Protein–RNA interactions for Protein: O88834

Shd, SH2 domain-containing adapter protein D, mousemouse

Predictions only

Length 343 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ShdO88834 Ythdf3-203ENSMUST00000191774 3196 ntTSL 1 (best) BASIC15.14■□□□□ 0.01
ShdO88834 Gstm7-201ENSMUST00000004137 1377 ntAPPRIS P1 TSL 1 (best) BASIC15.13■□□□□ 0.01
ShdO88834 Galnt13-202ENSMUST00000112634 7639 ntTSL 1 (best) BASIC15.13■□□□□ 0.01
ShdO88834 Fbxl19-207ENSMUST00000206893 3449 ntAPPRIS ALT2 TSL 5 BASIC15.13■□□□□ 0.01
ShdO88834 Dhx33-202ENSMUST00000108527 5184 ntAPPRIS P1 TSL 1 (best) BASIC15.13■□□□□ 0.01
ShdO88834 Fam234a-201ENSMUST00000114988 3714 ntAPPRIS P1 TSL 1 (best) BASIC15.13■□□□□ 0.01
ShdO88834 Gm6297-201ENSMUST00000181475 2146 ntTSL 1 (best) BASIC15.13■□□□□ 0.01
ShdO88834 Pygo2-201ENSMUST00000060061 3198 ntAPPRIS P1 TSL 1 (best) BASIC15.13■□□□□ 0.01
ShdO88834 Slc6a9-201ENSMUST00000030269 3479 ntAPPRIS P1 TSL 1 (best) BASIC15.13■□□□□ 0.01
ShdO88834 Vps25-203ENSMUST00000100414 1220 ntTSL 1 (best) BASIC15.13■□□□□ 0.01
ShdO88834 Rpl34-ps1-201ENSMUST00000121998 354 ntBASIC15.13■□□□□ 0.01
ShdO88834 Gm11594-201ENSMUST00000122313 162 ntBASIC15.13■□□□□ 0.01
ShdO88834 Gm12981-201ENSMUST00000131733 622 ntTSL 1 (best) BASIC15.13■□□□□ 0.01
ShdO88834 Gm16156-201ENSMUST00000141168 713 ntTSL 3 BASIC15.13■□□□□ 0.01
ShdO88834 Grip1os3-202ENSMUST00000146294 957 ntTSL 1 (best) BASIC15.13■□□□□ 0.01
ShdO88834 2310061I04Rik-204ENSMUST00000148721 1293 ntAPPRIS P1 TSL 5 BASIC15.13■□□□□ 0.01
ShdO88834 Irs3-202ENSMUST00000196511 1281 ntAPPRIS ALT2 TSL 1 (best) BASIC15.13■□□□□ 0.01
ShdO88834 Gm32031-203ENSMUST00000208993 649 ntTSL 2 BASIC15.13■□□□□ 0.01
ShdO88834 AC132104.2-201ENSMUST00000215011 266 ntBASIC15.13■□□□□ 0.01
ShdO88834 AC159295.1-201ENSMUST00000225326 940 ntBASIC15.13■□□□□ 0.01
ShdO88834 Lrrc26-201ENSMUST00000028337 1190 ntAPPRIS P1 TSL 1 (best) BASIC15.13■□□□□ 0.01
ShdO88834 Rbpms-202ENSMUST00000033995 1039 ntAPPRIS P1 TSL 1 (best) BASIC15.13■□□□□ 0.01
ShdO88834 Slc44a3-201ENSMUST00000039197 2620 ntAPPRIS P1 TSL 1 (best) BASIC15.13■□□□□ 0.01
ShdO88834 Rpl34-ps2-201ENSMUST00000081679 354 ntBASIC15.13■□□□□ 0.01
ShdO88834 Gm10154-201ENSMUST00000084445 354 ntBASIC15.13■□□□□ 0.01
ShdO88834 Pik3ip1-202ENSMUST00000093399 1098 ntAPPRIS ALT2 TSL 1 (best) BASIC15.13■□□□□ 0.01
ShdO88834 Foxi1-201ENSMUST00000060271 2357 ntAPPRIS P1 TSL 1 (best) BASIC15.13■□□□□ 0.01
ShdO88834 Rtf1-201ENSMUST00000028767 4664 ntAPPRIS P1 TSL 1 (best) BASIC15.13■□□□□ 0.01
ShdO88834 Tex13a-201ENSMUST00000096314 1317 ntAPPRIS P1 TSL 1 (best) BASIC15.13■□□□□ 0.01
ShdO88834 Chfr-207ENSMUST00000198633 2623 ntAPPRIS ALT2 TSL 1 (best) BASIC15.13■□□□□ 0.01
ShdO88834 Uvrag-201ENSMUST00000037968 5157 ntAPPRIS P1 TSL 1 (best) BASIC15.13■□□□□ 0.01
ShdO88834 Gm11738-201ENSMUST00000134069 2158 ntTSL 1 (best) BASIC15.12■□□□□ 0.01
ShdO88834 Pccb-204ENSMUST00000149322 2188 ntTSL 1 (best) BASIC15.12■□□□□ 0.01
ShdO88834 Spns1-202ENSMUST00000119754 2001 ntTSL 5 BASIC15.12■□□□□ 0.01
ShdO88834 Ppp1r8-201ENSMUST00000030702 2037 ntAPPRIS P3 TSL 1 (best) BASIC15.12■□□□□ 0.01
ShdO88834 Pcsk4-201ENSMUST00000020340 2539 ntAPPRIS P1 TSL 1 (best) BASIC15.12■□□□□ 0.01
ShdO88834 Gm5421-201ENSMUST00000181698 2354 ntBASIC15.12■□□□□ 0.01
ShdO88834 Miga1-204ENSMUST00000199334 4024 ntTSL 1 (best) BASIC15.12■□□□□ 0.01
ShdO88834 Rad51-201ENSMUST00000028795 3368 ntAPPRIS P1 TSL 1 (best) BASIC15.12■□□□□ 0.01
ShdO88834 Rgs6-203ENSMUST00000185665 2201 ntAPPRIS P4 TSL 5 BASIC15.12■□□□□ 0.01
ShdO88834 Dzip1-201ENSMUST00000004055 4079 ntAPPRIS P1 TSL 1 (best) BASIC15.12■□□□□ 0.01
ShdO88834 Ptk7-201ENSMUST00000044442 4255 ntAPPRIS P1 TSL 1 (best) BASIC15.12■□□□□ 0.01
ShdO88834 Tcf21-202ENSMUST00000218002 1788 ntBASIC15.12■□□□□ 0.01
ShdO88834 Aimp2-202ENSMUST00000100483 1073 ntTSL 1 (best) BASIC15.12■□□□□ 0.01
ShdO88834 Znhit1-204ENSMUST00000111091 1070 ntTSL 5 BASIC15.12■□□□□ 0.01
ShdO88834 Gm9385-201ENSMUST00000117563 472 ntBASIC15.12■□□□□ 0.01
ShdO88834 Gm14494-201ENSMUST00000118786 435 ntBASIC15.12■□□□□ 0.01
ShdO88834 Gm8597-201ENSMUST00000191525 1109 ntBASIC15.12■□□□□ 0.01
ShdO88834 Gm15406-202ENSMUST00000202229 767 ntTSL 2 BASIC15.12■□□□□ 0.01
ShdO88834 Aimp2-201ENSMUST00000031613 1185 ntAPPRIS P1 TSL 1 (best) BASIC15.12■□□□□ 0.01
ShdO88834 Gdf3-201ENSMUST00000032211 2125 ntAPPRIS P1 TSL 1 (best) BASIC15.12■□□□□ 0.01
ShdO88834 Hist1h2bg-201ENSMUST00000079251 618 ntAPPRIS P1 BASIC15.12■□□□□ 0.01
ShdO88834 Hist1h2bn-201ENSMUST00000091709 381 ntAPPRIS P1 BASIC15.12■□□□□ 0.01
ShdO88834 Gm28756-202ENSMUST00000209405 2461 ntTSL 5 BASIC15.12■□□□□ 0.01
ShdO88834 Sowaha-201ENSMUST00000104955 3702 ntAPPRIS P1 BASIC15.12■□□□□ 0.01
ShdO88834 Lsm12-202ENSMUST00000107156 2015 ntTSL 5 BASIC15.12■□□□□ 0.01
ShdO88834 Gpc6-201ENSMUST00000078849 1668 ntAPPRIS P3 TSL 1 (best) BASIC15.12■□□□□ 0.01
ShdO88834 Ralgapa1-201ENSMUST00000085385 7901 ntAPPRIS P2 TSL 1 (best) BASIC15.11■□□□□ 0.01
ShdO88834 Tmpo-202ENSMUST00000072239 3533 ntTSL 1 (best) BASIC15.11■□□□□ 0.01
ShdO88834 Spcs2-210ENSMUST00000209032 1610 ntTSL 5 BASIC15.11■□□□□ 0.01
ShdO88834 Anks1-201ENSMUST00000025058 6844 ntAPPRIS ALT2 TSL 1 (best) BASIC15.11■□□□□ 0.01
ShdO88834 Tinf2-205ENSMUST00000227842 2001 ntAPPRIS ALT2 BASIC15.11■□□□□ 0.01
ShdO88834 Psmd5-201ENSMUST00000028225 4397 ntAPPRIS P1 TSL 1 (best) BASIC15.11■□□□□ 0.01
ShdO88834 Gm26702-201ENSMUST00000181730 4570 ntTSL 5 BASIC15.11■□□□□ 0.01
ShdO88834 Dlk1-203ENSMUST00000109842 1129 ntTSL 1 (best) BASIC15.11■□□□□ 0.01
ShdO88834 Nudt1-204ENSMUST00000110826 606 ntAPPRIS P1 TSL 1 (best) BASIC15.11■□□□□ 0.01
ShdO88834 Hoxa13-202ENSMUST00000114416 769 ntTSL 1 (best) BASIC15.11■□□□□ 0.01
ShdO88834 Izumo1r-203ENSMUST00000117620 1095 ntTSL 1 (best) BASIC15.11■□□□□ 0.01
ShdO88834 Dbi-207ENSMUST00000151708 491 ntTSL 1 (best) BASIC15.11■□□□□ 0.01
ShdO88834 Gm26769-201ENSMUST00000180469 619 ntTSL 3 BASIC15.11■□□□□ 0.01
ShdO88834 Gm29202-201ENSMUST00000191263 422 ntTSL 5 BASIC15.11■□□□□ 0.01
ShdO88834 Vsig2-206ENSMUST00000215957 851 ntTSL 1 (best) BASIC15.11■□□□□ 0.01
ShdO88834 AC174742.1-201ENSMUST00000218272 304 ntBASIC15.11■□□□□ 0.01
ShdO88834 Nxnl2-201ENSMUST00000021828 1167 ntAPPRIS P1 TSL 1 (best) BASIC15.11■□□□□ 0.01
ShdO88834 Cct6b-202ENSMUST00000100722 1871 ntTSL 1 (best) BASIC15.11■□□□□ 0.01
ShdO88834 Rnf38-202ENSMUST00000098098 5061 ntTSL 1 (best) BASIC15.11■□□□□ 0.01
ShdO88834 Cul3-201ENSMUST00000163119 4709 ntAPPRIS P1 TSL 1 (best) BASIC15.11■□□□□ 0.01
ShdO88834 Pid1-207ENSMUST00000177458 2521 ntTSL 2 BASIC15.11■□□□□ 0.01
ShdO88834 Gm45504-201ENSMUST00000211407 2107 ntBASIC15.11■□□□□ 0.01
ShdO88834 Eif4g1-206ENSMUST00000115463 5378 ntAPPRIS ALT2 TSL 1 (best) BASIC15.11■□□□□ 0.01
ShdO88834 Foxa1-201ENSMUST00000044380 3191 ntAPPRIS P1 TSL 1 (best) BASIC15.11■□□□□ 0.01
ShdO88834 Wdr47-201ENSMUST00000051145 4222 ntAPPRIS P1 TSL 1 (best) BASIC15.11■□□□□ 0.01
ShdO88834 Aldh16a1-201ENSMUST00000107815 2685 ntTSL 1 (best) BASIC15.1■□□□□ 0.01
ShdO88834 Npas3-204ENSMUST00000223358 3143 ntAPPRIS ALT2 TSL 1 (best) BASIC15.1■□□□□ 0.01
ShdO88834 Gm39027-201ENSMUST00000208560 2942 ntTSL 5 BASIC15.1■□□□□ 0.01
ShdO88834 Itpk1-201ENSMUST00000046518 2918 ntAPPRIS P1 TSL 1 (best) BASIC15.1■□□□□ 0.01
ShdO88834 Lgi3-201ENSMUST00000047331 3174 ntAPPRIS P1 TSL 1 (best) BASIC15.1■□□□□ 0.01
ShdO88834 Irf3-202ENSMUST00000107834 1429 ntAPPRIS P1 TSL 1 (best) BASIC15.1■□□□□ 0.01
ShdO88834 5730559C18Rik-201ENSMUST00000120339 2988 ntAPPRIS P1 TSL 1 (best) BASIC15.1■□□□□ 0.01
ShdO88834 Cyp27a1-201ENSMUST00000027356 1892 ntAPPRIS P1 TSL 1 (best) BASIC15.1■□□□□ 0.01
ShdO88834 Hic1-201ENSMUST00000055619 3497 ntAPPRIS P1 TSL 1 (best) BASIC15.1■□□□□ 0.01
ShdO88834 Lipo3-202ENSMUST00000112508 2839 ntAPPRIS P1 TSL 1 (best) BASIC15.1■□□□□ 0.01
ShdO88834 Necap2-201ENSMUST00000030760 1906 ntAPPRIS P1 TSL 1 (best) BASIC15.1■□□□□ 0.01
ShdO88834 Chuk-201ENSMUST00000026217 3502 ntAPPRIS P1 TSL 1 (best) BASIC15.1■□□□□ 0.01
ShdO88834 Sox21-201ENSMUST00000170662 3799 ntAPPRIS P1 BASIC15.1■□□□□ 0.01
ShdO88834 Dhdds-203ENSMUST00000105886 1015 ntTSL 5 BASIC15.1■□□□□ 0.01
ShdO88834 Fau-202ENSMUST00000178310 571 ntAPPRIS P1 TSL 1 (best) BASIC15.1■□□□□ 0.01
ShdO88834 Gm27301-201ENSMUST00000184012 127 ntBASIC15.1■□□□□ 0.01
ShdO88834 Gm29520-201ENSMUST00000191209 1067 ntTSL 5 BASIC15.1■□□□□ 0.01
ShdO88834 Gm2272-201ENSMUST00000194903 582 ntBASIC15.1■□□□□ 0.01
Retrieved 100 of 76,532 protein–RNA pairs in 33.1 ms