Protein–RNA interactions for Protein: P23198

Cbx3, Chromobox protein homolog 3, mousemouse

Known RBP Predictions only

Length 183 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Cbx3P23198 Ifnlr1-201ENSMUST00000074408 4182 ntAPPRIS P1 TSL 1 (best) BASIC13.53□□□□□ -0.24
Cbx3P23198 Cacna1g-209ENSMUST00000107791 8002 ntAPPRIS ALT2 TSL 5 BASIC13.53□□□□□ -0.24
Cbx3P23198 Rbak-201ENSMUST00000049861 3335 ntAPPRIS P1 TSL 1 (best) BASIC13.53□□□□□ -0.24
Cbx3P23198 AC154855.1-201ENSMUST00000227353 1458 ntBASIC13.53□□□□□ -0.24
Cbx3P23198 Sp9-201ENSMUST00000090813 4514 ntAPPRIS P1 TSL 1 (best) BASIC13.53□□□□□ -0.24
Cbx3P23198 Cdc73-201ENSMUST00000018337 11586 ntAPPRIS P1 TSL 1 (best) BASIC13.53□□□□□ -0.24
Cbx3P23198 Rbbp8-201ENSMUST00000047322 3618 ntAPPRIS P1 TSL 1 (best) BASIC13.53□□□□□ -0.24
Cbx3P23198 Dnase1l1-201ENSMUST00000019232 1625 ntAPPRIS P1 TSL 1 (best) BASIC13.53□□□□□ -0.24
Cbx3P23198 Rnf168-201ENSMUST00000014218 3932 ntAPPRIS ALT2 TSL 1 (best) BASIC13.53□□□□□ -0.24
Cbx3P23198 Pax6-201ENSMUST00000090391 2869 ntAPPRIS P3 TSL 1 (best) BASIC13.53□□□□□ -0.24
Cbx3P23198 Nkain3-201ENSMUST00000102998 3098 ntTSL 1 (best) BASIC13.53□□□□□ -0.24
Cbx3P23198 Trim52-201ENSMUST00000022708 3075 ntAPPRIS P1 BASIC13.53□□□□□ -0.24
Cbx3P23198 Fam3a-206ENSMUST00000114143 1899 ntAPPRIS P1 TSL 1 (best) BASIC13.53□□□□□ -0.24
Cbx3P23198 Chga-201ENSMUST00000021610 1883 ntAPPRIS P1 TSL 1 (best) BASIC13.53□□□□□ -0.24
Cbx3P23198 Acvrl1-204ENSMUST00000120028 1932 ntAPPRIS P1 TSL 1 (best) BASIC13.52□□□□□ -0.24
Cbx3P23198 Fam133b-205ENSMUST00000197082 1943 ntAPPRIS ALT2 TSL 5 BASIC13.52□□□□□ -0.24
Cbx3P23198 Mb21d1-201ENSMUST00000034898 3231 ntTSL 1 (best) BASIC13.52□□□□□ -0.24
Cbx3P23198 Gm42872-201ENSMUST00000200026 1967 ntBASIC13.52□□□□□ -0.24
Cbx3P23198 Nfatc1-202ENSMUST00000078049 4607 ntAPPRIS ALT2 TSL 1 (best) BASIC13.52□□□□□ -0.24
Cbx3P23198 Cpne6-202ENSMUST00000163767 2004 ntAPPRIS P3 TSL 1 (best) BASIC13.52□□□□□ -0.24
Cbx3P23198 Rnf44-201ENSMUST00000037422 3734 ntTSL 1 (best) BASIC13.52□□□□□ -0.24
Cbx3P23198 Miga1-205ENSMUST00000199397 2842 ntTSL 1 (best) BASIC13.52□□□□□ -0.24
Cbx3P23198 Mta2-201ENSMUST00000096240 3135 ntAPPRIS P1 TSL 1 (best) BASIC13.52□□□□□ -0.24
Cbx3P23198 Ddx31-201ENSMUST00000113853 3271 ntAPPRIS P1 TSL 1 (best) BASIC13.52□□□□□ -0.24
Cbx3P23198 Akap17b-201ENSMUST00000051906 6003 ntAPPRIS P1 TSL 5 BASIC13.52□□□□□ -0.25
Cbx3P23198 Tmem30a-201ENSMUST00000034878 3658 ntAPPRIS P2 TSL 1 (best) BASIC13.52□□□□□ -0.25
Cbx3P23198 Smim14-202ENSMUST00000121661 1056 ntAPPRIS P1 TSL 3 BASIC13.52□□□□□ -0.25
Cbx3P23198 1110046J04Rik-201ENSMUST00000147622 397 ntTSL 3 BASIC13.52□□□□□ -0.25
Cbx3P23198 Gm43353-201ENSMUST00000199224 1295 ntBASIC13.52□□□□□ -0.25
Cbx3P23198 Gm21814-202ENSMUST00000203277 873 ntBASIC13.52□□□□□ -0.25
Cbx3P23198 Cib1-207ENSMUST00000206084 772 ntTSL 3 BASIC13.52□□□□□ -0.25
Cbx3P23198 Prss21-201ENSMUST00000024928 1094 ntAPPRIS P1 TSL 1 (best) BASIC13.52□□□□□ -0.25
Cbx3P23198 Cib1-202ENSMUST00000071457 702 ntTSL 1 (best) BASIC13.52□□□□□ -0.25
Cbx3P23198 Mpdu1-201ENSMUST00000018905 1321 ntAPPRIS P1 TSL 1 (best) BASIC13.52□□□□□ -0.25
Cbx3P23198 Eif5-202ENSMUST00000166123 4050 ntAPPRIS P2 TSL 1 (best) BASIC13.52□□□□□ -0.25
Cbx3P23198 R3hdm2-212ENSMUST00000166820 4281 ntAPPRIS P2 TSL 5 BASIC13.52□□□□□ -0.25
Cbx3P23198 Bpifb5-201ENSMUST00000045959 1637 ntAPPRIS P1 TSL 1 (best) BASIC13.52□□□□□ -0.25
Cbx3P23198 Kptn-201ENSMUST00000006178 1630 ntAPPRIS P1 TSL 1 (best) BASIC13.52□□□□□ -0.25
Cbx3P23198 Hpse2-201ENSMUST00000099428 1779 ntAPPRIS P1 TSL 1 (best) BASIC13.52□□□□□ -0.25
Cbx3P23198 Acvrl1-203ENSMUST00000119063 1818 ntAPPRIS P1 TSL 1 (best) BASIC13.52□□□□□ -0.25
Cbx3P23198 Gm42706-201ENSMUST00000199733 1910 ntBASIC13.52□□□□□ -0.25
Cbx3P23198 Gm36447-201ENSMUST00000201101 1978 ntTSL 1 (best) BASIC13.52□□□□□ -0.25
Cbx3P23198 Ppef2-201ENSMUST00000031359 2274 ntAPPRIS P1 TSL 1 (best) BASIC13.52□□□□□ -0.25
Cbx3P23198 Clcn4-203ENSMUST00000210061 2445 ntAPPRIS ALT2 TSL 1 (best) BASIC13.52□□□□□ -0.25
Cbx3P23198 Dnpep-203ENSMUST00000185419 2833 ntTSL 1 (best) BASIC13.52□□□□□ -0.25
Cbx3P23198 Vmn1r45-207ENSMUST00000228492 2849 ntBASIC13.52□□□□□ -0.25
Cbx3P23198 Kcnn1-204ENSMUST00000212086 2964 ntAPPRIS ALT2 TSL 1 (best) BASIC13.52□□□□□ -0.25
Cbx3P23198 Dmbx1-201ENSMUST00000064806 5799 ntAPPRIS P2 TSL 1 (best) BASIC13.52□□□□□ -0.25
Cbx3P23198 Il1r1-202ENSMUST00000114795 4832 ntAPPRIS ALT2 TSL 1 (best) BASIC13.51□□□□□ -0.25
Cbx3P23198 Kmt5b-205ENSMUST00000113972 4159 ntAPPRIS ALT2 TSL 5 BASIC13.51□□□□□ -0.25
Cbx3P23198 Kmt5b-207ENSMUST00000113974 4150 ntAPPRIS P3 TSL 5 BASIC13.51□□□□□ -0.25
Cbx3P23198 Mrpl3-201ENSMUST00000035177 3972 ntAPPRIS P1 TSL 1 (best) BASIC13.51□□□□□ -0.25
Cbx3P23198 Podn-202ENSMUST00000106708 2947 ntAPPRIS P1 TSL 1 (best) BASIC13.51□□□□□ -0.25
Cbx3P23198 Txnrd3-201ENSMUST00000000828 2836 ntAPPRIS P1 TSL 1 (best) BASIC13.51□□□□□ -0.25
Cbx3P23198 Ociad2-201ENSMUST00000087195 2554 ntAPPRIS P1 TSL 1 (best) BASIC13.51□□□□□ -0.25
Cbx3P23198 Fkbp4-201ENSMUST00000032508 2217 ntAPPRIS P1 TSL 1 (best) BASIC13.51□□□□□ -0.25
Cbx3P23198 Syngr3-201ENSMUST00000007236 1965 ntAPPRIS P1 TSL 1 (best) BASIC13.51□□□□□ -0.25
Cbx3P23198 Sil1-201ENSMUST00000025215 1695 ntAPPRIS P1 TSL 1 (best) BASIC13.51□□□□□ -0.25
Cbx3P23198 Nrn1-201ENSMUST00000037623 1619 ntAPPRIS P1 TSL 1 (best) BASIC13.51□□□□□ -0.25
Cbx3P23198 Skap1-203ENSMUST00000100521 1539 ntTSL 1 (best) BASIC13.51□□□□□ -0.25
Cbx3P23198 Skap1-204ENSMUST00000103154 1507 ntAPPRIS P3 TSL 1 (best) BASIC13.51□□□□□ -0.25
Cbx3P23198 Sema6c-201ENSMUST00000090821 3933 ntAPPRIS P3 TSL 5 BASIC13.51□□□□□ -0.25
Cbx3P23198 Hilpda-202ENSMUST00000115289 658 ntAPPRIS P1 TSL 3 BASIC13.51□□□□□ -0.25
Cbx3P23198 Gm15510-201ENSMUST00000123644 1172 ntTSL 1 (best) BASIC13.51□□□□□ -0.25
Cbx3P23198 Pabpc1l2b-ps-201ENSMUST00000124538 690 ntBASIC13.51□□□□□ -0.25
Cbx3P23198 Zfp629-207ENSMUST00000134446 670 ntTSL 1 (best) BASIC13.51□□□□□ -0.25
Cbx3P23198 Gm2274-201ENSMUST00000184539 609 ntBASIC13.51□□□□□ -0.25
Cbx3P23198 Gm42884-202ENSMUST00000202523 423 ntTSL 3 BASIC13.51□□□□□ -0.25
Cbx3P23198 Zfp787-204ENSMUST00000207628 576 ntTSL 1 (best) BASIC13.51□□□□□ -0.25
Cbx3P23198 Fgfr1op2-202ENSMUST00000058245 918 ntTSL 2 BASIC13.51□□□□□ -0.25
Cbx3P23198 Olfr464-201ENSMUST00000074874 1084 ntAPPRIS P1 BASIC13.51□□□□□ -0.25
Cbx3P23198 Gm5417-201ENSMUST00000079706 384 ntBASIC13.51□□□□□ -0.25
Cbx3P23198 Ubiad1-201ENSMUST00000051633 2992 ntAPPRIS P1 TSL 1 (best) BASIC13.51□□□□□ -0.25
Cbx3P23198 Nrp2-204ENSMUST00000102822 6708 ntAPPRIS ALT2 TSL 1 (best) BASIC13.51□□□□□ -0.25
Cbx3P23198 Rinl-201ENSMUST00000059857 2871 ntAPPRIS P1 TSL 1 (best) BASIC13.51□□□□□ -0.25
Cbx3P23198 Adarb1-201ENSMUST00000020496 6549 ntAPPRIS P1 TSL 1 (best) BASIC13.51□□□□□ -0.25
Cbx3P23198 Vopp1-204ENSMUST00000145608 4590 ntTSL 1 (best) BASIC13.51□□□□□ -0.25
Cbx3P23198 Fam131a-201ENSMUST00000056518 2432 ntAPPRIS P1 TSL 1 (best) BASIC13.51□□□□□ -0.25
Cbx3P23198 Srrm1-203ENSMUST00000105861 3797 ntAPPRIS ALT2 TSL 5 BASIC13.51□□□□□ -0.25
Cbx3P23198 Gm14066-201ENSMUST00000134801 2057 ntTSL 1 (best) BASIC13.51□□□□□ -0.25
Cbx3P23198 Esm1-201ENSMUST00000038144 2097 ntAPPRIS P1 TSL 1 (best) BASIC13.51□□□□□ -0.25
Cbx3P23198 Tle3-204ENSMUST00000159386 4527 ntAPPRIS ALT2 TSL 5 BASIC13.51□□□□□ -0.25
Cbx3P23198 Gak-201ENSMUST00000046603 4453 ntAPPRIS P1 TSL 1 (best) BASIC13.51□□□□□ -0.25
Cbx3P23198 Mettl27-205ENSMUST00000111221 1796 ntTSL 1 (best) BASIC13.5□□□□□ -0.25
Cbx3P23198 Tjp3-205ENSMUST00000219479 2901 ntAPPRIS P1 TSL 1 (best) BASIC13.5□□□□□ -0.25
Cbx3P23198 Dcakd-201ENSMUST00000021313 1744 ntAPPRIS P1 TSL 1 (best) BASIC13.5□□□□□ -0.25
Cbx3P23198 Ankrd61-201ENSMUST00000079624 1720 ntAPPRIS ALT2 TSL 1 (best) BASIC13.5□□□□□ -0.25
Cbx3P23198 Otud4-203ENSMUST00000173286 7213 ntAPPRIS ALT2 TSL 1 (best) BASIC13.5□□□□□ -0.25
Cbx3P23198 Fam198a-203ENSMUST00000214536 2789 ntTSL 1 (best) BASIC13.5□□□□□ -0.25
Cbx3P23198 Aldh16a1-201ENSMUST00000107815 2685 ntTSL 1 (best) BASIC13.5□□□□□ -0.25
Cbx3P23198 Nxph1-201ENSMUST00000060369 2578 ntAPPRIS P1 TSL 1 (best) BASIC13.5□□□□□ -0.25
Cbx3P23198 Nub1-202ENSMUST00000197407 3546 ntAPPRIS ALT2 TSL 1 (best) BASIC13.5□□□□□ -0.25
Cbx3P23198 Smim13-201ENSMUST00000165561 4483 ntAPPRIS P1 TSL 1 (best) BASIC13.5□□□□□ -0.25
Cbx3P23198 Sox11-201ENSMUST00000079063 8311 ntAPPRIS P1 BASIC13.5□□□□□ -0.25
Cbx3P23198 Aptx-201ENSMUST00000030119 5250 ntAPPRIS ALT2 TSL 1 (best) BASIC13.5□□□□□ -0.25
Cbx3P23198 Otol1-201ENSMUST00000053013 2161 ntAPPRIS P1 TSL 1 (best) BASIC13.5□□□□□ -0.25
Cbx3P23198 Lamtor5-201ENSMUST00000145735 881 ntTSL 1 (best) BASIC13.5□□□□□ -0.25
Cbx3P23198 Tpsg1-202ENSMUST00000160377 1040 ntTSL 1 (best) BASIC13.5□□□□□ -0.25
Cbx3P23198 2310033P09Rik-201ENSMUST00000020719 1285 ntAPPRIS P1 TSL 1 (best) BASIC13.5□□□□□ -0.25
Cbx3P23198 Gm30025-201ENSMUST00000218555 728 ntBASIC13.5□□□□□ -0.25
Retrieved 100 of 76,532 protein–RNA pairs in 37.1 ms