Protein–RNA interactions for Protein: P06798

Hoxa4, Homeobox protein Hox-A4, mousemouse

Predictions only

Length 285 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Hoxa4P06798 Gm25349-201ENSMUST00000177728 110 ntBASIC14.57□□□□□ -0.08
Hoxa4P06798 Gm23616-201ENSMUST00000177797 110 ntBASIC14.57□□□□□ -0.08
Hoxa4P06798 Gm25871-201ENSMUST00000177816 110 ntBASIC14.57□□□□□ -0.08
Hoxa4P06798 Gm24752-201ENSMUST00000178240 110 ntBASIC14.57□□□□□ -0.08
Hoxa4P06798 Gm24496-201ENSMUST00000178287 110 ntBASIC14.57□□□□□ -0.08
Hoxa4P06798 Gm25649-201ENSMUST00000178476 110 ntBASIC14.57□□□□□ -0.08
Hoxa4P06798 Gm25548-201ENSMUST00000178681 110 ntBASIC14.57□□□□□ -0.08
Hoxa4P06798 Gm23147-201ENSMUST00000178841 110 ntBASIC14.57□□□□□ -0.08
Hoxa4P06798 Gm26095-201ENSMUST00000179270 110 ntBASIC14.57□□□□□ -0.08
Hoxa4P06798 Gm22171-201ENSMUST00000179283 110 ntBASIC14.57□□□□□ -0.08
Hoxa4P06798 Gm23936-201ENSMUST00000179354 110 ntBASIC14.57□□□□□ -0.08
Hoxa4P06798 Gm22619-201ENSMUST00000179516 110 ntBASIC14.57□□□□□ -0.08
Hoxa4P06798 Gm25255-201ENSMUST00000179579 110 ntBASIC14.57□□□□□ -0.08
Hoxa4P06798 Gm24755-201ENSMUST00000179691 110 ntBASIC14.57□□□□□ -0.08
Hoxa4P06798 Gm26506-201ENSMUST00000179692 110 ntBASIC14.57□□□□□ -0.08
Hoxa4P06798 Gm25086-201ENSMUST00000179931 110 ntBASIC14.57□□□□□ -0.08
Hoxa4P06798 Gm23243-201ENSMUST00000180047 110 ntBASIC14.57□□□□□ -0.08
Hoxa4P06798 Gm24659-201ENSMUST00000180212 110 ntBASIC14.57□□□□□ -0.08
Hoxa4P06798 Gm24169-201ENSMUST00000180244 110 ntBASIC14.57□□□□□ -0.08
Hoxa4P06798 Gm23689-201ENSMUST00000180354 110 ntBASIC14.57□□□□□ -0.08
Hoxa4P06798 Gm27359-201ENSMUST00000184153 110 ntBASIC14.57□□□□□ -0.08
Hoxa4P06798 Gm27785-201ENSMUST00000184268 110 ntBASIC14.57□□□□□ -0.08
Hoxa4P06798 Gm27466-201ENSMUST00000184396 110 ntBASIC14.57□□□□□ -0.08
Hoxa4P06798 Gm27703-201ENSMUST00000184836 110 ntBASIC14.57□□□□□ -0.08
Hoxa4P06798 Ndufaf8-202ENSMUST00000185558 427 ntTSL 5 BASIC14.57□□□□□ -0.08
Hoxa4P06798 Gm43474-201ENSMUST00000196415 774 ntBASIC14.57□□□□□ -0.08
Hoxa4P06798 9230114J08Rik-201ENSMUST00000200375 350 ntTSL 1 (best) BASIC14.57□□□□□ -0.08
Hoxa4P06798 Gm43125-201ENSMUST00000201724 730 ntBASIC14.57□□□□□ -0.08
Hoxa4P06798 Erich4-201ENSMUST00000098663 911 ntAPPRIS P1 TSL 1 (best) BASIC14.57□□□□□ -0.08
Hoxa4P06798 Dmkn-204ENSMUST00000085691 2007 ntAPPRIS P4 TSL 1 (best) BASIC14.57□□□□□ -0.08
Hoxa4P06798 Mllt1-201ENSMUST00000025053 3608 ntAPPRIS P1 TSL 1 (best) BASIC14.57□□□□□ -0.08
Hoxa4P06798 Gm6297-201ENSMUST00000181475 2146 ntTSL 1 (best) BASIC14.57□□□□□ -0.08
Hoxa4P06798 Ggn-205ENSMUST00000209019 2148 ntAPPRIS ALT2 TSL 1 (best) BASIC14.57□□□□□ -0.08
Hoxa4P06798 Vdac3-201ENSMUST00000009036 1354 ntAPPRIS P2 TSL 1 (best) BASIC14.57□□□□□ -0.08
Hoxa4P06798 Ankrd17-202ENSMUST00000081914 8057 ntAPPRIS ALT2 TSL 5 BASIC14.57□□□□□ -0.08
Hoxa4P06798 Pcdha7-201ENSMUST00000192631 5337 ntAPPRIS P1 TSL 1 (best) BASIC14.57□□□□□ -0.08
Hoxa4P06798 2810408A11Rik-202ENSMUST00000100969 1437 ntAPPRIS ALT2 TSL 1 (best) BASIC14.57□□□□□ -0.08
Hoxa4P06798 Tigd5-201ENSMUST00000192937 4801 ntAPPRIS P1 BASIC14.57□□□□□ -0.08
Hoxa4P06798 CT025626.1-201ENSMUST00000223735 1455 ntBASIC14.57□□□□□ -0.08
Hoxa4P06798 Nkx3-1-201ENSMUST00000022646 3195 ntAPPRIS P1 TSL 1 (best) BASIC14.57□□□□□ -0.08
Hoxa4P06798 Pom121l2-202ENSMUST00000117882 1943 ntAPPRIS ALT2 TSL 1 (best) BASIC14.56□□□□□ -0.08
Hoxa4P06798 Mapk8ip1-202ENSMUST00000111279 3274 ntAPPRIS ALT2 TSL 1 (best) BASIC14.56□□□□□ -0.08
Hoxa4P06798 Ube2l6-201ENSMUST00000102642 1560 ntAPPRIS P1 TSL 1 (best) BASIC14.56□□□□□ -0.08
Hoxa4P06798 Iqcm-201ENSMUST00000034033 2014 ntAPPRIS P1 TSL 1 (best) BASIC14.56□□□□□ -0.08
Hoxa4P06798 Gpsm1-202ENSMUST00000066936 3384 ntAPPRIS P3 TSL 1 (best) BASIC14.56□□□□□ -0.08
Hoxa4P06798 Spcs2-210ENSMUST00000209032 1610 ntTSL 5 BASIC14.56□□□□□ -0.08
Hoxa4P06798 Adam9-204ENSMUST00000208247 4044 ntAPPRIS P2 TSL 1 (best) BASIC14.56□□□□□ -0.08
Hoxa4P06798 Ugcg-201ENSMUST00000030074 4012 ntAPPRIS P1 TSL 1 (best) BASIC14.56□□□□□ -0.08
Hoxa4P06798 Pdia2-202ENSMUST00000120333 1661 ntAPPRIS ALT2 TSL 1 (best) BASIC14.56□□□□□ -0.08
Hoxa4P06798 4930556H04Rik-201ENSMUST00000222451 1675 ntBASIC14.56□□□□□ -0.08
Hoxa4P06798 Lrrc56-201ENSMUST00000047093 2197 ntAPPRIS P3 TSL 1 (best) BASIC14.56□□□□□ -0.08
Hoxa4P06798 Med25-210ENSMUST00000208253 3693 ntAPPRIS P1 TSL 1 (best) BASIC14.56□□□□□ -0.08
Hoxa4P06798 Rgs6-203ENSMUST00000185665 2201 ntAPPRIS P4 TSL 5 BASIC14.56□□□□□ -0.08
Hoxa4P06798 Mid2-202ENSMUST00000112990 6271 ntAPPRIS P1 TSL 5 BASIC14.56□□□□□ -0.08
Hoxa4P06798 2810408I11Rik-202ENSMUST00000150749 711 ntTSL 1 (best) BASIC14.56□□□□□ -0.08
Hoxa4P06798 2810047C21Rik1-201ENSMUST00000172930 915 ntBASIC14.56□□□□□ -0.08
Hoxa4P06798 Cdk2ap2-204ENSMUST00000174514 669 ntTSL 2 BASIC14.56□□□□□ -0.08
Hoxa4P06798 Ighv1-15-201ENSMUST00000192077 351 ntAPPRIS P1 BASIC14.56□□□□□ -0.08
Hoxa4P06798 Gm42560-201ENSMUST00000201216 1023 ntTSL 1 (best) BASIC14.56□□□□□ -0.08
Hoxa4P06798 Gm5312-201ENSMUST00000203728 547 ntBASIC14.56□□□□□ -0.08
Hoxa4P06798 Cdipt-205ENSMUST00000206450 951 ntTSL 5 BASIC14.56□□□□□ -0.08
Hoxa4P06798 5830408C22Rik-201ENSMUST00000210072 1115 ntTSL 5 BASIC14.56□□□□□ -0.08
Hoxa4P06798 1700128F08Rik-202ENSMUST00000213708 717 ntBASIC14.56□□□□□ -0.08
Hoxa4P06798 AC140397.2-201ENSMUST00000224213 834 ntBASIC14.56□□□□□ -0.08
Hoxa4P06798 Rnf138rt1-201ENSMUST00000059320 1191 ntAPPRIS P1 BASIC14.56□□□□□ -0.08
Hoxa4P06798 Fgfr1op2-204ENSMUST00000111663 2880 ntTSL 1 (best) BASIC14.56□□□□□ -0.08
Hoxa4P06798 Gm45546-201ENSMUST00000211053 2394 ntBASIC14.56□□□□□ -0.08
Hoxa4P06798 Gm42466-201ENSMUST00000202099 1301 ntBASIC14.56□□□□□ -0.08
Hoxa4P06798 Pdk1-201ENSMUST00000006669 5185 ntAPPRIS P1 TSL 1 (best) BASIC14.56□□□□□ -0.08
Hoxa4P06798 Gm34016-201ENSMUST00000222678 1384 ntTSL 1 (best) BASIC14.56□□□□□ -0.08
Hoxa4P06798 Repin1-202ENSMUST00000118229 3138 ntAPPRIS ALT2 TSL 1 (best) BASIC14.56□□□□□ -0.08
Hoxa4P06798 Akt2-ps-201ENSMUST00000120718 1449 ntBASIC14.56□□□□□ -0.08
Hoxa4P06798 Rbm7-202ENSMUST00000213276 2629 ntTSL 2 BASIC14.56□□□□□ -0.08
Hoxa4P06798 Ripor2-205ENSMUST00000110384 5608 ntAPPRIS ALT2 TSL 1 (best) BASIC14.56□□□□□ -0.08
Hoxa4P06798 Mbp-204ENSMUST00000080658 2063 ntTSL 1 (best) BASIC14.56□□□□□ -0.08
Hoxa4P06798 Hnrnpr-202ENSMUST00000105850 2683 ntAPPRIS P1 TSL 1 (best) BASIC14.56□□□□□ -0.08
Hoxa4P06798 Cux2-201ENSMUST00000086317 5113 ntAPPRIS P1 TSL 1 (best) BASIC14.56□□□□□ -0.08
Hoxa4P06798 Eif4a3-201ENSMUST00000026667 1509 ntAPPRIS P1 TSL 1 (best) BASIC14.56□□□□□ -0.08
Hoxa4P06798 AC154412.1-201ENSMUST00000226540 2786 ntBASIC14.56□□□□□ -0.08
Hoxa4P06798 Farp2-202ENSMUST00000122402 2816 ntTSL 1 (best) BASIC14.56□□□□□ -0.08
Hoxa4P06798 Nup88-202ENSMUST00000108530 2389 ntAPPRIS P1 TSL 1 (best) BASIC14.55□□□□□ -0.08
Hoxa4P06798 A430034D21Rik-201ENSMUST00000194339 1802 ntTSL 1 (best) BASIC14.55□□□□□ -0.08
Hoxa4P06798 Casp8-201ENSMUST00000027189 2585 ntAPPRIS P3 TSL 1 (best) BASIC14.55□□□□□ -0.08
Hoxa4P06798 1700012B07Rik-202ENSMUST00000106674 2035 ntAPPRIS P4 TSL 1 (best) BASIC14.55□□□□□ -0.08
Hoxa4P06798 Romo1-203ENSMUST00000109598 362 ntAPPRIS P1 TSL 5 BASIC14.55□□□□□ -0.08
Hoxa4P06798 Stra8-202ENSMUST00000114997 1207 ntAPPRIS ALT2 TSL 1 (best) BASIC14.55□□□□□ -0.08
Hoxa4P06798 Nfya-203ENSMUST00000159063 1255 ntTSL 1 (best) BASIC14.55□□□□□ -0.08
Hoxa4P06798 Rps10-201ENSMUST00000025052 519 ntTSL 1 (best) BASIC14.55□□□□□ -0.08
Hoxa4P06798 Caly-201ENSMUST00000026541 1220 ntAPPRIS P1 TSL 1 (best) BASIC14.55□□□□□ -0.08
Hoxa4P06798 Tssk3-201ENSMUST00000000421 1280 ntAPPRIS P1 TSL 1 (best) BASIC14.55□□□□□ -0.08
Hoxa4P06798 Tmod4-201ENSMUST00000005769 1242 ntAPPRIS P1 TSL 1 (best) BASIC14.55□□□□□ -0.08
Hoxa4P06798 Paxbp1-202ENSMUST00000118522 3973 ntAPPRIS P1 TSL 1 (best) BASIC14.55□□□□□ -0.08
Hoxa4P06798 Psmc5-201ENSMUST00000021049 1316 ntAPPRIS P1 TSL 1 (best) BASIC14.55□□□□□ -0.08
Hoxa4P06798 Camkv-201ENSMUST00000035700 3277 ntAPPRIS P1 TSL 1 (best) BASIC14.55□□□□□ -0.08
Hoxa4P06798 Rab3a-204ENSMUST00000110093 1442 ntAPPRIS P1 TSL 1 (best) BASIC14.55□□□□□ -0.08
Hoxa4P06798 Gm17619-201ENSMUST00000180625 1449 ntTSL 1 (best) BASIC14.55□□□□□ -0.08
Hoxa4P06798 Emp2-201ENSMUST00000078357 3440 ntAPPRIS P1 TSL 1 (best) BASIC14.55□□□□□ -0.08
Hoxa4P06798 Prelid1-201ENSMUST00000021942 2644 ntAPPRIS P1 TSL 1 (best) BASIC14.55□□□□□ -0.08
Hoxa4P06798 Dnase1l2-202ENSMUST00000119932 1629 ntAPPRIS P1 TSL 1 (best) BASIC14.55□□□□□ -0.08
Hoxa4P06798 Wapl-201ENSMUST00000048263 6351 ntAPPRIS P3 TSL 1 (best) BASIC14.55□□□□□ -0.08
Retrieved 100 of 76,532 protein–RNA pairs in 42.1 ms