Protein–RNA interactions for Protein: P25318

Col8a2, Collagen alpha-2(VIII) chain, mousemouse

Predictions only

Length 699 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Col8a2P25318 Gm9768-201ENSMUST00000206007 2861 ntBASIC12.38□□□□□ -0.43
Col8a2P25318 Fam228b-201ENSMUST00000053458 2851 ntAPPRIS P2 TSL 1 (best) BASIC12.38□□□□□ -0.43
Col8a2P25318 Tesk2-203ENSMUST00000106459 2444 ntTSL 1 (best) BASIC12.38□□□□□ -0.43
Col8a2P25318 Wt1-202ENSMUST00000111099 2441 ntTSL 5 BASIC12.38□□□□□ -0.43
Col8a2P25318 Gm26793-201ENSMUST00000180930 2732 ntTSL 1 (best) BASIC12.38□□□□□ -0.43
Col8a2P25318 Rasal2-201ENSMUST00000078308 10047 ntAPPRIS P2 TSL 1 (best) BASIC12.37□□□□□ -0.43
Col8a2P25318 P2rx3-203ENSMUST00000111616 1315 ntTSL 5 BASIC12.37□□□□□ -0.43
Col8a2P25318 Thap6-204ENSMUST00000193925 1337 ntTSL 1 (best) BASIC12.37□□□□□ -0.43
Col8a2P25318 Ccdc88a-201ENSMUST00000040182 9376 ntAPPRIS P1 TSL 5 BASIC12.37□□□□□ -0.43
Col8a2P25318 Zfp385a-201ENSMUST00000168828 2291 ntAPPRIS P1 TSL 1 (best) BASIC12.37□□□□□ -0.43
Col8a2P25318 AI661453-201ENSMUST00000037701 1410 ntAPPRIS ALT2 TSL 1 (best) BASIC12.37□□□□□ -0.43
Col8a2P25318 Faf1-201ENSMUST00000102724 4468 ntAPPRIS P1 TSL 1 (best) BASIC12.37□□□□□ -0.43
Col8a2P25318 Xpo6-201ENSMUST00000009344 4455 ntAPPRIS P3 TSL 1 (best) BASIC12.37□□□□□ -0.43
Col8a2P25318 Spsb1-203ENSMUST00000105685 1537 ntAPPRIS P1 TSL 1 (best) BASIC12.37□□□□□ -0.43
Col8a2P25318 Thap12-201ENSMUST00000033009 3723 ntAPPRIS P1 TSL 1 (best) BASIC12.37□□□□□ -0.43
Col8a2P25318 P2ry2-206ENSMUST00000208340 2693 ntAPPRIS P1 TSL 1 (best) BASIC12.37□□□□□ -0.43
Col8a2P25318 Aldh3a1-201ENSMUST00000019246 1729 ntAPPRIS P1 TSL 1 (best) BASIC12.37□□□□□ -0.43
Col8a2P25318 Cyb5r1-201ENSMUST00000027726 1837 ntAPPRIS P1 TSL 1 (best) BASIC12.37□□□□□ -0.43
Col8a2P25318 Ppm1m-201ENSMUST00000076258 1811 ntTSL 1 (best) BASIC12.37□□□□□ -0.43
Col8a2P25318 Lgi3-201ENSMUST00000047331 3174 ntAPPRIS P1 TSL 1 (best) BASIC12.37□□□□□ -0.43
Col8a2P25318 Daxx-208ENSMUST00000174541 2325 ntAPPRIS ALT2 TSL 5 BASIC12.37□□□□□ -0.43
Col8a2P25318 Jade2-202ENSMUST00000109090 6230 ntAPPRIS ALT2 TSL 1 (best) BASIC12.37□□□□□ -0.43
Col8a2P25318 Fbxo44-202ENSMUST00000105705 1034 ntTSL 2 BASIC12.37□□□□□ -0.43
Col8a2P25318 Plekhb1-202ENSMUST00000107043 931 ntTSL 2 BASIC12.37□□□□□ -0.43
Col8a2P25318 Gm13616-201ENSMUST00000120600 222 ntBASIC12.37□□□□□ -0.43
Col8a2P25318 Gm12017-201ENSMUST00000122453 1003 ntBASIC12.37□□□□□ -0.43
Col8a2P25318 Platr13-201ENSMUST00000133945 375 ntTSL 5 BASIC12.37□□□□□ -0.43
Col8a2P25318 Gm5779-201ENSMUST00000218467 910 ntBASIC12.37□□□□□ -0.43
Col8a2P25318 Dnal1-201ENSMUST00000046340 790 ntTSL 1 (best) BASIC12.37□□□□□ -0.43
Col8a2P25318 Rcn3-201ENSMUST00000019683 1462 ntAPPRIS P1 TSL 1 (best) BASIC12.37□□□□□ -0.43
Col8a2P25318 Rcn3-208ENSMUST00000211352 1453 ntAPPRIS P1 TSL 1 (best) BASIC12.37□□□□□ -0.43
Col8a2P25318 Zfp318-201ENSMUST00000113481 7850 ntAPPRIS P4 TSL 5 BASIC12.37□□□□□ -0.43
Col8a2P25318 Kat8-201ENSMUST00000033070 1579 ntAPPRIS P1 TSL 1 (best) BASIC12.37□□□□□ -0.43
Col8a2P25318 Gm12866-201ENSMUST00000128998 1671 ntTSL 2 BASIC12.37□□□□□ -0.43
Col8a2P25318 Lamp2-201ENSMUST00000016678 1769 ntAPPRIS ALT2 TSL 1 (best) BASIC12.37□□□□□ -0.43
Col8a2P25318 Itpripl1-201ENSMUST00000110386 1898 ntAPPRIS P1 TSL 1 (best) BASIC12.37□□□□□ -0.43
Col8a2P25318 Gm28756-202ENSMUST00000209405 2461 ntTSL 5 BASIC12.37□□□□□ -0.43
Col8a2P25318 Plekhn1-201ENSMUST00000105569 3014 ntAPPRIS P1 TSL 1 (best) BASIC12.37□□□□□ -0.43
Col8a2P25318 Gm10584-201ENSMUST00000207036 2628 ntBASIC12.37□□□□□ -0.43
Col8a2P25318 Vwa5b2-203ENSMUST00000100074 2512 ntAPPRIS P3 TSL 1 (best) BASIC12.37□□□□□ -0.43
Col8a2P25318 Rps3-201ENSMUST00000032998 1908 ntAPPRIS P1 TSL 1 (best) BASIC12.37□□□□□ -0.43
Col8a2P25318 Gata1-201ENSMUST00000033502 1902 ntAPPRIS P1 TSL 1 (best) BASIC12.37□□□□□ -0.43
Col8a2P25318 BC026585-201ENSMUST00000046743 1618 ntAPPRIS P1 TSL 1 (best) BASIC12.37□□□□□ -0.43
Col8a2P25318 Gm26850-201ENSMUST00000181653 2669 ntTSL 1 (best) BASIC12.36□□□□□ -0.43
Col8a2P25318 Vps26a-202ENSMUST00000105447 2597 ntAPPRIS P1 TSL 1 (best) BASIC12.36□□□□□ -0.43
Col8a2P25318 Mdm1-202ENSMUST00000163238 2461 ntAPPRIS ALT2 TSL 1 (best) BASIC12.36□□□□□ -0.43
Col8a2P25318 Rhoj-202ENSMUST00000118602 2396 ntTSL 1 (best) BASIC12.36□□□□□ -0.43
Col8a2P25318 Iars2-201ENSMUST00000027921 5471 ntAPPRIS P1 TSL 1 (best) BASIC12.36□□□□□ -0.43
Col8a2P25318 Kcnj8-201ENSMUST00000032374 2269 ntTSL 1 (best) BASIC12.36□□□□□ -0.43
Col8a2P25318 Pttg1ip-201ENSMUST00000009435 2294 ntAPPRIS P2 TSL 1 (best) BASIC12.36□□□□□ -0.43
Col8a2P25318 Slc30a10-201ENSMUST00000061093 5836 ntAPPRIS P1 TSL 1 (best) BASIC12.36□□□□□ -0.43
Col8a2P25318 Tubb3-201ENSMUST00000071134 1868 ntAPPRIS P1 TSL 1 (best) BASIC12.36□□□□□ -0.43
Col8a2P25318 Gpsm1-203ENSMUST00000078616 3127 ntTSL 1 (best) BASIC12.36□□□□□ -0.43
Col8a2P25318 Ece2-204ENSMUST00000133344 3042 ntAPPRIS ALT1 TSL 1 (best) BASIC12.36□□□□□ -0.43
Col8a2P25318 Samd4-211ENSMUST00000228404 3039 ntAPPRIS ALT2 BASIC12.36□□□□□ -0.43
Col8a2P25318 Slit1-201ENSMUST00000025993 5045 ntAPPRIS P1 TSL 1 (best) BASIC12.36□□□□□ -0.43
Col8a2P25318 Senp6-202ENSMUST00000164859 3853 ntAPPRIS ALT2 TSL 1 (best) BASIC12.36□□□□□ -0.43
Col8a2P25318 Tmem40-202ENSMUST00000112946 1554 ntAPPRIS ALT2 TSL 1 (best) BASIC12.36□□□□□ -0.43
Col8a2P25318 Adcy3-207ENSMUST00000152065 4728 ntAPPRIS ALT1 TSL 1 (best) BASIC12.36□□□□□ -0.43
Col8a2P25318 Gm26688-201ENSMUST00000181176 1568 ntTSL 1 (best) BASIC12.36□□□□□ -0.43
Col8a2P25318 Rab3a-202ENSMUST00000110090 1375 ntAPPRIS P1 TSL 3 BASIC12.36□□□□□ -0.43
Col8a2P25318 Arhgef1-218ENSMUST00000206508 3195 ntAPPRIS ALT2 TSL 1 (best) BASIC12.36□□□□□ -0.43
Col8a2P25318 Tex22-202ENSMUST00000109729 735 ntAPPRIS P1 TSL 1 (best) BASIC12.36□□□□□ -0.43
Col8a2P25318 Apip-201ENSMUST00000011055 919 ntAPPRIS P1 TSL 1 (best) BASIC12.36□□□□□ -0.43
Col8a2P25318 Slc36a3os-201ENSMUST00000155883 520 ntTSL 1 (best) BASIC12.36□□□□□ -0.43
Col8a2P25318 Gm27920-201ENSMUST00000183953 96 ntBASIC12.36□□□□□ -0.43
Col8a2P25318 Gm37277-201ENSMUST00000194052 1111 ntBASIC12.36□□□□□ -0.43
Col8a2P25318 6030443J06Rik-204ENSMUST00000195898 786 ntTSL 1 (best) BASIC12.36□□□□□ -0.43
Col8a2P25318 Klrg2-202ENSMUST00000201345 1225 ntAPPRIS ALT2 TSL 5 BASIC12.36□□□□□ -0.43
Col8a2P25318 Gm5312-201ENSMUST00000203728 547 ntBASIC12.36□□□□□ -0.43
Col8a2P25318 5830408C22Rik-201ENSMUST00000210072 1115 ntTSL 5 BASIC12.36□□□□□ -0.43
Col8a2P25318 AC153527.1-201ENSMUST00000220412 602 ntTSL 1 (best) BASIC12.36□□□□□ -0.43
Col8a2P25318 Treml1-204ENSMUST00000224001 1220 ntAPPRIS P2 BASIC12.36□□□□□ -0.43
Col8a2P25318 Alkbh7-201ENSMUST00000002737 917 ntAPPRIS P1 TSL 1 (best) BASIC12.36□□□□□ -0.43
Col8a2P25318 Prg3-201ENSMUST00000028466 949 ntAPPRIS P1 TSL 1 (best) BASIC12.36□□□□□ -0.43
Col8a2P25318 Cyhr1-201ENSMUST00000066677 1163 ntTSL 1 (best) BASIC12.36□□□□□ -0.43
Col8a2P25318 Gm10313-201ENSMUST00000095320 1002 ntBASIC12.36□□□□□ -0.43
Col8a2P25318 Hist2h3b-201ENSMUST00000098843 488 ntAPPRIS P1 BASIC12.36□□□□□ -0.43
Col8a2P25318 Espnl-201ENSMUST00000088904 5445 ntAPPRIS P1 TSL 1 (best) BASIC12.36□□□□□ -0.43
Col8a2P25318 Sowaha-201ENSMUST00000104955 3702 ntAPPRIS P1 BASIC12.36□□□□□ -0.43
Col8a2P25318 Sema3b-202ENSMUST00000102529 2875 ntAPPRIS P1 TSL 1 (best) BASIC12.36□□□□□ -0.43
Col8a2P25318 Tbc1d16-203ENSMUST00000207655 2855 ntAPPRIS ALT2 TSL 1 (best) BASIC12.36□□□□□ -0.43
Col8a2P25318 Snx8-205ENSMUST00000196566 1914 ntAPPRIS ALT2 TSL 5 BASIC12.36□□□□□ -0.43
Col8a2P25318 Selenon-201ENSMUST00000060435 3445 ntAPPRIS P1 TSL 5 BASIC12.36□□□□□ -0.43
Col8a2P25318 Slc6a8-203ENSMUST00000114465 3314 ntAPPRIS P1 TSL 1 (best) BASIC12.36□□□□□ -0.43
Col8a2P25318 Sept6-203ENSMUST00000115239 1845 ntTSL 1 (best) BASIC12.36□□□□□ -0.43
Col8a2P25318 Chst2-201ENSMUST00000036267 7328 ntAPPRIS P1 TSL 1 (best) BASIC12.36□□□□□ -0.43
Col8a2P25318 Frmd5-207ENSMUST00000138157 4230 ntTSL 1 (best) BASIC12.36□□□□□ -0.43
Col8a2P25318 Krt74-201ENSMUST00000088018 1648 ntAPPRIS P1 TSL 2 BASIC12.36□□□□□ -0.43
Col8a2P25318 Phyhip-201ENSMUST00000003561 2838 ntAPPRIS P1 TSL 1 (best) BASIC12.36□□□□□ -0.43
Col8a2P25318 Kcnn1-201ENSMUST00000110078 4047 ntAPPRIS P2 TSL 1 (best) BASIC12.36□□□□□ -0.43
Col8a2P25318 Kcnn1-202ENSMUST00000110081 4045 ntAPPRIS ALT2 TSL 5 BASIC12.36□□□□□ -0.43
Col8a2P25318 Sbk2-205ENSMUST00000208109 1422 ntTSL 5 BASIC12.36□□□□□ -0.43
Col8a2P25318 Erlec1-201ENSMUST00000073192 2532 ntAPPRIS P1 TSL 1 (best) BASIC12.36□□□□□ -0.43
Col8a2P25318 Camk2d-226ENSMUST00000199300 5524 ntTSL 1 (best) BASIC12.36□□□□□ -0.43
Col8a2P25318 Usp33-202ENSMUST00000117492 3886 ntAPPRIS ALT2 TSL 1 (best) BASIC12.36□□□□□ -0.43
Col8a2P25318 Prkcd-207ENSMUST00000112210 2777 ntAPPRIS P3 TSL 1 (best) BASIC12.35□□□□□ -0.43
Col8a2P25318 Gpd2-202ENSMUST00000112618 5759 ntTSL 5 BASIC12.35□□□□□ -0.43
Col8a2P25318 Rbm22-201ENSMUST00000025506 2210 ntAPPRIS P1 TSL 1 (best) BASIC12.35□□□□□ -0.43
Col8a2P25318 Agbl5-213ENSMUST00000201917 3579 ntAPPRIS ALT2 TSL 1 (best) BASIC12.35□□□□□ -0.43
Retrieved 100 of 76,532 protein–RNA pairs in 17.2 ms