Protein–RNA interactions for Protein: O88543

Cops3, COP9 signalosome complex subunit 3, mousemouse

Predictions only

Length 423 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Cops3O88543 Cry2-202ENSMUST00000111278 2160 ntAPPRIS P1 TSL 1 (best) BASIC13.3□□□□□ -0.28
Cops3O88543 Trappc9-203ENSMUST00000168191 3127 ntAPPRIS ALT2 TSL 1 (best) BASIC13.3□□□□□ -0.28
Cops3O88543 Nkd2-202ENSMUST00000118096 2801 ntAPPRIS ALT2 TSL 1 (best) BASIC13.3□□□□□ -0.28
Cops3O88543 Ndufb11-201ENSMUST00000116621 908 ntAPPRIS P1 TSL 1 (best) BASIC13.3□□□□□ -0.28
Cops3O88543 Tm4sf5-201ENSMUST00000019063 1000 ntAPPRIS P1 TSL 1 (best) BASIC13.3□□□□□ -0.28
Cops3O88543 Tcta-202ENSMUST00000192886 1094 ntAPPRIS P1 TSL 2 BASIC13.3□□□□□ -0.28
Cops3O88543 Csrp2-207ENSMUST00000220409 780 ntTSL 2 BASIC13.3□□□□□ -0.28
Cops3O88543 Zfyve21-204ENSMUST00000221375 1265 ntAPPRIS ALT2 TSL 1 (best) BASIC13.3□□□□□ -0.28
Cops3O88543 Alkbh2-201ENSMUST00000053657 1073 ntAPPRIS P1 TSL 1 (best) BASIC13.3□□□□□ -0.28
Cops3O88543 Klhl34-201ENSMUST00000087157 1935 ntAPPRIS P1 BASIC13.3□□□□□ -0.28
Cops3O88543 Ulk1-211ENSMUST00000200299 3581 ntAPPRIS ALT2 TSL 1 (best) BASIC13.3□□□□□ -0.28
Cops3O88543 Prkcb-202ENSMUST00000064989 2911 ntAPPRIS P3 TSL 1 (best) BASIC13.3□□□□□ -0.28
Cops3O88543 Gtf2ird1-201ENSMUST00000073161 3572 ntAPPRIS ALT2 TSL 1 (best) BASIC13.3□□□□□ -0.28
Cops3O88543 N6amt1-202ENSMUST00000118115 1951 ntTSL 1 (best) BASIC13.3□□□□□ -0.28
Cops3O88543 Cyp26b1-203ENSMUST00000204109 1340 ntTSL 5 BASIC13.3□□□□□ -0.28
Cops3O88543 Pigv-201ENSMUST00000062118 3979 ntAPPRIS P1 TSL 1 (best) BASIC13.3□□□□□ -0.28
Cops3O88543 Limk1-201ENSMUST00000015137 3331 ntAPPRIS P1 TSL 1 (best) BASIC13.3□□□□□ -0.28
Cops3O88543 Zfp346-201ENSMUST00000021937 3333 ntAPPRIS P2 TSL 1 (best) BASIC13.3□□□□□ -0.28
Cops3O88543 Ccdc117-201ENSMUST00000020776 3372 ntAPPRIS P1 TSL 1 (best) BASIC13.3□□□□□ -0.28
Cops3O88543 Il11ra1-201ENSMUST00000098132 2009 ntAPPRIS P1 TSL 1 (best) BASIC13.3□□□□□ -0.28
Cops3O88543 Kcnma1-214ENSMUST00000190044 3747 ntAPPRIS ALT2 TSL 1 (best) BASIC13.3□□□□□ -0.28
Cops3O88543 Rnf44-201ENSMUST00000037422 3734 ntTSL 1 (best) BASIC13.3□□□□□ -0.28
Cops3O88543 Sntb2-203ENSMUST00000212524 9945 ntAPPRIS P2 TSL 1 (best) BASIC13.3□□□□□ -0.28
Cops3O88543 Emp2-201ENSMUST00000078357 3440 ntAPPRIS P1 TSL 1 (best) BASIC13.3□□□□□ -0.28
Cops3O88543 Dennd5b-201ENSMUST00000111557 9831 ntAPPRIS P1 TSL 5 BASIC13.3□□□□□ -0.28
Cops3O88543 Sept8-202ENSMUST00000117061 4563 ntAPPRIS P3 TSL 1 (best) BASIC13.3□□□□□ -0.28
Cops3O88543 Gopc-201ENSMUST00000020008 4216 ntAPPRIS P2 TSL 1 (best) BASIC13.3□□□□□ -0.28
Cops3O88543 Cbs-201ENSMUST00000067801 2497 ntAPPRIS P4 TSL 1 (best) BASIC13.3□□□□□ -0.28
Cops3O88543 Pitx2-206ENSMUST00000174623 1493 ntTSL 2 BASIC13.29□□□□□ -0.28
Cops3O88543 Gm32369-201ENSMUST00000222630 1467 ntTSL 5 BASIC13.29□□□□□ -0.28
Cops3O88543 Txndc11-202ENSMUST00000118362 4248 ntTSL 1 (best) BASIC13.29□□□□□ -0.28
Cops3O88543 6030408B16Rik-202ENSMUST00000191426 1947 ntAPPRIS P5 TSL 1 (best) BASIC13.29□□□□□ -0.28
Cops3O88543 Ccdc181-201ENSMUST00000027867 1909 ntAPPRIS P1 TSL 1 (best) BASIC13.29□□□□□ -0.28
Cops3O88543 Zbtb14-201ENSMUST00000062369 3625 ntAPPRIS P1 TSL 1 (best) BASIC13.29□□□□□ -0.28
Cops3O88543 Rnf11-201ENSMUST00000030284 4061 ntAPPRIS P1 TSL 1 (best) BASIC13.29□□□□□ -0.28
Cops3O88543 Gm21009-201ENSMUST00000197169 1669 ntBASIC13.29□□□□□ -0.28
Cops3O88543 Arid4b-203ENSMUST00000110534 5864 ntAPPRIS P1 TSL 1 (best) BASIC13.29□□□□□ -0.28
Cops3O88543 Chodl-201ENSMUST00000023568 2535 ntAPPRIS P1 TSL 1 (best) BASIC13.29□□□□□ -0.28
Cops3O88543 Irak1-204ENSMUST00000114352 3825 ntAPPRIS P3 TSL 1 (best) BASIC13.29□□□□□ -0.28
Cops3O88543 C530008M17Rik-205ENSMUST00000121851 1165 ntTSL 1 (best) BASIC13.29□□□□□ -0.28
Cops3O88543 Ramp2-202ENSMUST00000122006 899 ntTSL 2 BASIC13.29□□□□□ -0.28
Cops3O88543 Gm11780-201ENSMUST00000136880 516 ntBASIC13.29□□□□□ -0.28
Cops3O88543 Gm23547-201ENSMUST00000158210 271 ntBASIC13.29□□□□□ -0.28
Cops3O88543 Gm37584-201ENSMUST00000193595 1290 ntBASIC13.29□□□□□ -0.28
Cops3O88543 Gm38575-201ENSMUST00000213881 652 ntTSL 2 BASIC13.29□□□□□ -0.28
Cops3O88543 AC159106.1-201ENSMUST00000224421 690 ntBASIC13.29□□□□□ -0.28
Cops3O88543 Ptprcap-201ENSMUST00000061086 927 ntAPPRIS P1 TSL 1 (best) BASIC13.29□□□□□ -0.28
Cops3O88543 Gm10313-201ENSMUST00000095320 1002 ntBASIC13.29□□□□□ -0.28
Cops3O88543 Acot3-201ENSMUST00000021653 3431 ntAPPRIS P3 TSL 1 (best) BASIC13.29□□□□□ -0.28
Cops3O88543 Prss36-201ENSMUST00000094026 3061 ntAPPRIS ALT2 TSL 5 BASIC13.29□□□□□ -0.28
Cops3O88543 Lcat-201ENSMUST00000038896 1342 ntAPPRIS P1 TSL 1 (best) BASIC13.29□□□□□ -0.28
Cops3O88543 AC122901.1-201ENSMUST00000214203 1790 ntBASIC13.29□□□□□ -0.28
Cops3O88543 Slc20a2-201ENSMUST00000067786 3566 ntAPPRIS P1 TSL 1 (best) BASIC13.29□□□□□ -0.28
Cops3O88543 Zfp568-203ENSMUST00000148442 4005 ntAPPRIS P3 TSL 1 (best) BASIC13.29□□□□□ -0.28
Cops3O88543 Olfr718-ps1-203ENSMUST00000215102 4913 ntAPPRIS P5 TSL 5 BASIC13.29□□□□□ -0.28
Cops3O88543 Arid3a-203ENSMUST00000105377 4952 ntAPPRIS ALT2 TSL 1 (best) BASIC13.29□□□□□ -0.28
Cops3O88543 Scn4b-201ENSMUST00000060125 4982 ntAPPRIS P1 TSL 1 (best) BASIC13.29□□□□□ -0.28
Cops3O88543 Cyb5r1-201ENSMUST00000027726 1837 ntAPPRIS P1 TSL 1 (best) BASIC13.29□□□□□ -0.28
Cops3O88543 Flot1-209ENSMUST00000174080 1383 ntTSL 5 BASIC13.29□□□□□ -0.28
Cops3O88543 Gm21451-201ENSMUST00000111062 2775 ntBASIC13.29□□□□□ -0.28
Cops3O88543 Ptprs-202ENSMUST00000086828 5608 ntTSL 1 (best) BASIC13.29□□□□□ -0.28
Cops3O88543 Tmod2-208ENSMUST00000215614 1921 ntAPPRIS P1 TSL 1 (best) BASIC13.29□□□□□ -0.28
Cops3O88543 Selenon-201ENSMUST00000060435 3445 ntAPPRIS P1 TSL 5 BASIC13.29□□□□□ -0.28
Cops3O88543 Rnf31-201ENSMUST00000019443 3485 ntAPPRIS P1 TSL 1 (best) BASIC13.29□□□□□ -0.28
Cops3O88543 Syp-201ENSMUST00000069520 2591 ntAPPRIS P1 TSL 1 (best) BASIC13.28□□□□□ -0.28
Cops3O88543 B4galt3-202ENSMUST00000111313 2098 ntAPPRIS P1 TSL 1 (best) BASIC13.28□□□□□ -0.28
Cops3O88543 Gatsl3-201ENSMUST00000020699 1574 ntAPPRIS P1 TSL 1 (best) BASIC13.28□□□□□ -0.28
Cops3O88543 Sesn1-201ENSMUST00000041438 2600 ntAPPRIS P3 TSL 1 (best) BASIC13.28□□□□□ -0.28
Cops3O88543 Col7a1-202ENSMUST00000112070 9250 ntAPPRIS P1 TSL 5 BASIC13.28□□□□□ -0.28
Cops3O88543 Wdr46-201ENSMUST00000025170 2227 ntAPPRIS P1 TSL 1 (best) BASIC13.28□□□□□ -0.28
Cops3O88543 Pde7b-205ENSMUST00000169404 1697 ntAPPRIS ALT2 TSL 5 BASIC13.28□□□□□ -0.28
Cops3O88543 Ankrd23-202ENSMUST00000193083 2277 ntTSL 1 (best) BASIC13.28□□□□□ -0.28
Cops3O88543 Irgc1-201ENSMUST00000080594 1737 ntAPPRIS P1 TSL 1 (best) BASIC13.28□□□□□ -0.28
Cops3O88543 Kif7-204ENSMUST00000184137 4093 ntAPPRIS P3 TSL 5 BASIC13.28□□□□□ -0.28
Cops3O88543 Cdcp1-201ENSMUST00000039229 5310 ntAPPRIS P1 TSL 1 (best) BASIC13.28□□□□□ -0.28
Cops3O88543 Tsku-206ENSMUST00000179780 2404 ntAPPRIS P1 TSL 1 (best) BASIC13.28□□□□□ -0.28
Cops3O88543 Leng9-201ENSMUST00000058358 2460 ntAPPRIS P1 BASIC13.28□□□□□ -0.28
Cops3O88543 Skap1-205ENSMUST00000107662 1861 ntTSL 1 (best) BASIC13.28□□□□□ -0.28
Cops3O88543 Irak1-206ENSMUST00000114354 3835 ntAPPRIS ALT2 TSL 1 (best) BASIC13.28□□□□□ -0.28
Cops3O88543 Gm11453-201ENSMUST00000117318 1007 ntBASIC13.28□□□□□ -0.28
Cops3O88543 Nrn1l-202ENSMUST00000118920 603 ntAPPRIS ALT2 TSL 1 (best) BASIC13.28□□□□□ -0.28
Cops3O88543 Tpm3-205ENSMUST00000121503 1139 ntAPPRIS P1 TSL 1 (best) BASIC13.28□□□□□ -0.28
Cops3O88543 Ascl2-202ENSMUST00000121862 814 ntAPPRIS ALT2 BASIC13.28□□□□□ -0.28
Cops3O88543 Gm13403-202ENSMUST00000134271 674 ntTSL 1 (best) BASIC13.28□□□□□ -0.28
Cops3O88543 Rbfox2-207ENSMUST00000227533 1041 ntBASIC13.28□□□□□ -0.28
Cops3O88543 Mzb1-201ENSMUST00000025211 905 ntAPPRIS P1 TSL 1 (best) BASIC13.28□□□□□ -0.28
Cops3O88543 Ppib-201ENSMUST00000034947 892 ntAPPRIS P1 TSL 1 (best) BASIC13.28□□□□□ -0.28
Cops3O88543 Rpp25l-201ENSMUST00000038434 856 ntAPPRIS P1 TSL 1 (best) BASIC13.28□□□□□ -0.28
Cops3O88543 Etfb-201ENSMUST00000004729 893 ntAPPRIS P1 TSL 1 (best) BASIC13.28□□□□□ -0.28
Cops3O88543 Insl6-201ENSMUST00000052380 708 ntAPPRIS P1 TSL 1 (best) BASIC13.28□□□□□ -0.28
Cops3O88543 Gm4262-201ENSMUST00000180624 1986 ntTSL 1 (best) BASIC13.28□□□□□ -0.28
Cops3O88543 Pmm1-201ENSMUST00000023112 1300 ntAPPRIS P1 TSL 1 (best) BASIC13.28□□□□□ -0.28
Cops3O88543 Ilf2-201ENSMUST00000001042 2027 ntAPPRIS P1 TSL 1 (best) BASIC13.28□□□□□ -0.28
Cops3O88543 Elmsan1-202ENSMUST00000110294 7156 ntAPPRIS P1 TSL 5 BASIC13.28□□□□□ -0.28
Cops3O88543 Kctd3-201ENSMUST00000085678 3706 ntAPPRIS P1 TSL 1 (best) BASIC13.28□□□□□ -0.28
Cops3O88543 Fbxw7-204ENSMUST00000107679 4473 ntAPPRIS ALT1 TSL 1 (best) BASIC13.28□□□□□ -0.28
Cops3O88543 Fzd7-201ENSMUST00000114246 4532 ntAPPRIS P1 BASIC13.28□□□□□ -0.28
Cops3O88543 Iqcd-201ENSMUST00000069259 1577 ntAPPRIS ALT2 TSL 1 (best) BASIC13.28□□□□□ -0.28
Cops3O88543 Brix1-201ENSMUST00000022855 2664 ntAPPRIS P1 TSL 1 (best) BASIC13.27□□□□□ -0.28
Cops3O88543 Tpr-201ENSMUST00000119161 7480 ntAPPRIS ALT2 TSL 5 BASIC13.27□□□□□ -0.28
Retrieved 100 of 76,532 protein–RNA pairs in 53.9 ms