Protein–RNA interactions for Protein: P21237

Bdnf, Brain-derived neurotrophic factor, mousemouse

Predictions only

Length 249 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
BdnfP21237 D530033B14Rik-201ENSMUST00000205412 546 ntTSL 5 BASIC14.23□□□□□ -0.13
BdnfP21237 Csrp2-207ENSMUST00000220409 780 ntTSL 2 BASIC14.23□□□□□ -0.13
BdnfP21237 4931422A03Rik-201ENSMUST00000056170 1037 ntAPPRIS P1 TSL 1 (best) BASIC14.23□□□□□ -0.13
BdnfP21237 Suv39h2-201ENSMUST00000027956 4327 ntAPPRIS P1 TSL 1 (best) BASIC14.23□□□□□ -0.13
BdnfP21237 Rxrb-202ENSMUST00000116612 2283 ntAPPRIS ALT2 TSL 1 (best) BASIC14.23□□□□□ -0.13
BdnfP21237 Pgd-201ENSMUST00000084124 2218 ntAPPRIS P1 TSL 1 (best) BASIC14.23□□□□□ -0.13
BdnfP21237 Pitx2-206ENSMUST00000174623 1493 ntTSL 2 BASIC14.23□□□□□ -0.13
BdnfP21237 Gpr137c-201ENSMUST00000146150 3917 ntAPPRIS P2 TSL 5 BASIC14.23□□□□□ -0.13
BdnfP21237 Edem3-201ENSMUST00000059498 6327 ntAPPRIS P1 TSL 1 (best) BASIC14.23□□□□□ -0.13
BdnfP21237 Dmkn-203ENSMUST00000085688 1926 ntAPPRIS ALT2 TSL 1 (best) BASIC14.23□□□□□ -0.13
BdnfP21237 Zbtb20-203ENSMUST00000114691 2891 ntAPPRIS ALT1 TSL 1 (best) BASIC14.23□□□□□ -0.13
BdnfP21237 Eif5a-207ENSMUST00000108610 1409 ntAPPRIS P1 TSL 1 (best) BASIC14.23□□□□□ -0.13
BdnfP21237 Dap3-202ENSMUST00000107491 1375 ntTSL 1 (best) BASIC14.22□□□□□ -0.13
BdnfP21237 Galnt6os-201ENSMUST00000160960 1389 ntTSL 1 (best) BASIC14.22□□□□□ -0.13
BdnfP21237 Crb2-201ENSMUST00000050372 6372 ntAPPRIS P1 TSL 5 BASIC14.22□□□□□ -0.13
BdnfP21237 Gldn-201ENSMUST00000056740 4658 ntAPPRIS P1 TSL 1 (best) BASIC14.22□□□□□ -0.13
BdnfP21237 Acot4-201ENSMUST00000021652 6203 ntAPPRIS P1 TSL 1 (best) BASIC14.22□□□□□ -0.13
BdnfP21237 Ralgapa2-211ENSMUST00000228797 8245 ntAPPRIS ALT2 BASIC14.22□□□□□ -0.13
BdnfP21237 Smo-201ENSMUST00000001812 3779 ntAPPRIS P1 TSL 1 (best) BASIC14.22□□□□□ -0.13
BdnfP21237 Bmper-201ENSMUST00000071982 3791 ntAPPRIS P1 TSL 1 (best) BASIC14.22□□□□□ -0.13
BdnfP21237 A230087F16Rik-202ENSMUST00000181561 1303 ntTSL 1 (best) BASIC14.22□□□□□ -0.13
BdnfP21237 Repin1-204ENSMUST00000135151 3057 ntAPPRIS ALT2 TSL 1 (best) BASIC14.22□□□□□ -0.13
BdnfP21237 Igsf21-201ENSMUST00000039331 1979 ntAPPRIS P1 TSL 1 (best) BASIC14.22□□□□□ -0.13
BdnfP21237 1110008P14Rik-202ENSMUST00000146423 2618 ntTSL 1 (best) BASIC14.22□□□□□ -0.13
BdnfP21237 Commd7-201ENSMUST00000071852 3210 ntAPPRIS P1 TSL 1 (best) BASIC14.22□□□□□ -0.13
BdnfP21237 Gm12008-201ENSMUST00000117791 755 ntBASIC14.22□□□□□ -0.13
BdnfP21237 Slc25a5-201ENSMUST00000016463 1240 ntAPPRIS P1 TSL 1 (best) BASIC14.22□□□□□ -0.13
BdnfP21237 Ucn-202ENSMUST00000201184 499 ntAPPRIS P1 TSL 1 (best) BASIC14.22□□□□□ -0.13
BdnfP21237 Gm32050-201ENSMUST00000209793 638 ntTSL 3 BASIC14.22□□□□□ -0.13
BdnfP21237 5830454E08Rik-202ENSMUST00000213974 744 ntBASIC14.22□□□□□ -0.13
BdnfP21237 AC110091.2-202ENSMUST00000216718 1148 ntTSL 5 BASIC14.22□□□□□ -0.13
BdnfP21237 AC159106.1-201ENSMUST00000224421 690 ntBASIC14.22□□□□□ -0.13
BdnfP21237 Ifi27-204ENSMUST00000079294 963 ntAPPRIS ALT2 TSL 1 (best) BASIC14.22□□□□□ -0.13
BdnfP21237 Zfp651-201ENSMUST00000093772 6353 ntAPPRIS P1 TSL 5 BASIC14.22□□□□□ -0.13
BdnfP21237 Bri3bp-201ENSMUST00000049040 6473 ntAPPRIS P1 TSL 1 (best) BASIC14.22□□□□□ -0.13
BdnfP21237 Adrb3-203ENSMUST00000121838 1864 ntAPPRIS P2 TSL 1 (best) BASIC14.22□□□□□ -0.13
BdnfP21237 Col8a2-201ENSMUST00000070132 4332 ntAPPRIS P1 TSL 1 (best) BASIC14.22□□□□□ -0.13
BdnfP21237 Rnf31-201ENSMUST00000019443 3485 ntAPPRIS P1 TSL 1 (best) BASIC14.22□□□□□ -0.13
BdnfP21237 Dffa-202ENSMUST00000103216 1835 ntTSL 1 (best) BASIC14.22□□□□□ -0.13
BdnfP21237 Tc2n-203ENSMUST00000160830 2005 ntAPPRIS P1 TSL 1 (best) BASIC14.22□□□□□ -0.13
BdnfP21237 Maged2-201ENSMUST00000026302 2207 ntAPPRIS P1 TSL 5 BASIC14.22□□□□□ -0.13
BdnfP21237 Lipo3-201ENSMUST00000025694 2768 ntAPPRIS P1 TSL 1 (best) BASIC14.22□□□□□ -0.13
BdnfP21237 Depdc1b-201ENSMUST00000051594 2563 ntAPPRIS P2 TSL 1 (best) BASIC14.22□□□□□ -0.13
BdnfP21237 Dcaf13-201ENSMUST00000022909 1551 ntAPPRIS P1 TSL 1 (best) BASIC14.22□□□□□ -0.13
BdnfP21237 4921514A10Rik-201ENSMUST00000181450 2114 ntTSL 5 BASIC14.21□□□□□ -0.13
BdnfP21237 Anks1b-204ENSMUST00000179337 2692 ntTSL 5 BASIC14.21□□□□□ -0.13
BdnfP21237 Plcxd1-201ENSMUST00000086687 1346 ntAPPRIS P1 TSL 1 (best) BASIC14.21□□□□□ -0.13
BdnfP21237 Gm21009-201ENSMUST00000197169 1669 ntBASIC14.21□□□□□ -0.13
BdnfP21237 Vav1-201ENSMUST00000005889 2963 ntAPPRIS P3 TSL 1 (best) BASIC14.21□□□□□ -0.13
BdnfP21237 Lrrfip1-204ENSMUST00000097650 2760 ntAPPRIS P3 TSL 1 (best) BASIC14.21□□□□□ -0.13
BdnfP21237 Scamp3-203ENSMUST00000120697 1475 ntAPPRIS ALT2 TSL 1 (best) BASIC14.21□□□□□ -0.13
BdnfP21237 Gm10489-201ENSMUST00000180511 1466 ntTSL 2 BASIC14.21□□□□□ -0.13
BdnfP21237 Tmem241-202ENSMUST00000055447 2597 ntAPPRIS ALT2 TSL 1 (best) BASIC14.21□□□□□ -0.13
BdnfP21237 9430038I01Rik-202ENSMUST00000117404 699 ntAPPRIS ALT2 TSL 5 BASIC14.21□□□□□ -0.13
BdnfP21237 Chchd7-203ENSMUST00000119307 889 ntAPPRIS P1 TSL 2 BASIC14.21□□□□□ -0.13
BdnfP21237 Gm16194-203ENSMUST00000141239 362 ntTSL 3 BASIC14.21□□□□□ -0.13
BdnfP21237 Epsti1-202ENSMUST00000169978 1175 ntAPPRIS ALT2 TSL 5 BASIC14.21□□□□□ -0.13
BdnfP21237 Gm44357-201ENSMUST00000195897 142 ntBASIC14.21□□□□□ -0.13
BdnfP21237 Gm19658-201ENSMUST00000196231 138 ntBASIC14.21□□□□□ -0.13
BdnfP21237 Gm44367-201ENSMUST00000196836 138 ntBASIC14.21□□□□□ -0.13
BdnfP21237 Gm44350-201ENSMUST00000197197 138 ntBASIC14.21□□□□□ -0.13
BdnfP21237 Gm44390-201ENSMUST00000197533 144 ntBASIC14.21□□□□□ -0.13
BdnfP21237 Gm44313-201ENSMUST00000198018 138 ntBASIC14.21□□□□□ -0.13
BdnfP21237 Gm44486-201ENSMUST00000198508 138 ntBASIC14.21□□□□□ -0.13
BdnfP21237 Gm44314-201ENSMUST00000199263 138 ntBASIC14.21□□□□□ -0.13
BdnfP21237 Gm44394-201ENSMUST00000199558 138 ntBASIC14.21□□□□□ -0.13
BdnfP21237 Gm44484-201ENSMUST00000199873 138 ntBASIC14.21□□□□□ -0.13
BdnfP21237 Gm44466-201ENSMUST00000200264 138 ntBASIC14.21□□□□□ -0.13
BdnfP21237 Gm44359-201ENSMUST00000200671 138 ntBASIC14.21□□□□□ -0.13
BdnfP21237 Gm26646-202ENSMUST00000205705 439 ntTSL 5 BASIC14.21□□□□□ -0.13
BdnfP21237 Pdcd6-201ENSMUST00000022060 1131 ntAPPRIS P2 TSL 1 (best) BASIC14.21□□□□□ -0.13
BdnfP21237 Epsti1-203ENSMUST00000227903 1178 ntAPPRIS ALT2 BASIC14.21□□□□□ -0.13
BdnfP21237 Tomm22-201ENSMUST00000023062 1031 ntAPPRIS P1 TSL 1 (best) BASIC14.21□□□□□ -0.13
BdnfP21237 Lce3f-201ENSMUST00000090863 611 ntAPPRIS P1 TSL 1 (best) BASIC14.21□□□□□ -0.13
BdnfP21237 Mapk9-201ENSMUST00000020634 4675 ntAPPRIS P3 TSL 1 (best) BASIC14.21□□□□□ -0.13
BdnfP21237 Mocos-201ENSMUST00000068006 2884 ntAPPRIS P1 TSL 1 (best) BASIC14.21□□□□□ -0.13
BdnfP21237 Gm7901-201ENSMUST00000120430 1597 ntBASIC14.21□□□□□ -0.14
BdnfP21237 Sema3b-201ENSMUST00000073448 2987 ntAPPRIS P1 TSL 1 (best) BASIC14.21□□□□□ -0.14
BdnfP21237 Ly9-201ENSMUST00000004827 2098 ntAPPRIS ALT2 TSL 1 (best) BASIC14.21□□□□□ -0.14
BdnfP21237 Ccer1-201ENSMUST00000060703 1865 ntAPPRIS P1 BASIC14.21□□□□□ -0.14
BdnfP21237 Pctp-201ENSMUST00000020864 2723 ntAPPRIS P1 TSL 1 (best) BASIC14.21□□□□□ -0.14
BdnfP21237 R3hdm4-202ENSMUST00000171416 1543 ntAPPRIS P1 TSL 1 (best) BASIC14.2□□□□□ -0.14
BdnfP21237 Iqck-201ENSMUST00000098087 1503 ntAPPRIS ALT2 TSL 5 BASIC14.2□□□□□ -0.14
BdnfP21237 Gm40377-201ENSMUST00000204604 2015 ntBASIC14.2□□□□□ -0.14
BdnfP21237 Psma3-202ENSMUST00000160027 2846 ntAPPRIS P1 TSL 1 (best) BASIC14.2□□□□□ -0.14
BdnfP21237 Lcat-201ENSMUST00000038896 1342 ntAPPRIS P1 TSL 1 (best) BASIC14.2□□□□□ -0.14
BdnfP21237 N6amt1-202ENSMUST00000118115 1951 ntTSL 1 (best) BASIC14.2□□□□□ -0.14
BdnfP21237 Rlf-201ENSMUST00000056635 6242 ntAPPRIS P2 TSL 5 BASIC14.2□□□□□ -0.14
BdnfP21237 Notch3-201ENSMUST00000087723 8044 ntAPPRIS P1 TSL 1 (best) BASIC14.2□□□□□ -0.14
BdnfP21237 Gm9932-201ENSMUST00000194154 2116 ntTSL 1 (best) BASIC14.2□□□□□ -0.14
BdnfP21237 5033426O07Rik-202ENSMUST00000212635 2110 ntTSL 5 BASIC14.2□□□□□ -0.14
BdnfP21237 Ube2o-201ENSMUST00000082152 5205 ntAPPRIS P1 TSL 1 (best) BASIC14.2□□□□□ -0.14
BdnfP21237 Gata4-201ENSMUST00000067417 3400 ntAPPRIS ALT2 TSL 1 (best) BASIC14.2□□□□□ -0.14
BdnfP21237 Gm38391-201ENSMUST00000191720 4069 ntBASIC14.2□□□□□ -0.14
BdnfP21237 Gjb3-202ENSMUST00000106091 1623 ntAPPRIS P1 TSL 1 (best) BASIC14.2□□□□□ -0.14
BdnfP21237 Tgfa-201ENSMUST00000032066 4527 ntAPPRIS P1 TSL 1 (best) BASIC14.2□□□□□ -0.14
BdnfP21237 Stx5a-201ENSMUST00000010254 1780 ntAPPRIS ALT2 TSL 5 BASIC14.2□□□□□ -0.14
BdnfP21237 Rnf180-203ENSMUST00000224662 2734 ntAPPRIS ALT2 BASIC14.2□□□□□ -0.14
BdnfP21237 Dnmt3b-210ENSMUST00000109774 4320 ntAPPRIS P4 TSL 1 (best) BASIC14.2□□□□□ -0.14
BdnfP21237 Gm13418-201ENSMUST00000119097 944 ntBASIC14.2□□□□□ -0.14
Retrieved 100 of 76,532 protein–RNA pairs in 50.7 ms