Protein–RNA interactions for Protein: P01643

Ig kappa chain V-V region MOPC 173, mousemouse

Predictions only

Length 108 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
P01643 Gm45351-201ENSMUST00000210683 2545 ntTSL 1 (best) BASIC11.76□□□□□ -0.53
P01643 H60b-201ENSMUST00000105522 1029 ntAPPRIS P1 TSL 1 (best) BASIC11.76□□□□□ -0.53
P01643 Gm8410-201ENSMUST00000117225 605 ntBASIC11.76□□□□□ -0.53
P01643 Gm13015-201ENSMUST00000118674 204 ntBASIC11.76□□□□□ -0.53
P01643 Gm17399-201ENSMUST00000181824 1181 ntTSL 1 (best) BASIC11.76□□□□□ -0.53
P01643 Gm37277-201ENSMUST00000194052 1111 ntBASIC11.76□□□□□ -0.53
P01643 Smim8-201ENSMUST00000029972 786 ntAPPRIS P1 TSL 1 (best) BASIC11.76□□□□□ -0.53
P01643 Tmem38a-201ENSMUST00000034244 2124 ntAPPRIS P1 TSL 1 (best) BASIC11.76□□□□□ -0.53
P01643 Rps27l-201ENSMUST00000040917 499 ntAPPRIS P1 TSL 1 (best) BASIC11.76□□□□□ -0.53
P01643 Rasgef1c-202ENSMUST00000093141 2120 ntTSL 1 (best) BASIC11.76□□□□□ -0.53
P01643 Mdga1-208ENSMUST00000171691 8339 ntAPPRIS ALT2 TSL 5 BASIC11.76□□□□□ -0.53
P01643 Papd4-205ENSMUST00000225868 3081 ntAPPRIS ALT1 BASIC11.76□□□□□ -0.53
P01643 AC159621.2-201ENSMUST00000223519 1326 ntBASIC11.76□□□□□ -0.53
P01643 Slc8b1-202ENSMUST00000076051 2661 ntTSL 1 (best) BASIC11.76□□□□□ -0.53
P01643 Rarb-201ENSMUST00000063750 3108 ntAPPRIS P1 TSL 1 (best) BASIC11.76□□□□□ -0.53
P01643 Cask-203ENSMUST00000115436 8260 ntAPPRIS P1 TSL 2 BASIC11.76□□□□□ -0.53
P01643 Parm1-201ENSMUST00000040576 5068 ntAPPRIS P1 TSL 1 (best) BASIC11.76□□□□□ -0.53
P01643 Gm43195-201ENSMUST00000200614 2332 ntBASIC11.76□□□□□ -0.53
P01643 Cobl-201ENSMUST00000046755 5615 ntAPPRIS P3 TSL 1 (best) BASIC11.76□□□□□ -0.53
P01643 Mvp-202ENSMUST00000165096 2837 ntAPPRIS P1 TSL 1 (best) BASIC11.76□□□□□ -0.53
P01643 Tor1aip2-205ENSMUST00000111757 6118 ntAPPRIS P1 TSL 1 (best) BASIC11.76□□□□□ -0.53
P01643 Ube2o-201ENSMUST00000082152 5205 ntAPPRIS P1 TSL 1 (best) BASIC11.76□□□□□ -0.53
P01643 Wnk1-202ENSMUST00000060043 10575 ntAPPRIS P3 TSL 1 (best) BASIC11.76□□□□□ -0.53
P01643 Spsb3-201ENSMUST00000024976 1947 ntAPPRIS P3 TSL 1 (best) BASIC11.76□□□□□ -0.53
P01643 Nyap1-201ENSMUST00000061789 3912 ntAPPRIS P3 TSL 5 BASIC11.76□□□□□ -0.53
P01643 Stra8-203ENSMUST00000114999 1455 ntAPPRIS P2 TSL 1 (best) BASIC11.76□□□□□ -0.53
P01643 Gm11839-201ENSMUST00000120647 1953 ntBASIC11.76□□□□□ -0.53
P01643 Chst8-204ENSMUST00000205259 1980 ntAPPRIS P1 TSL 5 BASIC11.76□□□□□ -0.53
P01643 Six4-201ENSMUST00000043208 6402 ntAPPRIS P2 TSL 1 (best) BASIC11.76□□□□□ -0.53
P01643 Fgf13-201ENSMUST00000033473 2499 ntAPPRIS P1 TSL 1 (best) BASIC11.76□□□□□ -0.53
P01643 Tdg-ps-201ENSMUST00000051363 2968 ntBASIC11.76□□□□□ -0.53
P01643 Pus1-207ENSMUST00000170468 1510 ntAPPRIS ALT2 TSL 5 BASIC11.76□□□□□ -0.53
P01643 Cndp2-202ENSMUST00000168419 2088 ntAPPRIS P1 TSL 1 (best) BASIC11.75□□□□□ -0.53
P01643 Gm26688-201ENSMUST00000181176 1568 ntTSL 1 (best) BASIC11.75□□□□□ -0.53
P01643 Spryd4-201ENSMUST00000061995 1583 ntAPPRIS P1 TSL 1 (best) BASIC11.75□□□□□ -0.53
P01643 Syk-203ENSMUST00000120135 5363 ntAPPRIS P2 TSL 1 (best) BASIC11.75□□□□□ -0.53
P01643 Tmtc4-201ENSMUST00000037726 3416 ntAPPRIS P1 TSL 1 (best) BASIC11.75□□□□□ -0.53
P01643 Uvrag-201ENSMUST00000037968 5157 ntAPPRIS P1 TSL 1 (best) BASIC11.75□□□□□ -0.53
P01643 Cpxm1-201ENSMUST00000028897 2366 ntAPPRIS P1 TSL 1 (best) BASIC11.75□□□□□ -0.53
P01643 Kcnh1-201ENSMUST00000078470 7242 ntAPPRIS P3 TSL 1 (best) BASIC11.75□□□□□ -0.53
P01643 Sesn3-201ENSMUST00000034507 1827 ntTSL 5 BASIC11.75□□□□□ -0.53
P01643 Gm43352-201ENSMUST00000196419 3065 ntBASIC11.75□□□□□ -0.53
P01643 Brwd3-202ENSMUST00000101283 1066 ntTSL 1 (best) BASIC11.75□□□□□ -0.53
P01643 Gm3054-201ENSMUST00000111075 265 ntTSL 5 BASIC11.75□□□□□ -0.53
P01643 Tmem217-202ENSMUST00000168339 812 ntAPPRIS P1 TSL 1 (best) BASIC11.75□□□□□ -0.53
P01643 Gm27618-201ENSMUST00000183671 60 ntBASIC11.75□□□□□ -0.53
P01643 Panct2-202ENSMUST00000188631 625 ntTSL 3 BASIC11.75□□□□□ -0.53
P01643 Syce1l-201ENSMUST00000034219 896 ntAPPRIS ALT2 TSL 1 (best) BASIC11.75□□□□□ -0.53
P01643 Guca2b-201ENSMUST00000044426 605 ntAPPRIS P2 TSL 1 (best) BASIC11.75□□□□□ -0.53
P01643 Krtap19-4-201ENSMUST00000051103 304 ntAPPRIS P1 BASIC11.75□□□□□ -0.53
P01643 Syce1l-202ENSMUST00000095173 791 ntAPPRIS P4 TSL 1 (best) BASIC11.75□□□□□ -0.53
P01643 Gm10313-201ENSMUST00000095320 1002 ntBASIC11.75□□□□□ -0.53
P01643 Rfc3-201ENSMUST00000038131 1317 ntAPPRIS P1 TSL 1 (best) BASIC11.75□□□□□ -0.53
P01643 Sh2d4a-201ENSMUST00000066594 2718 ntAPPRIS P1 TSL 1 (best) BASIC11.75□□□□□ -0.53
P01643 Wee1-201ENSMUST00000033326 3419 ntAPPRIS P1 TSL 1 (best) BASIC11.75□□□□□ -0.53
P01643 Plxdc2-203ENSMUST00000114703 2061 ntTSL 5 BASIC11.75□□□□□ -0.53
P01643 Cnot11-203ENSMUST00000161515 3482 ntAPPRIS P1 TSL 1 (best) BASIC11.75□□□□□ -0.53
P01643 Wdr1-205ENSMUST00000201260 2139 ntTSL 1 (best) BASIC11.75□□□□□ -0.53
P01643 Sec24a-202ENSMUST00000064297 2104 ntTSL 1 (best) BASIC11.75□□□□□ -0.53
P01643 Upk1a-201ENSMUST00000006476 1421 ntAPPRIS P1 TSL 1 (best) BASIC11.75□□□□□ -0.53
P01643 Nsg2-201ENSMUST00000020537 2239 ntAPPRIS P1 TSL 1 (best) BASIC11.75□□□□□ -0.53
P01643 Zfp553-201ENSMUST00000056232 3043 ntAPPRIS P1 TSL 1 (best) BASIC11.75□□□□□ -0.53
P01643 Olah-201ENSMUST00000027955 1533 ntAPPRIS P1 TSL 1 (best) BASIC11.75□□□□□ -0.53
P01643 Kcnj6-202ENSMUST00000099508 3086 ntAPPRIS P1 TSL 1 (best) BASIC11.75□□□□□ -0.53
P01643 Gm5105-201ENSMUST00000053318 1665 ntAPPRIS P1 TSL 1 (best) BASIC11.75□□□□□ -0.53
P01643 Sec31a-201ENSMUST00000094578 4228 ntAPPRIS P2 TSL 5 BASIC11.75□□□□□ -0.53
P01643 Ptpn6-210ENSMUST00000174265 1743 ntTSL 5 BASIC11.74□□□□□ -0.53
P01643 Zkscan3-203ENSMUST00000116434 2600 ntAPPRIS P1 TSL 1 (best) BASIC11.74□□□□□ -0.53
P01643 Tvp23b-201ENSMUST00000014321 1784 ntAPPRIS P1 TSL 1 (best) BASIC11.74□□□□□ -0.53
P01643 Rbm26-202ENSMUST00000100327 3634 ntAPPRIS P1 TSL 1 (best) BASIC11.74□□□□□ -0.53
P01643 Sept6-203ENSMUST00000115239 1845 ntTSL 1 (best) BASIC11.74□□□□□ -0.53
P01643 Trpc3-201ENSMUST00000029271 3694 ntAPPRIS P1 TSL 1 (best) BASIC11.74□□□□□ -0.53
P01643 Ankrd13a-201ENSMUST00000102578 3717 ntAPPRIS P1 TSL 1 (best) BASIC11.74□□□□□ -0.53
P01643 Celf1-206ENSMUST00000111451 4678 ntAPPRIS ALT1 TSL 5 BASIC11.74□□□□□ -0.53
P01643 Myod1-201ENSMUST00000072514 1861 ntAPPRIS P1 TSL 1 (best) BASIC11.74□□□□□ -0.53
P01643 Nprl3-201ENSMUST00000020530 2865 ntAPPRIS P2 TSL 1 (best) BASIC11.74□□□□□ -0.53
P01643 Rcbtb1-201ENSMUST00000022551 3957 ntAPPRIS P1 TSL 1 (best) BASIC11.74□□□□□ -0.53
P01643 Ctnna2-204ENSMUST00000160894 4162 ntTSL 1 (best) BASIC11.74□□□□□ -0.53
P01643 Smarcd1-201ENSMUST00000023759 3153 ntAPPRIS P1 TSL 1 (best) BASIC11.74□□□□□ -0.53
P01643 B3galt6-201ENSMUST00000052185 3184 ntAPPRIS P1 BASIC11.74□□□□□ -0.53
P01643 Tmem200c-201ENSMUST00000178545 3213 ntAPPRIS P1 TSL 2 BASIC11.74□□□□□ -0.53
P01643 Mrto4-202ENSMUST00000102503 1221 ntAPPRIS ALT2 TSL 1 (best) BASIC11.74□□□□□ -0.53
P01643 Eef1akmt4-201ENSMUST00000115522 1130 ntAPPRIS P1 TSL 1 (best) BASIC11.74□□□□□ -0.53
P01643 Gm12264-201ENSMUST00000123949 500 ntTSL 1 (best) BASIC11.74□□□□□ -0.53
P01643 Cd209f-202ENSMUST00000138439 1165 ntAPPRIS ALT2 TSL 1 (best) BASIC11.74□□□□□ -0.53
P01643 Cd209f-203ENSMUST00000145007 1186 ntAPPRIS P2 TSL 1 (best) BASIC11.74□□□□□ -0.53
P01643 Gm29541-201ENSMUST00000191351 678 ntBASIC11.74□□□□□ -0.53
P01643 Gm42854-201ENSMUST00000201262 722 ntTSL 1 (best) BASIC11.74□□□□□ -0.53
P01643 Zfp787-205ENSMUST00000207957 880 ntTSL 5 BASIC11.74□□□□□ -0.53
P01643 AC158529.1-201ENSMUST00000223618 239 ntBASIC11.74□□□□□ -0.53
P01643 Arl3-201ENSMUST00000026009 822 ntAPPRIS P1 TSL 1 (best) BASIC11.74□□□□□ -0.53
P01643 Pts-201ENSMUST00000034570 1046 ntAPPRIS P1 TSL 1 (best) BASIC11.74□□□□□ -0.53
P01643 Tmem116-202ENSMUST00000060004 1297 ntAPPRIS P3 TSL 1 (best) BASIC11.74□□□□□ -0.53
P01643 Iqcf3-201ENSMUST00000062917 1131 ntAPPRIS P2 TSL 1 (best) BASIC11.74□□□□□ -0.53
P01643 Rasgrp1-207ENSMUST00000178884 5104 ntAPPRIS P1 TSL 1 (best) BASIC11.74□□□□□ -0.53
P01643 Cldn14-204ENSMUST00000169391 1456 ntAPPRIS P1 TSL 2 BASIC11.74□□□□□ -0.53
P01643 Clstn1-202ENSMUST00000105691 4459 ntAPPRIS ALT2 TSL 1 (best) BASIC11.74□□□□□ -0.53
P01643 Aaed1-207ENSMUST00000222570 3011 ntAPPRIS P1 TSL 1 (best) BASIC11.74□□□□□ -0.53
P01643 Tjp3-201ENSMUST00000045744 3024 ntAPPRIS P1 TSL 1 (best) BASIC11.74□□□□□ -0.53
P01643 Chd3-201ENSMUST00000092971 6066 ntAPPRIS ALT2 TSL 5 BASIC11.74□□□□□ -0.53
Retrieved 100 of 76,532 protein–RNA pairs in 39.3 ms