Protein–RNA interactions for Protein: O89116

Vti1a, Vesicle transport through interaction with t-SNAREs homolog 1A, mousemouse

Predictions only

Length 217 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Vti1aO89116 Gm30191-201ENSMUST00000205501 647 ntAPPRIS P1 TSL 5 BASIC15.98■□□□□ 0.15
Vti1aO89116 Eef1akmt2-201ENSMUST00000033257 1107 ntAPPRIS P1 TSL 1 (best) BASIC15.98■□□□□ 0.15
Vti1aO89116 Krtap19-4-201ENSMUST00000051103 304 ntAPPRIS P1 BASIC15.98■□□□□ 0.15
Vti1aO89116 Gm10073-201ENSMUST00000073722 496 ntAPPRIS P1 BASIC15.98■□□□□ 0.15
Vti1aO89116 Rplp1-201ENSMUST00000008036 499 ntAPPRIS P1 TSL 1 (best) BASIC15.98■□□□□ 0.15
Vti1aO89116 Cds1-201ENSMUST00000031273 3924 ntAPPRIS P1 TSL 1 (best) BASIC15.98■□□□□ 0.15
Vti1aO89116 Dnmt3b-210ENSMUST00000109774 4320 ntAPPRIS P4 TSL 1 (best) BASIC15.98■□□□□ 0.15
Vti1aO89116 Adgrb2-201ENSMUST00000030571 4734 ntAPPRIS ALT2 TSL 5 BASIC15.97■□□□□ 0.15
Vti1aO89116 Trim3-201ENSMUST00000057525 3016 ntAPPRIS P1 TSL 1 (best) BASIC15.97■□□□□ 0.15
Vti1aO89116 Pqlc1-203ENSMUST00000123750 2004 ntAPPRIS ALT2 TSL 1 (best) BASIC15.97■□□□□ 0.15
Vti1aO89116 Prnd-202ENSMUST00000110170 1969 ntAPPRIS P1 TSL 1 (best) BASIC15.97■□□□□ 0.15
Vti1aO89116 Gm13034-201ENSMUST00000121342 3177 ntBASIC15.97■□□□□ 0.15
Vti1aO89116 Dnajb12-201ENSMUST00000020309 2238 ntAPPRIS P2 TSL 1 (best) BASIC15.97■□□□□ 0.15
Vti1aO89116 Kir3dl1-201ENSMUST00000113104 1031 ntTSL 1 (best) BASIC15.97■□□□□ 0.15
Vti1aO89116 Rhox2d-201ENSMUST00000115179 685 ntAPPRIS P1 TSL 5 BASIC15.97■□□□□ 0.15
Vti1aO89116 4930544D05Rik-203ENSMUST00000144960 624 ntAPPRIS P2 TSL 5 BASIC15.97■□□□□ 0.15
Vti1aO89116 Hoga1-204ENSMUST00000172244 631 ntTSL 5 BASIC15.97■□□□□ 0.15
Vti1aO89116 Gm42560-201ENSMUST00000201216 1023 ntTSL 1 (best) BASIC15.97■□□□□ 0.15
Vti1aO89116 Cnot7-206ENSMUST00000135269 2461 ntTSL 1 (best) BASIC15.97■□□□□ 0.15
Vti1aO89116 Agbl5-202ENSMUST00000114700 3296 ntAPPRIS ALT2 TSL 1 (best) BASIC15.97■□□□□ 0.15
Vti1aO89116 Rnf123-201ENSMUST00000047746 4722 ntAPPRIS ALT2 TSL 5 BASIC15.97■□□□□ 0.15
Vti1aO89116 Gmppa-201ENSMUST00000037796 1539 ntAPPRIS P1 TSL 1 (best) BASIC15.97■□□□□ 0.15
Vti1aO89116 Gpr146-201ENSMUST00000051293 4157 ntAPPRIS P1 TSL 1 (best) BASIC15.97■□□□□ 0.15
Vti1aO89116 Gstm7-201ENSMUST00000004137 1377 ntAPPRIS P1 TSL 1 (best) BASIC15.97■□□□□ 0.15
Vti1aO89116 Ggnbp2-211ENSMUST00000168434 3056 ntAPPRIS ALT1 TSL 5 BASIC15.97■□□□□ 0.15
Vti1aO89116 Snai1-201ENSMUST00000052631 1621 ntAPPRIS P1 TSL 1 (best) BASIC15.97■□□□□ 0.15
Vti1aO89116 Fbxo30-202ENSMUST00000129456 5060 ntAPPRIS P1 TSL 1 (best) BASIC15.97■□□□□ 0.15
Vti1aO89116 Clec16a-204ENSMUST00000115824 6244 ntAPPRIS ALT2 TSL 5 BASIC15.96■□□□□ 0.15
Vti1aO89116 Clec16a-202ENSMUST00000066345 6244 ntAPPRIS P3 TSL 5 BASIC15.96■□□□□ 0.15
Vti1aO89116 Ano10-201ENSMUST00000042546 2653 ntAPPRIS P1 TSL 1 (best) BASIC15.96■□□□□ 0.15
Vti1aO89116 Psrc1-201ENSMUST00000090561 1686 ntAPPRIS P1 TSL 1 (best) BASIC15.96■□□□□ 0.15
Vti1aO89116 1700022A21Rik-202ENSMUST00000182910 1448 ntTSL 1 (best) BASIC15.96■□□□□ 0.15
Vti1aO89116 Dmkn-202ENSMUST00000054427 2034 ntAPPRIS ALT2 TSL 5 BASIC15.96■□□□□ 0.15
Vti1aO89116 Ddx39-202ENSMUST00000109810 1794 ntAPPRIS P1 TSL 5 BASIC15.96■□□□□ 0.15
Vti1aO89116 Gm26560-201ENSMUST00000181240 2619 ntTSL 1 (best) BASIC15.96■□□□□ 0.15
Vti1aO89116 Arhgap26-201ENSMUST00000097593 7898 ntAPPRIS P2 TSL 5 BASIC15.96■□□□□ 0.15
Vti1aO89116 Ccnb2-201ENSMUST00000034742 1531 ntAPPRIS P1 TSL 1 (best) BASIC15.96■□□□□ 0.15
Vti1aO89116 H13-203ENSMUST00000109825 1063 ntTSL 1 (best) BASIC15.96■□□□□ 0.15
Vti1aO89116 Med22-201ENSMUST00000015920 973 ntAPPRIS P4 TSL 2 BASIC15.96■□□□□ 0.15
Vti1aO89116 Gm20661-203ENSMUST00000177368 900 ntAPPRIS P1 TSL 2 BASIC15.96■□□□□ 0.15
Vti1aO89116 Gm5914-202ENSMUST00000182863 375 ntTSL 1 (best) BASIC15.96■□□□□ 0.15
Vti1aO89116 Wdyhv1-206ENSMUST00000227142 786 ntBASIC15.96■□□□□ 0.15
Vti1aO89116 Hcrt-201ENSMUST00000055083 586 ntAPPRIS P1 TSL 1 (best) BASIC15.96■□□□□ 0.15
Vti1aO89116 Dact1-201ENSMUST00000061273 3650 ntTSL 1 (best) BASIC15.96■□□□□ 0.15
Vti1aO89116 Aifm1-202ENSMUST00000114945 2221 ntAPPRIS ALT2 TSL 5 BASIC15.96■□□□□ 0.15
Vti1aO89116 Pcdh20-201ENSMUST00000061628 5241 ntAPPRIS P1 TSL 1 (best) BASIC15.96■□□□□ 0.15
Vti1aO89116 Kri1-201ENSMUST00000038671 2598 ntAPPRIS P2 TSL 1 (best) BASIC15.96■□□□□ 0.15
Vti1aO89116 Hdgfl1-201ENSMUST00000055915 1993 ntAPPRIS P1 BASIC15.96■□□□□ 0.15
Vti1aO89116 Cacng2-201ENSMUST00000019290 5510 ntAPPRIS P1 TSL 1 (best) BASIC15.96■□□□□ 0.15
Vti1aO89116 Ambra1-205ENSMUST00000111317 4929 ntTSL 5 BASIC15.96■□□□□ 0.15
Vti1aO89116 Dffb-201ENSMUST00000030893 2093 ntAPPRIS P1 TSL 1 (best) BASIC15.96■□□□□ 0.15
Vti1aO89116 Osbpl8-202ENSMUST00000105275 7204 ntAPPRIS ALT1 TSL 1 (best) BASIC15.96■□□□□ 0.14
Vti1aO89116 Unc93b1-203ENSMUST00000162708 2266 ntAPPRIS P3 TSL 1 (best) BASIC15.96■□□□□ 0.14
Vti1aO89116 Cdx2-201ENSMUST00000031650 2261 ntAPPRIS P1 TSL 1 (best) BASIC15.96■□□□□ 0.14
Vti1aO89116 Aaed1-207ENSMUST00000222570 3011 ntAPPRIS P1 TSL 1 (best) BASIC15.95■□□□□ 0.14
Vti1aO89116 Chd4-201ENSMUST00000056889 6697 ntAPPRIS P2 TSL 1 (best) BASIC15.95■□□□□ 0.14
Vti1aO89116 Tssc4-201ENSMUST00000060433 1519 ntAPPRIS P1 TSL 1 (best) BASIC15.95■□□□□ 0.14
Vti1aO89116 Pacs2-201ENSMUST00000084891 5480 ntAPPRIS P2 TSL 5 BASIC15.95■□□□□ 0.14
Vti1aO89116 Srgn-204ENSMUST00000160987 1727 ntAPPRIS P1 TSL 3 BASIC15.95■□□□□ 0.14
Vti1aO89116 Steap2-202ENSMUST00000115424 3285 ntAPPRIS P1 TSL 1 (best) BASIC15.95■□□□□ 0.14
Vti1aO89116 Nosip-202ENSMUST00000107829 972 ntAPPRIS ALT2 TSL 1 (best) BASIC15.95■□□□□ 0.14
Vti1aO89116 Arhgap27os1-201ENSMUST00000130556 923 ntTSL 1 (best) BASIC15.95■□□□□ 0.14
Vti1aO89116 Gm14104-201ENSMUST00000135990 356 ntTSL 5 BASIC15.95■□□□□ 0.14
Vti1aO89116 Mvk-206ENSMUST00000137167 1049 ntTSL 2 BASIC15.95■□□□□ 0.14
Vti1aO89116 Crem-221ENSMUST00000142690 1256 ntTSL 1 (best) BASIC15.95■□□□□ 0.14
Vti1aO89116 Pam16-201ENSMUST00000014445 596 ntAPPRIS P1 TSL 1 (best) BASIC15.95■□□□□ 0.14
Vti1aO89116 Prss47-201ENSMUST00000182457 828 ntAPPRIS ALT2 TSL 5 BASIC15.95■□□□□ 0.14
Vti1aO89116 Klrg2-202ENSMUST00000201345 1225 ntAPPRIS ALT2 TSL 5 BASIC15.95■□□□□ 0.14
Vti1aO89116 Gm39228-201ENSMUST00000212456 301 ntTSL 5 BASIC15.95■□□□□ 0.14
Vti1aO89116 AC131710.1-201ENSMUST00000228336 990 ntBASIC15.95■□□□□ 0.14
Vti1aO89116 Mrpl4-201ENSMUST00000003386 1288 ntAPPRIS P1 TSL 1 (best) BASIC15.95■□□□□ 0.14
Vti1aO89116 Ncmap-204ENSMUST00000105859 1801 ntAPPRIS P1 TSL 1 (best) BASIC15.95■□□□□ 0.14
Vti1aO89116 Acvrl1-204ENSMUST00000120028 1932 ntAPPRIS P1 TSL 1 (best) BASIC15.95■□□□□ 0.14
Vti1aO89116 Irf7-201ENSMUST00000026571 1916 ntAPPRIS P3 TSL 1 (best) BASIC15.95■□□□□ 0.14
Vti1aO89116 Myb-203ENSMUST00000188495 3693 ntAPPRIS ALT2 TSL 1 (best) BASIC15.95■□□□□ 0.14
Vti1aO89116 Map3k3-201ENSMUST00000002044 3450 ntAPPRIS P1 TSL 1 (best) BASIC15.95■□□□□ 0.14
Vti1aO89116 Crem-234ENSMUST00000154470 1996 ntTSL 5 BASIC15.95■□□□□ 0.14
Vti1aO89116 Itpkc-201ENSMUST00000003850 3247 ntAPPRIS P1 TSL 1 (best) BASIC15.94■□□□□ 0.14
Vti1aO89116 Sbno2-204ENSMUST00000217972 2462 ntTSL 2 BASIC15.94■□□□□ 0.14
Vti1aO89116 Phldb1-212ENSMUST00000138356 5600 ntTSL 5 BASIC15.94■□□□□ 0.14
Vti1aO89116 E330009J07Rik-202ENSMUST00000101492 6742 ntAPPRIS P1 TSL 1 (best) BASIC15.94■□□□□ 0.14
Vti1aO89116 Arhgef25-201ENSMUST00000019611 2218 ntAPPRIS P1 TSL 1 (best) BASIC15.94■□□□□ 0.14
Vti1aO89116 Dnajc2-203ENSMUST00000115193 2416 ntTSL 1 (best) BASIC15.94■□□□□ 0.14
Vti1aO89116 Lonrf3-201ENSMUST00000016383 2911 ntAPPRIS P1 TSL 1 (best) BASIC15.94■□□□□ 0.14
Vti1aO89116 Pam-210ENSMUST00000161567 3630 ntAPPRIS ALT2 TSL 5 BASIC15.94■□□□□ 0.14
Vti1aO89116 Serpinf1-202ENSMUST00000125982 605 ntTSL 1 (best) BASIC15.94■□□□□ 0.14
Vti1aO89116 Rps10-ps2-201ENSMUST00000127484 496 ntBASIC15.94■□□□□ 0.14
Vti1aO89116 Gm29501-201ENSMUST00000186133 530 ntTSL 5 BASIC15.94■□□□□ 0.14
Vti1aO89116 Gm5779-201ENSMUST00000218467 910 ntBASIC15.94■□□□□ 0.14
Vti1aO89116 CT030684.1-201ENSMUST00000227292 914 ntBASIC15.94■□□□□ 0.14
Vti1aO89116 Lcn5-201ENSMUST00000028306 696 ntAPPRIS P4 TSL 1 (best) BASIC15.94■□□□□ 0.14
Vti1aO89116 Cyhr1-201ENSMUST00000066677 1163 ntTSL 1 (best) BASIC15.94■□□□□ 0.14
Vti1aO89116 D930028M14Rik-201ENSMUST00000098678 1003 ntTSL 2 BASIC15.94■□□□□ 0.14
Vti1aO89116 Gss-201ENSMUST00000079691 1963 ntAPPRIS P1 TSL 1 (best) BASIC15.94■□□□□ 0.14
Vti1aO89116 AC154412.1-201ENSMUST00000226540 2786 ntBASIC15.94■□□□□ 0.14
Vti1aO89116 Cpeb3-212ENSMUST00000154376 5671 ntAPPRIS P3 TSL 1 (best) BASIC15.94■□□□□ 0.14
Vti1aO89116 Phldb1-211ENSMUST00000135436 2844 ntTSL 1 (best) BASIC15.94■□□□□ 0.14
Vti1aO89116 Wt1-202ENSMUST00000111099 2441 ntTSL 5 BASIC15.94■□□□□ 0.14
Vti1aO89116 Eva1c-203ENSMUST00000099548 1948 ntTSL 1 (best) BASIC15.94■□□□□ 0.14
Vti1aO89116 Hmgb3-201ENSMUST00000015361 1544 ntAPPRIS P1 TSL 1 (best) BASIC15.94■□□□□ 0.14
Retrieved 100 of 76,532 protein–RNA pairs in 35.4 ms