Protein–RNA interactions for Protein: O88870

Best1, Bestrophin-1, mousemouse

Predictions only

Length 551 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Best1O88870 Rai1-201ENSMUST00000064190 7348 ntAPPRIS P1 TSL 1 (best) BASIC14.21□□□□□ -0.13
Best1O88870 0610010F05Rik-203ENSMUST00000109532 4106 ntAPPRIS P2 TSL 5 BASIC14.21□□□□□ -0.13
Best1O88870 Mfng-201ENSMUST00000018313 1865 ntAPPRIS P1 TSL 1 (best) BASIC14.21□□□□□ -0.13
Best1O88870 Anapc7-203ENSMUST00000122010 2950 ntAPPRIS P1 TSL 5 BASIC14.21□□□□□ -0.13
Best1O88870 Cldn14-204ENSMUST00000169391 1456 ntAPPRIS P1 TSL 2 BASIC14.21□□□□□ -0.13
Best1O88870 Zpbp2-201ENSMUST00000017339 1455 ntAPPRIS P3 TSL 1 (best) BASIC14.21□□□□□ -0.13
Best1O88870 Zufsp-205ENSMUST00000218880 2005 ntTSL 5 BASIC14.21□□□□□ -0.13
Best1O88870 Gm15384-201ENSMUST00000138832 486 ntTSL 5 BASIC14.21□□□□□ -0.13
Best1O88870 Lgals3-203ENSMUST00000146468 1072 ntAPPRIS P1 TSL 1 (best) BASIC14.21□□□□□ -0.13
Best1O88870 Gm11515-201ENSMUST00000150818 701 ntTSL 2 BASIC14.21□□□□□ -0.13
Best1O88870 9530003J23Rik-202ENSMUST00000159193 1033 ntAPPRIS P1 TSL 1 (best) BASIC14.21□□□□□ -0.13
Best1O88870 Erdr1-204ENSMUST00000179483 688 ntTSL 1 (best) BASIC14.21□□□□□ -0.13
Best1O88870 Gm27618-201ENSMUST00000183671 60 ntBASIC14.21□□□□□ -0.13
Best1O88870 Gm27622-201ENSMUST00000183779 60 ntBASIC14.21□□□□□ -0.13
Best1O88870 Gm42854-201ENSMUST00000201262 722 ntTSL 1 (best) BASIC14.21□□□□□ -0.13
Best1O88870 Tex12-201ENSMUST00000034568 895 ntAPPRIS P1 TSL 1 (best) BASIC14.21□□□□□ -0.13
Best1O88870 Dnaja1-210ENSMUST00000164233 5622 ntAPPRIS P1 TSL 5 BASIC14.21□□□□□ -0.13
Best1O88870 Ppm1e-201ENSMUST00000055438 6344 ntAPPRIS P1 TSL 1 (best) BASIC14.21□□□□□ -0.13
Best1O88870 Rsu1-202ENSMUST00000114791 1604 ntTSL 5 BASIC14.21□□□□□ -0.13
Best1O88870 Kdm3a-201ENSMUST00000065509 4816 ntAPPRIS P1 TSL 1 (best) BASIC14.21□□□□□ -0.13
Best1O88870 Pmpca-201ENSMUST00000076431 3135 ntAPPRIS P1 TSL 1 (best) BASIC14.21□□□□□ -0.14
Best1O88870 Lonrf3-201ENSMUST00000016383 2911 ntAPPRIS P1 TSL 1 (best) BASIC14.21□□□□□ -0.14
Best1O88870 Mapt-202ENSMUST00000106988 2202 ntAPPRIS ALT2 TSL 5 BASIC14.21□□□□□ -0.14
Best1O88870 Fkbp4-201ENSMUST00000032508 2217 ntAPPRIS P1 TSL 1 (best) BASIC14.21□□□□□ -0.14
Best1O88870 Tle2-205ENSMUST00000135211 2746 ntAPPRIS ALT2 TSL 1 (best) BASIC14.21□□□□□ -0.14
Best1O88870 Krt42-201ENSMUST00000017270 1542 ntAPPRIS P1 TSL 1 (best) BASIC14.2□□□□□ -0.14
Best1O88870 Nfic-207ENSMUST00000221817 1531 ntTSL 5 BASIC14.2□□□□□ -0.14
Best1O88870 Ywhaq-201ENSMUST00000049531 1515 ntAPPRIS P1 TSL 1 (best) BASIC14.2□□□□□ -0.14
Best1O88870 Fbxo25-201ENSMUST00000043520 2012 ntAPPRIS P3 TSL 1 (best) BASIC14.2□□□□□ -0.14
Best1O88870 Dclk2-201ENSMUST00000029719 4012 ntAPPRIS P3 TSL 1 (best) BASIC14.2□□□□□ -0.14
Best1O88870 Acadvl-202ENSMUST00000102574 2168 ntAPPRIS P2 TSL 1 (best) BASIC14.2□□□□□ -0.14
Best1O88870 Slc35c1-202ENSMUST00000125276 2668 ntTSL 1 (best) BASIC14.2□□□□□ -0.14
Best1O88870 Suco-201ENSMUST00000048377 6327 ntAPPRIS P2 TSL 1 (best) BASIC14.2□□□□□ -0.14
Best1O88870 Rcc2-202ENSMUST00000071169 3999 ntAPPRIS P1 TSL 1 (best) BASIC14.2□□□□□ -0.14
Best1O88870 Zbed5-201ENSMUST00000041466 2492 ntAPPRIS P1 TSL 1 (best) BASIC14.2□□□□□ -0.14
Best1O88870 Mars-201ENSMUST00000037290 2939 ntAPPRIS P1 TSL 1 (best) BASIC14.2□□□□□ -0.14
Best1O88870 Ocln-205ENSMUST00000160859 2443 ntAPPRIS P1 TSL 1 (best) BASIC14.2□□□□□ -0.14
Best1O88870 Nr2f1-202ENSMUST00000125176 841 ntTSL 5 BASIC14.2□□□□□ -0.14
Best1O88870 Gm13496-201ENSMUST00000141133 1165 ntTSL 2 BASIC14.2□□□□□ -0.14
Best1O88870 Zfp511-201ENSMUST00000168194 1076 ntAPPRIS P1 TSL 2 BASIC14.2□□□□□ -0.14
Best1O88870 Ssty1-201ENSMUST00000180056 699 ntAPPRIS P1 BASIC14.2□□□□□ -0.14
Best1O88870 Gm26517-201ENSMUST00000181279 1172 ntTSL 1 (best) BASIC14.2□□□□□ -0.14
Best1O88870 Gm29310-201ENSMUST00000185468 696 ntBASIC14.2□□□□□ -0.14
Best1O88870 Gm21825-201ENSMUST00000185728 696 ntBASIC14.2□□□□□ -0.14
Best1O88870 Gm29109-201ENSMUST00000185895 696 ntBASIC14.2□□□□□ -0.14
Best1O88870 Gm21896-201ENSMUST00000186520 696 ntBASIC14.2□□□□□ -0.14
Best1O88870 Gm21873-201ENSMUST00000186728 696 ntBASIC14.2□□□□□ -0.14
Best1O88870 Gm21794-201ENSMUST00000187056 696 ntBASIC14.2□□□□□ -0.14
Best1O88870 Gm21880-201ENSMUST00000187275 696 ntBASIC14.2□□□□□ -0.14
Best1O88870 Gm21826-201ENSMUST00000187451 696 ntBASIC14.2□□□□□ -0.14
Best1O88870 Gm21198-201ENSMUST00000188393 696 ntBASIC14.2□□□□□ -0.14
Best1O88870 Gm21749-201ENSMUST00000189343 696 ntBASIC14.2□□□□□ -0.14
Best1O88870 Gm21901-201ENSMUST00000189568 696 ntBASIC14.2□□□□□ -0.14
Best1O88870 Gm29424-201ENSMUST00000189716 696 ntBASIC14.2□□□□□ -0.14
Best1O88870 Gm28599-201ENSMUST00000189838 694 ntBASIC14.2□□□□□ -0.14
Best1O88870 Gm21867-201ENSMUST00000189917 696 ntBASIC14.2□□□□□ -0.14
Best1O88870 Gm29269-201ENSMUST00000190087 696 ntBASIC14.2□□□□□ -0.14
Best1O88870 Gm21722-201ENSMUST00000190153 696 ntBASIC14.2□□□□□ -0.14
Best1O88870 Gm28423-201ENSMUST00000190701 696 ntBASIC14.2□□□□□ -0.14
Best1O88870 Gm21899-201ENSMUST00000190745 696 ntBASIC14.2□□□□□ -0.14
Best1O88870 Gm21910-201ENSMUST00000191163 696 ntBASIC14.2□□□□□ -0.14
Best1O88870 Gm21849-201ENSMUST00000191571 696 ntBASIC14.2□□□□□ -0.14
Best1O88870 Gm28678-201ENSMUST00000191593 696 ntBASIC14.2□□□□□ -0.14
Best1O88870 Gm20910-201ENSMUST00000193268 696 ntBASIC14.2□□□□□ -0.14
Best1O88870 Gm37277-201ENSMUST00000194052 1111 ntBASIC14.2□□□□□ -0.14
Best1O88870 H2-Bl-209ENSMUST00000194244 862 ntTSL 1 (best) BASIC14.2□□□□□ -0.14
Best1O88870 Gm21871-201ENSMUST00000194621 696 ntBASIC14.2□□□□□ -0.14
Best1O88870 AC158982.1-201ENSMUST00000228377 901 ntBASIC14.2□□□□□ -0.14
Best1O88870 Aif1-201ENSMUST00000025257 847 ntAPPRIS P1 TSL 2 BASIC14.2□□□□□ -0.14
Best1O88870 B3gnt5-202ENSMUST00000119468 2229 ntAPPRIS P1 TSL 1 (best) BASIC14.2□□□□□ -0.14
Best1O88870 Rogdi-201ENSMUST00000023191 1431 ntTSL 1 (best) BASIC14.2□□□□□ -0.14
Best1O88870 Foxl2-201ENSMUST00000051312 3256 ntAPPRIS P1 BASIC14.2□□□□□ -0.14
Best1O88870 Lmna-203ENSMUST00000120377 2021 ntAPPRIS ALT2 TSL 1 (best) BASIC14.2□□□□□ -0.14
Best1O88870 Kmt5c-202ENSMUST00000108582 2774 ntAPPRIS P1 TSL 1 (best) BASIC14.2□□□□□ -0.14
Best1O88870 Zfyve19-202ENSMUST00000102519 1505 ntTSL 1 (best) BASIC14.2□□□□□ -0.14
Best1O88870 Hdgfl1-201ENSMUST00000055915 1993 ntAPPRIS P1 BASIC14.2□□□□□ -0.14
Best1O88870 Skor1-203ENSMUST00000119146 3610 ntAPPRIS ALT2 TSL 1 (best) BASIC14.2□□□□□ -0.14
Best1O88870 Adamts19-201ENSMUST00000052907 4666 ntAPPRIS P1 TSL 1 (best) BASIC14.2□□□□□ -0.14
Best1O88870 Ogfrl1-201ENSMUST00000027343 4844 ntAPPRIS P1 TSL 3 BASIC14.2□□□□□ -0.14
Best1O88870 Safb-207ENSMUST00000182533 3122 ntAPPRIS ALT2 TSL 5 BASIC14.19□□□□□ -0.14
Best1O88870 Wt1-201ENSMUST00000111098 2395 ntTSL 5 BASIC14.19□□□□□ -0.14
Best1O88870 Rgs6-203ENSMUST00000185665 2201 ntAPPRIS P4 TSL 5 BASIC14.19□□□□□ -0.14
Best1O88870 Tmem59l-201ENSMUST00000045286 1491 ntAPPRIS P1 TSL 1 (best) BASIC14.19□□□□□ -0.14
Best1O88870 Plk1-201ENSMUST00000033154 2199 ntAPPRIS P1 TSL 1 (best) BASIC14.19□□□□□ -0.14
Best1O88870 Trp53-206ENSMUST00000171247 1867 ntAPPRIS ALT2 TSL 1 (best) BASIC14.19□□□□□ -0.14
Best1O88870 Ccer1-201ENSMUST00000060703 1865 ntAPPRIS P1 BASIC14.19□□□□□ -0.14
Best1O88870 Tex44-201ENSMUST00000046004 1724 ntAPPRIS P1 BASIC14.19□□□□□ -0.14
Best1O88870 Cbx8-201ENSMUST00000026663 3580 ntAPPRIS P1 TSL 1 (best) BASIC14.19□□□□□ -0.14
Best1O88870 Cachd1-202ENSMUST00000097955 4277 ntAPPRIS ALT2 TSL 1 (best) BASIC14.19□□□□□ -0.14
Best1O88870 Cux2-201ENSMUST00000086317 5113 ntAPPRIS P1 TSL 1 (best) BASIC14.19□□□□□ -0.14
Best1O88870 Nde1-201ENSMUST00000023359 2287 ntAPPRIS P1 TSL 1 (best) BASIC14.19□□□□□ -0.14
Best1O88870 Vangl2-201ENSMUST00000027837 5698 ntAPPRIS P1 TSL 1 (best) BASIC14.19□□□□□ -0.14
Best1O88870 Park7-205ENSMUST00000105676 582 ntTSL 5 BASIC14.19□□□□□ -0.14
Best1O88870 Fis1-203ENSMUST00000111097 601 ntTSL 2 BASIC14.19□□□□□ -0.14
Best1O88870 Ube2v2-202ENSMUST00000115776 1236 ntTSL 1 (best) BASIC14.19□□□□□ -0.14
Best1O88870 Rpl9-202ENSMUST00000118543 1193 ntTSL 2 BASIC14.19□□□□□ -0.14
Best1O88870 Ncr3-ps-201ENSMUST00000134687 525 ntBASIC14.19□□□□□ -0.14
Best1O88870 Gm9719-201ENSMUST00000162765 543 ntBASIC14.19□□□□□ -0.14
Best1O88870 Coasy-201ENSMUST00000001806 2138 ntAPPRIS P1 TSL 1 (best) BASIC14.19□□□□□ -0.14
Best1O88870 Fis1-201ENSMUST00000019198 786 ntAPPRIS P1 TSL 1 (best) BASIC14.19□□□□□ -0.14
Retrieved 100 of 76,532 protein–RNA pairs in 34.9 ms