Protein–RNA interactions for Protein: P20040

H-2 class II histocompatibility antigen, E-Q beta chain, mousemouse

Predictions only

Length 264 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
P20040 Sod1-201ENSMUST00000023707 646 ntAPPRIS P1 TSL 1 (best) BASIC13.19□□□□□ -0.3
P20040 Thoc7-201ENSMUST00000065865 937 ntAPPRIS P1 TSL 1 (best) BASIC13.19□□□□□ -0.3
P20040 Tmem108-204ENSMUST00000189588 2850 ntAPPRIS P1 TSL 1 (best) BASIC13.19□□□□□ -0.3
P20040 Hdhd2-203ENSMUST00000097522 2318 ntAPPRIS P1 TSL 1 (best) BASIC13.19□□□□□ -0.3
P20040 Scube2-203ENSMUST00000106729 3563 ntAPPRIS P2 TSL 1 (best) BASIC13.19□□□□□ -0.3
P20040 Josd1-201ENSMUST00000023061 3394 ntAPPRIS P1 TSL 1 (best) BASIC13.19□□□□□ -0.3
P20040 Pard3-202ENSMUST00000079777 3394 ntTSL 5 BASIC13.19□□□□□ -0.3
P20040 E230016M11Rik-201ENSMUST00000130657 1764 ntTSL 1 (best) BASIC13.19□□□□□ -0.3
P20040 Crhbp-202ENSMUST00000221025 1779 ntAPPRIS P1 TSL 1 (best) BASIC13.19□□□□□ -0.3
P20040 Cyp2u1-201ENSMUST00000106337 4378 ntAPPRIS P1 TSL 1 (best) BASIC13.19□□□□□ -0.3
P20040 Rasal3-204ENSMUST00000135618 3293 ntAPPRIS ALT2 TSL 5 BASIC13.19□□□□□ -0.3
P20040 Ptpn6-202ENSMUST00000112484 2219 ntAPPRIS P3 TSL 1 (best) BASIC13.19□□□□□ -0.3
P20040 Kctd14-205ENSMUST00000206279 2203 ntAPPRIS ALT2 TSL 2 BASIC13.19□□□□□ -0.3
P20040 Lypd1-205ENSMUST00000162899 1511 ntTSL 1 (best) BASIC13.18□□□□□ -0.3
P20040 Prr15-201ENSMUST00000059138 1511 ntAPPRIS P1 TSL 1 (best) BASIC13.18□□□□□ -0.3
P20040 Nfasc-208ENSMUST00000188307 3049 ntTSL 1 (best) BASIC13.18□□□□□ -0.3
P20040 Riox2-201ENSMUST00000023407 2159 ntAPPRIS P1 TSL 1 (best) BASIC13.18□□□□□ -0.3
P20040 Hmgn1-201ENSMUST00000050884 2174 ntAPPRIS P1 TSL 1 (best) BASIC13.18□□□□□ -0.3
P20040 Brsk2-202ENSMUST00000075528 2160 ntTSL 1 (best) BASIC13.18□□□□□ -0.3
P20040 Ece2-201ENSMUST00000003898 3152 ntAPPRIS P3 TSL 1 (best) BASIC13.18□□□□□ -0.3
P20040 Mib2-201ENSMUST00000103176 3642 ntAPPRIS P1 TSL 1 (best) BASIC13.18□□□□□ -0.3
P20040 Tspan15-201ENSMUST00000047883 3638 ntAPPRIS P1 TSL 1 (best) BASIC13.18□□□□□ -0.3
P20040 Slc33a1-202ENSMUST00000160883 1978 ntAPPRIS P1 TSL 5 BASIC13.18□□□□□ -0.3
P20040 Myocd-202ENSMUST00000102635 4935 ntAPPRIS P3 TSL 1 (best) BASIC13.18□□□□□ -0.3
P20040 Cadps2-213ENSMUST00000166458 4598 ntAPPRIS ALT2 TSL 5 BASIC13.18□□□□□ -0.3
P20040 Jakmip1-212ENSMUST00000174629 1941 ntTSL 5 BASIC13.18□□□□□ -0.3
P20040 Gm15358-201ENSMUST00000119249 520 ntBASIC13.18□□□□□ -0.3
P20040 Hmgb1-208ENSMUST00000139443 923 ntTSL 2 BASIC13.18□□□□□ -0.3
P20040 Slc25a5-201ENSMUST00000016463 1240 ntAPPRIS P1 TSL 1 (best) BASIC13.18□□□□□ -0.3
P20040 Gm17114-201ENSMUST00000164716 511 ntTSL 3 BASIC13.18□□□□□ -0.3
P20040 1700039E22Rik-201ENSMUST00000174082 770 ntTSL 1 (best) BASIC13.18□□□□□ -0.3
P20040 Gm26695-201ENSMUST00000180920 1251 ntTSL 5 BASIC13.18□□□□□ -0.3
P20040 A830052D11Rik-201ENSMUST00000181729 1130 ntTSL 1 (best) BASIC13.18□□□□□ -0.3
P20040 Gm43514-201ENSMUST00000198852 424 ntBASIC13.18□□□□□ -0.3
P20040 Psmb4-201ENSMUST00000005923 1183 ntAPPRIS P1 TSL 1 (best) BASIC13.18□□□□□ -0.3
P20040 Rara-203ENSMUST00000107474 2380 ntAPPRIS P1 TSL 5 BASIC13.18□□□□□ -0.3
P20040 Cc2d1b-201ENSMUST00000030320 3303 ntAPPRIS P1 TSL 1 (best) BASIC13.18□□□□□ -0.3
P20040 Pid1-207ENSMUST00000177458 2521 ntTSL 2 BASIC13.18□□□□□ -0.3
P20040 Pdlim5-212ENSMUST00000200043 1581 ntAPPRIS ALT2 TSL 1 (best) BASIC13.18□□□□□ -0.3
P20040 Gm21451-201ENSMUST00000111062 2775 ntBASIC13.18□□□□□ -0.3
P20040 Cbarp-215ENSMUST00000170219 2941 ntAPPRIS P2 TSL 5 BASIC13.18□□□□□ -0.3
P20040 Rbm42-202ENSMUST00000108141 1526 ntAPPRIS ALT2 TSL 5 BASIC13.18□□□□□ -0.3
P20040 Gm4262-201ENSMUST00000180624 1986 ntTSL 1 (best) BASIC13.18□□□□□ -0.3
P20040 Nucb1-201ENSMUST00000033096 2111 ntAPPRIS ALT2 TSL 5 BASIC13.18□□□□□ -0.3
P20040 Nphp1-201ENSMUST00000028857 2260 ntAPPRIS P3 TSL 1 (best) BASIC13.18□□□□□ -0.3
P20040 Vash1-201ENSMUST00000021681 2599 ntAPPRIS P1 TSL 1 (best) BASIC13.18□□□□□ -0.3
P20040 Syn2-201ENSMUST00000009538 2708 ntAPPRIS P4 TSL 1 (best) BASIC13.18□□□□□ -0.3
P20040 Pxylp1-204ENSMUST00000120101 3189 ntAPPRIS P1 TSL 1 (best) BASIC13.18□□□□□ -0.3
P20040 Leng8-201ENSMUST00000037472 5105 ntAPPRIS P2 TSL 1 (best) BASIC13.18□□□□□ -0.3
P20040 Hps1-204ENSMUST00000160455 2952 ntAPPRIS ALT2 TSL 1 (best) BASIC13.17□□□□□ -0.3
P20040 Thumpd1-201ENSMUST00000033236 2689 ntAPPRIS P1 TSL 1 (best) BASIC13.17□□□□□ -0.3
P20040 Mbp-203ENSMUST00000075372 2075 ntAPPRIS ALT2 TSL 1 (best) BASIC13.17□□□□□ -0.3
P20040 Epb41l1-205ENSMUST00000109574 5904 ntTSL 1 (best) BASIC13.17□□□□□ -0.3
P20040 9330182L06Rik-201ENSMUST00000069538 4688 ntAPPRIS P2 TSL 1 (best) BASIC13.17□□□□□ -0.3
P20040 Hic2-202ENSMUST00000115698 2765 ntTSL 1 (best) BASIC13.17□□□□□ -0.3
P20040 Bmper-201ENSMUST00000071982 3791 ntAPPRIS P1 TSL 1 (best) BASIC13.17□□□□□ -0.3
P20040 AC131104.1-201ENSMUST00000222118 1739 ntTSL 5 BASIC13.17□□□□□ -0.3
P20040 Gm43509-201ENSMUST00000196551 2594 ntBASIC13.17□□□□□ -0.3
P20040 A230072C01Rik-202ENSMUST00000136447 1412 ntTSL 1 (best) BASIC13.17□□□□□ -0.3
P20040 Chtop-205ENSMUST00000107343 3118 ntTSL 1 (best) BASIC13.17□□□□□ -0.3
P20040 Gm15655-201ENSMUST00000134649 440 ntTSL 2 BASIC13.17□□□□□ -0.3
P20040 Flg-204ENSMUST00000178752 756 ntAPPRIS ALT2 BASIC13.17□□□□□ -0.3
P20040 Tmem270-202ENSMUST00000201316 847 ntAPPRIS P1 TSL 1 (best) BASIC13.17□□□□□ -0.3
P20040 AC159106.1-201ENSMUST00000224421 690 ntBASIC13.17□□□□□ -0.3
P20040 6030408B16Rik-201ENSMUST00000071328 1155 ntAPPRIS ALT2 TSL 5 BASIC13.17□□□□□ -0.3
P20040 Hectd1-202ENSMUST00000179265 9012 ntTSL 5 BASIC13.17□□□□□ -0.3
P20040 Txndc11-202ENSMUST00000118362 4248 ntTSL 1 (best) BASIC13.17□□□□□ -0.3
P20040 4930459C07Rik-202ENSMUST00000219638 1805 ntTSL 5 BASIC13.17□□□□□ -0.3
P20040 Ldlrap1-201ENSMUST00000037828 6549 ntAPPRIS P1 TSL 1 (best) BASIC13.17□□□□□ -0.3
P20040 Glyr1-202ENSMUST00000115844 3348 ntAPPRIS P1 TSL 1 (best) BASIC13.17□□□□□ -0.3
P20040 Glyr1-201ENSMUST00000023189 3330 ntTSL 1 (best) BASIC13.17□□□□□ -0.3
P20040 Slc22a15-207ENSMUST00000190824 3010 ntTSL 5 BASIC13.17□□□□□ -0.3
P20040 Dtx3-201ENSMUST00000038217 1944 ntAPPRIS P2 TSL 1 (best) BASIC13.17□□□□□ -0.3
P20040 Denr-201ENSMUST00000023869 2339 ntAPPRIS P1 TSL 1 (best) BASIC13.17□□□□□ -0.3
P20040 Abhd16b-201ENSMUST00000069649 1775 ntAPPRIS P1 BASIC13.17□□□□□ -0.3
P20040 Kcnf1-201ENSMUST00000170580 4789 ntAPPRIS P1 BASIC13.17□□□□□ -0.3
P20040 Txndc11-203ENSMUST00000118679 3523 ntTSL 1 (best) BASIC13.17□□□□□ -0.3
P20040 Ccbe1-202ENSMUST00000130300 1631 ntAPPRIS P1 TSL 1 (best) BASIC13.17□□□□□ -0.3
P20040 Dnajc9-201ENSMUST00000022345 1631 ntAPPRIS P1 TSL 1 (best) BASIC13.17□□□□□ -0.3
P20040 Ano7-201ENSMUST00000058682 2963 ntAPPRIS ALT2 TSL 1 (best) BASIC13.17□□□□□ -0.3
P20040 Iqcm-201ENSMUST00000034033 2014 ntAPPRIS P1 TSL 1 (best) BASIC13.17□□□□□ -0.3
P20040 Grik5-201ENSMUST00000003468 3763 ntAPPRIS P1 TSL 1 (best) BASIC13.17□□□□□ -0.3
P20040 Bet1l-201ENSMUST00000026557 2268 ntAPPRIS P1 TSL 1 (best) BASIC13.16□□□□□ -0.3
P20040 Midn-201ENSMUST00000042057 3727 ntAPPRIS P3 TSL 1 (best) BASIC13.16□□□□□ -0.3
P20040 4930481A15Rik-201ENSMUST00000128542 2106 ntTSL 1 (best) BASIC13.16□□□□□ -0.3
P20040 Myh14-201ENSMUST00000048102 6457 ntAPPRIS ALT2 TSL 1 (best) BASIC13.16□□□□□ -0.3
P20040 Smg9-201ENSMUST00000002280 2242 ntAPPRIS P1 TSL 1 (best) BASIC13.16□□□□□ -0.3
P20040 2410018L13Rik-205ENSMUST00000149246 3370 ntTSL 2 BASIC13.16□□□□□ -0.3
P20040 Psmc4-201ENSMUST00000032824 1440 ntAPPRIS P1 TSL 1 (best) BASIC13.16□□□□□ -0.3
P20040 AC154527.4-201ENSMUST00000224364 1667 ntBASIC13.16□□□□□ -0.3
P20040 Ftl2-ps-201ENSMUST00000118517 552 ntBASIC13.16□□□□□ -0.3
P20040 Gm6184-201ENSMUST00000120403 1261 ntBASIC13.16□□□□□ -0.3
P20040 Sssca1-203ENSMUST00000159693 705 ntTSL 3 BASIC13.16□□□□□ -0.3
P20040 Gm15590-201ENSMUST00000078419 552 ntBASIC13.16□□□□□ -0.3
P20040 Alx1-204ENSMUST00000217946 1542 ntTSL 5 BASIC13.16□□□□□ -0.3
P20040 Hpcal1-201ENSMUST00000071858 1526 ntAPPRIS P1 TSL 1 (best) BASIC13.16□□□□□ -0.3
P20040 Fbxl19-201ENSMUST00000033081 3410 ntAPPRIS P2 TSL 1 (best) BASIC13.16□□□□□ -0.3
P20040 Asf1b-201ENSMUST00000005607 1788 ntAPPRIS P1 TSL 1 (best) BASIC13.16□□□□□ -0.3
P20040 Irf8-205ENSMUST00000162001 2270 ntAPPRIS P1 TSL 1 (best) BASIC13.16□□□□□ -0.3
P20040 Tspan11-201ENSMUST00000032501 5188 ntAPPRIS P1 TSL 1 (best) BASIC13.16□□□□□ -0.3
Retrieved 100 of 76,532 protein–RNA pairs in 42.5 ms