Protein–RNA interactions for Protein: P16388

Kcna1, Potassium voltage-gated channel subfamily A member 1, mousemouse

Predictions only

Length 495 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Kcna1P16388 Polr2i-202ENSMUST00000108192 508 ntTSL 2 BASIC16.8■□□□□ 0.28
Kcna1P16388 Hpca-207ENSMUST00000139450 812 ntAPPRIS P1 TSL 3 BASIC16.8■□□□□ 0.28
Kcna1P16388 Gm6297-201ENSMUST00000181475 2146 ntTSL 1 (best) BASIC16.8■□□□□ 0.28
Kcna1P16388 Gm4691-201ENSMUST00000182339 1000 ntBASIC16.8■□□□□ 0.28
Kcna1P16388 Gm2451-201ENSMUST00000199447 999 ntBASIC16.8■□□□□ 0.28
Kcna1P16388 Gm10290-201ENSMUST00000200451 999 ntBASIC16.8■□□□□ 0.28
Kcna1P16388 Cd3g-201ENSMUST00000002101 1023 ntAPPRIS P1 TSL 1 (best) BASIC16.8■□□□□ 0.28
Kcna1P16388 Elof1-203ENSMUST00000213233 810 ntAPPRIS P1 TSL 3 BASIC16.8■□□□□ 0.28
Kcna1P16388 Fech-201ENSMUST00000025484 2901 ntAPPRIS P1 TSL 1 (best) BASIC16.8■□□□□ 0.28
Kcna1P16388 Ccdc88b-201ENSMUST00000113440 4959 ntAPPRIS P1 TSL 1 (best) BASIC16.8■□□□□ 0.28
Kcna1P16388 Mtmr7-202ENSMUST00000048898 2488 ntAPPRIS P1 TSL 1 (best) BASIC16.8■□□□□ 0.28
Kcna1P16388 Trappc2-203ENSMUST00000116495 1613 ntAPPRIS P1 TSL 1 (best) BASIC16.8■□□□□ 0.28
Kcna1P16388 Whrn-207ENSMUST00000107393 4028 ntAPPRIS ALT2 TSL 1 (best) BASIC16.8■□□□□ 0.28
Kcna1P16388 Whrn-203ENSMUST00000084510 4049 ntAPPRIS P4 TSL 1 (best) BASIC16.8■□□□□ 0.28
Kcna1P16388 Htr7-205ENSMUST00000166074 3079 ntTSL 5 BASIC16.8■□□□□ 0.28
Kcna1P16388 Rad18-201ENSMUST00000068487 2577 ntAPPRIS ALT2 TSL 1 (best) BASIC16.8■□□□□ 0.28
Kcna1P16388 Traf7-210ENSMUST00000176353 2503 ntTSL 1 (best) BASIC16.79■□□□□ 0.28
Kcna1P16388 Psmd4-203ENSMUST00000117355 1756 ntAPPRIS ALT2 TSL 1 (best) BASIC16.79■□□□□ 0.28
Kcna1P16388 Nabp1-201ENSMUST00000027279 2838 ntAPPRIS P1 TSL 1 (best) BASIC16.79■□□□□ 0.28
Kcna1P16388 Pld5-202ENSMUST00000111166 1370 ntTSL 1 (best) BASIC16.79■□□□□ 0.28
Kcna1P16388 Fbxo25-201ENSMUST00000043520 2012 ntAPPRIS P3 TSL 1 (best) BASIC16.79■□□□□ 0.28
Kcna1P16388 Zfp57-202ENSMUST00000089968 1991 ntAPPRIS ALT2 TSL 1 (best) BASIC16.79■□□□□ 0.28
Kcna1P16388 Dpm3-202ENSMUST00000107462 827 ntAPPRIS P1 TSL 3 BASIC16.79■□□□□ 0.28
Kcna1P16388 Gm11543-201ENSMUST00000120758 370 ntBASIC16.79■□□□□ 0.28
Kcna1P16388 Serpinf1-202ENSMUST00000125982 605 ntTSL 1 (best) BASIC16.79■□□□□ 0.28
Kcna1P16388 Cmc2-202ENSMUST00000128304 394 ntTSL 5 BASIC16.79■□□□□ 0.28
Kcna1P16388 Gm15706-201ENSMUST00000139612 899 ntTSL 2 BASIC16.79■□□□□ 0.28
Kcna1P16388 Gm5479-201ENSMUST00000160578 435 ntBASIC16.79■□□□□ 0.28
Kcna1P16388 Runx2os2-201ENSMUST00000161664 818 ntTSL 1 (best) BASIC16.79■□□□□ 0.28
Kcna1P16388 Gm5312-201ENSMUST00000203728 547 ntBASIC16.79■□□□□ 0.28
Kcna1P16388 Pomc-201ENSMUST00000020990 1031 ntAPPRIS P1 TSL 1 (best) BASIC16.79■□□□□ 0.28
Kcna1P16388 Snrnp25-201ENSMUST00000039601 821 ntAPPRIS P2 TSL 1 (best) BASIC16.79■□□□□ 0.28
Kcna1P16388 Tsc22d3-203ENSMUST00000112996 1552 ntTSL 1 (best) BASIC16.79■□□□□ 0.28
Kcna1P16388 Mdm1-202ENSMUST00000163238 2461 ntAPPRIS ALT2 TSL 1 (best) BASIC16.79■□□□□ 0.28
Kcna1P16388 Prdm4-201ENSMUST00000037646 3877 ntAPPRIS P1 TSL 1 (best) BASIC16.79■□□□□ 0.28
Kcna1P16388 Tpm2-202ENSMUST00000107913 2098 ntAPPRIS P3 TSL 1 (best) BASIC16.79■□□□□ 0.28
Kcna1P16388 Tbp-202ENSMUST00000117593 2067 ntAPPRIS P1 TSL 1 (best) BASIC16.79■□□□□ 0.28
Kcna1P16388 Plppr2-202ENSMUST00000188468 1480 ntAPPRIS ALT2 TSL 5 BASIC16.79■□□□□ 0.28
Kcna1P16388 Lsm12-202ENSMUST00000107156 2015 ntTSL 5 BASIC16.79■□□□□ 0.28
Kcna1P16388 Arhgef1-218ENSMUST00000206508 3195 ntAPPRIS ALT2 TSL 1 (best) BASIC16.79■□□□□ 0.28
Kcna1P16388 Zfx-204ENSMUST00000113927 6933 ntAPPRIS P1 TSL 5 BASIC16.79■□□□□ 0.28
Kcna1P16388 Gm9768-201ENSMUST00000206007 2861 ntBASIC16.79■□□□□ 0.28
Kcna1P16388 Fam172a-203ENSMUST00000163257 1436 ntAPPRIS P4 TSL 5 BASIC16.79■□□□□ 0.28
Kcna1P16388 Slk-202ENSMUST00000051691 4239 ntAPPRIS P3 TSL 1 (best) BASIC16.78■□□□□ 0.28
Kcna1P16388 Syt6-201ENSMUST00000090697 4416 ntAPPRIS P1 TSL 5 BASIC16.78■□□□□ 0.28
Kcna1P16388 Gata1-201ENSMUST00000033502 1902 ntAPPRIS P1 TSL 1 (best) BASIC16.78■□□□□ 0.28
Kcna1P16388 Slmap-203ENSMUST00000102956 5476 ntAPPRIS P3 TSL 5 BASIC16.78■□□□□ 0.28
Kcna1P16388 Ceacam16-201ENSMUST00000014830 1635 ntAPPRIS P1 TSL 1 (best) BASIC16.78■□□□□ 0.28
Kcna1P16388 BC026585-201ENSMUST00000046743 1618 ntAPPRIS P1 TSL 1 (best) BASIC16.78■□□□□ 0.28
Kcna1P16388 Bcs1l-201ENSMUST00000027358 1890 ntAPPRIS P1 TSL 1 (best) BASIC16.78■□□□□ 0.28
Kcna1P16388 Slc30a5-201ENSMUST00000067246 3179 ntAPPRIS P2 TSL 1 (best) BASIC16.78■□□□□ 0.28
Kcna1P16388 Arf1-201ENSMUST00000061242 1800 ntAPPRIS P1 TSL 1 (best) BASIC16.78■□□□□ 0.28
Kcna1P16388 Impdh1-205ENSMUST00000160878 2314 ntTSL 5 BASIC16.78■□□□□ 0.28
Kcna1P16388 Hist1h3e-201ENSMUST00000105107 836 ntAPPRIS P1 BASIC16.78■□□□□ 0.28
Kcna1P16388 Zfp688-201ENSMUST00000106300 1015 ntAPPRIS P1 TSL 2 BASIC16.78■□□□□ 0.28
Kcna1P16388 Tmsb10-203ENSMUST00000114050 570 ntAPPRIS P1 TSL 1 (best) BASIC16.78■□□□□ 0.28
Kcna1P16388 2810408I11Rik-202ENSMUST00000150749 711 ntTSL 1 (best) BASIC16.78■□□□□ 0.28
Kcna1P16388 Senp1-204ENSMUST00000180657 3806 ntAPPRIS ALT2 TSL 1 (best) BASIC16.78■□□□□ 0.28
Kcna1P16388 Rps10-201ENSMUST00000025052 519 ntTSL 1 (best) BASIC16.78■□□□□ 0.28
Kcna1P16388 Krtap9-3-201ENSMUST00000062683 759 ntAPPRIS P1 BASIC16.78■□□□□ 0.28
Kcna1P16388 Pdlim4-202ENSMUST00000093109 962 ntTSL 5 BASIC16.78■□□□□ 0.28
Kcna1P16388 Rnf139-201ENSMUST00000036904 4348 ntAPPRIS P1 TSL 1 (best) BASIC16.78■□□□□ 0.28
Kcna1P16388 Irf8-205ENSMUST00000162001 2270 ntAPPRIS P1 TSL 1 (best) BASIC16.78■□□□□ 0.28
Kcna1P16388 Cadps2-204ENSMUST00000115356 3533 ntTSL 1 (best) BASIC16.78■□□□□ 0.28
Kcna1P16388 Dnm1l-201ENSMUST00000023477 4017 ntAPPRIS P1 TSL 1 (best) BASIC16.78■□□□□ 0.28
Kcna1P16388 Traf3ip1-201ENSMUST00000047242 3474 ntAPPRIS P2 TSL 1 (best) BASIC16.78■□□□□ 0.28
Kcna1P16388 Nup62-205ENSMUST00000208626 2708 ntAPPRIS P1 TSL 5 BASIC16.78■□□□□ 0.28
Kcna1P16388 Nup62-201ENSMUST00000057195 2722 ntAPPRIS P1 TSL 1 (best) BASIC16.78■□□□□ 0.28
Kcna1P16388 Gm26534-201ENSMUST00000181687 1724 ntTSL 1 (best) BASIC16.78■□□□□ 0.28
Kcna1P16388 Zfp277-202ENSMUST00000069692 2438 ntAPPRIS ALT2 TSL 1 (best) BASIC16.78■□□□□ 0.28
Kcna1P16388 Nab1-205ENSMUST00000186764 3640 ntAPPRIS ALT1 TSL 5 BASIC16.78■□□□□ 0.28
Kcna1P16388 Bcor-204ENSMUST00000115513 6941 ntAPPRIS ALT2 TSL 1 (best) BASIC16.78■□□□□ 0.28
Kcna1P16388 Gm39244-202ENSMUST00000210837 1857 ntTSL 5 BASIC16.78■□□□□ 0.28
Kcna1P16388 Erlec1-201ENSMUST00000073192 2532 ntAPPRIS P1 TSL 1 (best) BASIC16.77■□□□□ 0.28
Kcna1P16388 Dffa-202ENSMUST00000103216 1835 ntTSL 1 (best) BASIC16.77■□□□□ 0.28
Kcna1P16388 Gm10605-202ENSMUST00000183019 3198 ntBASIC16.77■□□□□ 0.28
Kcna1P16388 Ube2d3-212ENSMUST00000197859 3833 ntAPPRIS P2 TSL 1 (best) BASIC16.77■□□□□ 0.28
Kcna1P16388 Tex19.2-201ENSMUST00000039146 2046 ntAPPRIS P1 TSL 1 (best) BASIC16.77■□□□□ 0.28
Kcna1P16388 Psmc5-201ENSMUST00000021049 1316 ntAPPRIS P1 TSL 1 (best) BASIC16.77■□□□□ 0.28
Kcna1P16388 Rflnb-201ENSMUST00000021207 3512 ntAPPRIS P1 TSL 1 (best) BASIC16.77■□□□□ 0.28
Kcna1P16388 Sumo3-201ENSMUST00000020501 2630 ntAPPRIS P3 TSL 1 (best) BASIC16.77■□□□□ 0.28
Kcna1P16388 Lrrc56-201ENSMUST00000047093 2197 ntAPPRIS P3 TSL 1 (best) BASIC16.77■□□□□ 0.28
Kcna1P16388 Trappc12-203ENSMUST00000170994 2818 ntTSL 1 (best) BASIC16.77■□□□□ 0.28
Kcna1P16388 Klhl42-201ENSMUST00000036003 6267 ntAPPRIS P1 TSL 1 (best) BASIC16.77■□□□□ 0.28
Kcna1P16388 Mvk-206ENSMUST00000137167 1049 ntTSL 2 BASIC16.77■□□□□ 0.28
Kcna1P16388 Gm11682-201ENSMUST00000144689 516 ntTSL 3 BASIC16.77■□□□□ 0.28
Kcna1P16388 Nckipsd-206ENSMUST00000195323 467 ntTSL 3 BASIC16.77■□□□□ 0.28
Kcna1P16388 Ccna2-201ENSMUST00000029270 2965 ntAPPRIS P1 TSL 1 (best) BASIC16.77■□□□□ 0.28
Kcna1P16388 Smim8-201ENSMUST00000029972 786 ntAPPRIS P1 TSL 1 (best) BASIC16.77■□□□□ 0.28
Kcna1P16388 1700018B24Rik-201ENSMUST00000036023 593 ntTSL 1 (best) BASIC16.77■□□□□ 0.28
Kcna1P16388 Tmod4-201ENSMUST00000005769 1242 ntAPPRIS P1 TSL 1 (best) BASIC16.77■□□□□ 0.28
Kcna1P16388 Atad3aos-201ENSMUST00000067628 971 ntTSL 1 (best) BASIC16.77■□□□□ 0.28
Kcna1P16388 G430095P16Rik-201ENSMUST00000098571 721 ntAPPRIS P1 TSL 1 (best) BASIC16.77■□□□□ 0.28
Kcna1P16388 Zmynd11-207ENSMUST00000110638 4003 ntTSL 5 BASIC16.77■□□□□ 0.28
Kcna1P16388 Daxx-208ENSMUST00000174541 2325 ntAPPRIS ALT2 TSL 5 BASIC16.77■□□□□ 0.28
Kcna1P16388 Catip-204ENSMUST00000191010 1866 ntAPPRIS ALT2 TSL 1 (best) BASIC16.77■□□□□ 0.27
Kcna1P16388 Mettl2-201ENSMUST00000021030 1867 ntAPPRIS P1 TSL 1 (best) BASIC16.77■□□□□ 0.27
Kcna1P16388 Magi1-201ENSMUST00000055224 7007 ntTSL 1 (best) BASIC16.77■□□□□ 0.27
Kcna1P16388 Aldh16a1-201ENSMUST00000107815 2685 ntTSL 1 (best) BASIC16.77■□□□□ 0.27
Kcna1P16388 Ralgds-203ENSMUST00000113893 3683 ntAPPRIS ALT2 TSL 1 (best) BASIC16.77■□□□□ 0.27
Retrieved 100 of 76,532 protein–RNA pairs in 42.6 ms