST00000134972 464 ntTSL 3 BASIC15.82■□□□□ 0.12
Mmp3P28862 2410080I02Rik-201ENSMUST00000142712 414 ntTSL 1 (best) BASIC15.82■□□□□ 0.12
Mmp3P28862 Ppt2-202ENSMUST00000166040 1139 ntAPPRIS P1 TSL 3 BASIC15.82■□□□□ 0.12
Mmp3P28862 Mir7684-201ENSMUST00000183858 60 ntBASIC15.82■□□□□ 0.12
Mmp3P28862 Gm27680-201ENSMUST00000184192 160 ntBASIC15.82■□□□□ 0.12
Mmp3P28862 Smim22-206ENSMUST00000184256 381 ntTSL 3 BASIC15.82■□□□□ 0.12
Mmp3P28862 Gm44344-201ENSMUST00000200287 129 ntBASIC15.82■□□□□ 0.12
Mmp3P28862 Olfr286-202ENSMUST00000205305 969 ntBASIC15.82■□□□□ 0.12
Mmp3P28862 Rpn2-201ENSMUST00000029171 2621 ntTSL 5 BASIC15.82■□□□□ 0.12
Mmp3P28862 Ttc13-202ENSMUST00000117624 3096 ntTSL 5 BASIC15.82■□□□□ 0.12
Mmp3P28862 Ttll9-202ENSMUST00000103155 1552 ntAPPRIS P3 TSL 1 (best) BASIC15.82■□□□□ 0.12
Mmp3P28862 Gatsl3-201ENSMUST00000020699 1574 ntAPPRIS P1 TSL 1 (best) BASIC15.82■□□□□ 0.12
Mmp3P28862 Slc35f1-201ENSMUST00000105473 4941 ntAPPRIS P1 TSL 1 (best) BASIC15.82■□□□□ 0.12
Mmp3P28862 Shroom1-204ENSMUST00000109013 3312 ntAPPRIS P3 TSL 1 (best) BASIC15.82■□□□□ 0.12
Mmp3P28862 Pde4d-204ENSMUST00000117879 1724 ntTSL 1 (best) BASIC15.82■□□□□ 0.12
Mmp3P28862 Cacna2d2-202ENSMUST00000085092 5183 ntAPPRIS P4 TSL 5 BASIC15.82■□□□□ 0.12
Mmp3P28862 Tmem204-201ENSMUST00000024984 1846 ntAPPRIS P1 TSL 1 (best) BASIC15.82■□□□□ 0.12
Mmp3P28862 Apol8-201ENSMUST00000070911 1838 ntAPPRIS P2 TSL 1 (best) BASIC15.82■□□□□ 0.12
Mmp3P28862 Rxrg-203ENSMUST00000111384 1967 ntAPPRIS P1 TSL 5 BASIC15.82■□□□□ 0.12
Mmp3P28862 H2afy2-201ENSMUST00000020283 2175 ntAPPRIS P1 TSL 1 (best) BASIC15.82■□□□□ 0.12
Mmp3P28862 Fnbp1-208ENSMUST00000113560 4726 ntAPPRIS P1 TSL 1 (best) BASIC15.82■□□□□ 0.12
Mmp3P28862 Dek-201ENSMUST00000021807 2556 ntAPPRIS P1 TSL 1 (best) BASIC15.82■□□□□ 0.12
Mmp3P28862 Bbs10-201ENSMUST00000040454 2744 ntAPPRIS P1 TSL 2 BASIC15.81■□□□□ 0.12
Mmp3P28862 Rtn1-202ENSMUST00000078505 3629 ntTSL 1 (best) BASIC15.81■□□□□ 0.12
Mmp3P28862 Med25-210ENSMUST00000208253 3693 ntAPPRIS P1 TSL 1 (best) BASIC15.81■□□□□ 0.12
Mmp3P28862 Taf10-203ENSMUST00000141116 4281 ntAPPRIS P1 TSL 1 (best) BASIC15.81■□□□□ 0.12
Mmp3P28862 Sptbn4-203ENSMUST00000108363 4724 ntTSL 1 (best) BASIC15.81■□□□□ 0.12
Mmp3P28862 Sptbn4-204ENSMUST00000108364 4740 ntTSL 1 (best) BASIC15.81■□□□□ 0.12
Mmp3P28862 Rock1-201ENSMUST00000067947 6187 ntAPPRIS P1 TSL 5 BASIC15.81■□□□□ 0.12
Mmp3P28862 Braf-201ENSMUST00000002487 9728 ntAPPRIS P1 TSL 1 (best) BASIC15.81■□□□□ 0.12
Mmp3P28862 Lcn5-202ENSMUST00000100312 660 ntAPPRIS ALT2 TSL 1 (best) BASIC15.81■□□□□ 0.12
Mmp3P28862 Rcn2-201ENSMUST00000114276 2024 ntAPPRIS P1 TSL 1 (best) BASIC15.81■□□□□ 0.12
Mmp3P28862 Slc35c1-202ENSMUST00000125276 2668 ntTSL 1 (best) BASIC15.81■□□□□ 0.12
Mmp3P28862 Gm11773-201ENSMUST00000138256 497 ntTSL 2 BASIC15.81■□□□□ 0.12
Mmp3P28862 Wfdc2-201ENSMUST00000017867 849 ntAPPRIS P2 TSL 1 (best) BASIC15.81■□□□□ 0.12
Mmp3P28862 Ssty1-201ENSMUST00000180056 699 ntAPPRIS P1 BASIC15.81■□□□□ 0.12
Mmp3P28862 Gm27437-201ENSMUST00000183429 107 ntBASIC15.81■□□□□ 0.12
Mmp3P28862 Gm29310-201ENSMUST00000185468 696 ntBASIC15.81■□□□□ 0.12
Mmp3P28862 Gm21825-201ENSMUST00000185728 696 ntBASIC15.81■□□□□ 0.12
Mmp3P28862 Gm29109-201ENSMUST00000185895 696 ntBASIC15.81■□□□□ 0.12
Mmp3P28862 Gm21896-201ENSMUST00000186520 696 ntBASIC15.81■□□□□ 0.12
Mmp3P28862 Gm21873-201ENSMUST00000186728 696 ntBASIC15.81■□□□□ 0.12
Mmp3P28862 Gm21794-201ENSMUST00000187056 696 ntBASIC15.81■□□□□ 0.12
Mmp3P28862 Gm21880-201ENSMUST00000187275 696 ntBASIC15.81■□□□□ 0.12
Mmp3P28862 Gm21826-201ENSMUST00000187451 696 ntBASIC15.81■□□□□ 0.12
Mmp3P28862 Gm21198-201ENSMUST00000188393 696 ntBASIC15.81■□□□□ 0.12
Mmp3P28862 Gm21749-201ENSMUST00000189343 696 ntBASIC15.81■□□□□ 0.12
Mmp3P28862 Gm21901-201ENSMUST00000189568 696 ntBASIC15.81■□□□□ 0.12
Mmp3P28862 Gm29424-201ENSMUST00000189716 696 ntBASIC15.81■□□□□ 0.12
Mmp3P28862 Gm28599-201ENSMUST00000189838 694 ntBASIC15.81■□□□□ 0.12
Mmp3P28862 Gm21867-201ENSMUST00000189917 696 ntBASIC15.81■□□□□ 0.12
Mmp3P28862 Gm29269-201ENSMUST00000190087 696 ntBASIC15.81■□□□□ 0.12
Mmp3P28862 Gm21722-201ENSMUST00000190153 696 ntBASIC15.81■□□□□ 0.12
Mmp3P28862 Gm28423-201ENSMUST00000190701 696 ntBASIC15.81■□□□□ 0.12
Mmp3P28862 Gm21899-201ENSMUST00000190745 696 ntBASIC15.81■□□□□ 0.12
Mmp3P28862 Gm21910-201ENSMUST00000191163 696 ntBASIC15.81■□□□□ 0.12
Mmp3P28862 Gm21849-201ENSMUST00000191571 696 ntBASIC15.81■□□□□ 0.12
Mmp3P28862 Gm28678-201ENSMUST00000191593 696 ntBASIC15.81■□□□□ 0.12
Mmp3P28862 Gm20910-201ENSMUST00000193268 696 ntBASIC15.81■□□□□ 0.12
Mmp3P28862 Gm37596-201ENSMUST00000193565 1021 ntAPPRIS P1 BASIC15.81■□□□□ 0.12
Mmp3P28862 Gm21871-201ENSMUST00000194621 696 ntBASIC15.81■□□□□ 0.12
Mmp3P28862 3110082I17Rik-204ENSMUST00000198474 2030 ntTSL 2 BASIC15.81■□□□□ 0.12
Mmp3P28862 Pde5a-204ENSMUST00000200389 7603 ntAPPRIS ALT2 TSL 5 BASIC15.81■□□□□ 0.12
Mmp3P28862 Olfr160-203ENSMUST00000215727 1667 ntAPPRIS P1 TSL 5 BASIC15.81■□□□□ 0.12
Mmp3P28862 AC090659.2-201ENSMUST00000225378 1186 ntBASIC15.81■□□□□ 0.12
Mmp3P28862 Asic1-205ENSMUST00000228185 1818 ntBASIC15.81■□□□□ 0.12
Mmp3P28862 Myl6b-201ENSMUST00000026428 1026 ntAPPRIS P1 TSL 1 (best) BASIC15.81■□□□□ 0.12
Mmp3P28862 Ggn-201ENSMUST00000033886 588 ntTSL 1 (best) BASIC15.81■□□□□ 0.12
Mmp3P28862 Apoa5-201ENSMUST00000034584 2312 ntAPPRIS P1 TSL 1 (best) BASIC15.81■□□□□ 0.12
Mmp3P28862 Coro1c-201ENSMUST00000004646 3491 ntAPPRIS P1 TSL 1 (best) BASIC15.81■□□□□ 0.12
Mmp3P28862 Tmem183a-201ENSMUST00000049470 3149 ntAPPRIS P1 TSL 1 (best) BASIC15.81■□□□□ 0.12
Mmp3P28862 Clec4g-202ENSMUST00000062037 1242 ntAPPRIS P1 TSL 1 (best) BASIC15.81■□□□□ 0.12
Mmp3P28862 Myl3-201ENSMUST00000079784 937 ntAPPRIS P2 TSL 1 (best) BASIC15.81■□□□□ 0.12
Mmp3P28862 Ptprd-206ENSMUST00000107289 9899 ntAPPRIS P1 TSL 5 BASIC15.81■□□□□ 0.12
Mmp3P28862 Ptprj-204ENSMUST00000168621 7634 ntAPPRIS P4 TSL 1 (best) BASIC15.81■□□□□ 0.12
Mmp3P28862 Gtf3c4-204ENSMUST00000171404 7127 ntTSL 1 (best) BASIC15.81■□□□□ 0.12
Mmp3P28862 Smarcd1-201ENSMUST00000023759 3153 ntAPPRIS P1 TSL 1 (best) BASIC15.81■□□□□ 0.12
Mmp3P28862 Map3k7-201ENSMUST00000037607 5773 ntAPPRIS ALT1 TSL 1 (best) BASIC15.81■□□□□ 0.12
Mmp3P28862 Trhde-201ENSMUST00000061632 5714 ntAPPRIS P1 TSL 1 (best) BASIC15.81■□□□□ 0.12
Mmp3P28862 Dnajc2-203ENSMUST00000115193 2416 ntTSL 1 (best) BASIC15.8■□□□□ 0.12
Mmp3P28862 Esrrb-201ENSMUST00000021680 2136 ntAPPRIS P1 TSL 5 BASIC15.8■□□□□ 0.12
Mmp3P28862 Zbtb14-203ENSMUST00000112676 3909 ntAPPRIS P1 TSL 1 (best) BASIC15.8■□□□□ 0.12
Mmp3P28862 Ripk3-203ENSMUST00000178399 1865 ntTSL 1 (best) BASIC15.8■□□□□ 0.12
Mmp3P28862 Efhd1-201ENSMUST00000027472 1854 ntAPPRIS P1 TSL 1 (best) BASIC15.8■□□□□ 0.12
Mmp3P28862 Ydjc-202ENSMUST00000115702 1713 ntTSL 5 BASIC15.8■□□□□ 0.12
Retrieved 100 of 76,532 protein–RNA pairs in 36.9 ms