Protein–RNA interactions for Protein: O88384

Vti1b, Vesicle transport through interaction with t-SNAREs homolog 1B, mousemouse

Predictions only

Length 232 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Vti1bO88384 Frmpd4-204ENSMUST00000112149 8456 ntAPPRIS ALT2 TSL 5 BASIC14.16□□□□□ -0.14
Vti1bO88384 Gm3928-201ENSMUST00000121141 1307 ntBASIC14.15□□□□□ -0.14
Vti1bO88384 4930528D03Rik-201ENSMUST00000181528 1339 ntTSL 1 (best) BASIC14.15□□□□□ -0.14
Vti1bO88384 Ccdc68-201ENSMUST00000043929 1618 ntAPPRIS P2 TSL 1 (best) BASIC14.15□□□□□ -0.14
Vti1bO88384 Agpat1-208ENSMUST00000174595 1911 ntAPPRIS P1 TSL 5 BASIC14.15□□□□□ -0.14
Vti1bO88384 Nucb1-201ENSMUST00000033096 2111 ntAPPRIS ALT2 TSL 5 BASIC14.15□□□□□ -0.14
Vti1bO88384 Chfr-207ENSMUST00000198633 2623 ntAPPRIS ALT2 TSL 1 (best) BASIC14.15□□□□□ -0.14
Vti1bO88384 Fam109b-201ENSMUST00000050349 2745 ntAPPRIS P1 TSL 1 (best) BASIC14.15□□□□□ -0.14
Vti1bO88384 Fgd1-201ENSMUST00000026296 4001 ntAPPRIS P1 TSL 1 (best) BASIC14.15□□□□□ -0.14
Vti1bO88384 Cdkn2aip-202ENSMUST00000212175 3393 ntAPPRIS P2 TSL 1 (best) BASIC14.15□□□□□ -0.14
Vti1bO88384 Men1-206ENSMUST00000113502 2652 ntTSL 1 (best) BASIC14.15□□□□□ -0.14
Vti1bO88384 Palm3-201ENSMUST00000055077 2452 ntAPPRIS P1 TSL 1 (best) BASIC14.15□□□□□ -0.14
Vti1bO88384 Kif3a-201ENSMUST00000057330 2290 ntTSL 1 (best) BASIC14.15□□□□□ -0.14
Vti1bO88384 Wbscr25-202ENSMUST00000148729 2075 ntTSL 1 (best) BASIC14.15□□□□□ -0.14
Vti1bO88384 Taf2-201ENSMUST00000041733 5031 ntAPPRIS P1 TSL 1 (best) BASIC14.15□□□□□ -0.14
Vti1bO88384 Pitx2-206ENSMUST00000174623 1493 ntTSL 2 BASIC14.15□□□□□ -0.14
Vti1bO88384 Ndufa5-202ENSMUST00000118558 315 ntTSL 2 BASIC14.15□□□□□ -0.14
Vti1bO88384 BC028777-201ENSMUST00000137883 985 ntTSL 1 (best) BASIC14.15□□□□□ -0.14
Vti1bO88384 Gzmm-201ENSMUST00000020549 1287 ntAPPRIS P1 TSL 1 (best) BASIC14.15□□□□□ -0.14
Vti1bO88384 AC161829.1-201ENSMUST00000220298 281 ntBASIC14.15□□□□□ -0.14
Vti1bO88384 AC158538.2-201ENSMUST00000225455 906 ntBASIC14.15□□□□□ -0.14
Vti1bO88384 Mrpl17-201ENSMUST00000033170 1028 ntTSL 1 (best) BASIC14.15□□□□□ -0.14
Vti1bO88384 Sf3b4-201ENSMUST00000076372 1915 ntAPPRIS P1 TSL 1 (best) BASIC14.15□□□□□ -0.14
Vti1bO88384 Serinc5-201ENSMUST00000049488 5366 ntAPPRIS P1 TSL 1 (best) BASIC14.15□□□□□ -0.14
Vti1bO88384 Dab1-203ENSMUST00000106830 5278 ntAPPRIS P1 TSL 1 (best) BASIC14.15□□□□□ -0.14
Vti1bO88384 Slc33a1-203ENSMUST00000161659 2554 ntAPPRIS P1 TSL 1 (best) BASIC14.15□□□□□ -0.14
Vti1bO88384 Pqlc2-201ENSMUST00000053862 1532 ntAPPRIS P2 TSL 1 (best) BASIC14.15□□□□□ -0.14
Vti1bO88384 Glyr1-202ENSMUST00000115844 3348 ntAPPRIS P1 TSL 1 (best) BASIC14.15□□□□□ -0.14
Vti1bO88384 Glyr1-201ENSMUST00000023189 3330 ntTSL 1 (best) BASIC14.15□□□□□ -0.14
Vti1bO88384 Papd5-203ENSMUST00000119033 4624 ntAPPRIS P1 TSL 1 (best) BASIC14.14□□□□□ -0.15
Vti1bO88384 Nupl2-201ENSMUST00000049887 2914 ntAPPRIS P1 TSL 1 (best) BASIC14.14□□□□□ -0.15
Vti1bO88384 Kctd3-201ENSMUST00000085678 3706 ntAPPRIS P1 TSL 1 (best) BASIC14.14□□□□□ -0.15
Vti1bO88384 Tmem82-201ENSMUST00000053263 1671 ntAPPRIS P1 TSL 1 (best) BASIC14.14□□□□□ -0.15
Vti1bO88384 Ccdc157-201ENSMUST00000093381 5015 ntAPPRIS ALT2 TSL 1 (best) BASIC14.14□□□□□ -0.15
Vti1bO88384 Sema3b-202ENSMUST00000102529 2875 ntAPPRIS P1 TSL 1 (best) BASIC14.14□□□□□ -0.15
Vti1bO88384 Etl4-207ENSMUST00000114610 2863 ntAPPRIS ALT2 TSL 1 (best) BASIC14.14□□□□□ -0.15
Vti1bO88384 Dmtn-202ENSMUST00000022695 4080 ntTSL 5 BASIC14.14□□□□□ -0.15
Vti1bO88384 Fbxo21-201ENSMUST00000035579 3883 ntAPPRIS ALT2 TSL 1 (best) BASIC14.14□□□□□ -0.15
Vti1bO88384 Zfp668-204ENSMUST00000106263 3132 ntAPPRIS P1 TSL 1 (best) BASIC14.14□□□□□ -0.15
Vti1bO88384 Capn1-201ENSMUST00000025891 3100 ntAPPRIS P1 TSL 1 (best) BASIC14.14□□□□□ -0.15
Vti1bO88384 Fam161a-205ENSMUST00000172602 1935 ntAPPRIS P1 TSL 2 BASIC14.14□□□□□ -0.15
Vti1bO88384 Ldha-210ENSMUST00000209984 1815 ntTSL 1 (best) BASIC14.14□□□□□ -0.15
Vti1bO88384 Gm14722-201ENSMUST00000118943 689 ntBASIC14.14□□□□□ -0.15
Vti1bO88384 Slbp-205ENSMUST00000139518 1191 ntAPPRIS ALT2 TSL 2 BASIC14.14□□□□□ -0.15
Vti1bO88384 Gm7230-201ENSMUST00000173026 815 ntBASIC14.14□□□□□ -0.15
Vti1bO88384 Yif1b-201ENSMUST00000032809 1111 ntAPPRIS P3 TSL 1 (best) BASIC14.14□□□□□ -0.15
Vti1bO88384 Dgcr6-202ENSMUST00000076757 894 ntTSL 5 BASIC14.14□□□□□ -0.15
Vti1bO88384 Wfdc6b-201ENSMUST00000094346 984 ntAPPRIS P1 TSL 1 (best) BASIC14.14□□□□□ -0.15
Vti1bO88384 Cdx2-201ENSMUST00000031650 2261 ntAPPRIS P1 TSL 1 (best) BASIC14.14□□□□□ -0.15
Vti1bO88384 Rragb-201ENSMUST00000039720 2258 ntAPPRIS P1 TSL 1 (best) BASIC14.14□□□□□ -0.15
Vti1bO88384 Arhgef33-202ENSMUST00000223878 3253 ntAPPRIS P1 BASIC14.14□□□□□ -0.15
Vti1bO88384 Arhgef33-201ENSMUST00000068175 3260 ntAPPRIS P1 TSL 5 BASIC14.14□□□□□ -0.15
Vti1bO88384 Ctnnb1-201ENSMUST00000007130 3623 ntAPPRIS P1 TSL 1 (best) BASIC14.14□□□□□ -0.15
Vti1bO88384 Nid2-201ENSMUST00000022340 4876 ntAPPRIS P1 TSL 1 (best) BASIC14.14□□□□□ -0.15
Vti1bO88384 Caprin2-201ENSMUST00000072324 2952 ntAPPRIS ALT2 TSL 5 BASIC14.14□□□□□ -0.15
Vti1bO88384 Ylpm1-201ENSMUST00000021670 7003 ntAPPRIS P2 TSL 5 BASIC14.14□□□□□ -0.15
Vti1bO88384 Gm16976-202ENSMUST00000127408 1515 ntTSL 1 (best) BASIC14.14□□□□□ -0.15
Vti1bO88384 Gm28496-202ENSMUST00000137742 2752 ntTSL 1 (best) BASIC14.14□□□□□ -0.15
Vti1bO88384 Grk6-207ENSMUST00000225925 2769 ntBASIC14.14□□□□□ -0.15
Vti1bO88384 Cct6b-202ENSMUST00000100722 1871 ntTSL 1 (best) BASIC14.14□□□□□ -0.15
Vti1bO88384 Zfp574-201ENSMUST00000053410 3145 ntAPPRIS P1 TSL 1 (best) BASIC14.14□□□□□ -0.15
Vti1bO88384 Olfr718-ps1-202ENSMUST00000213631 4737 ntAPPRIS P5 TSL 5 BASIC14.14□□□□□ -0.15
Vti1bO88384 Gm37500-201ENSMUST00000192059 1443 ntBASIC14.14□□□□□ -0.15
Vti1bO88384 Lman1-202ENSMUST00000120461 2208 ntAPPRIS P1 TSL 1 (best) BASIC14.14□□□□□ -0.15
Vti1bO88384 Gm10518-201ENSMUST00000097454 1301 ntAPPRIS P1 BASIC14.14□□□□□ -0.15
Vti1bO88384 Fam169b-202ENSMUST00000125685 2821 ntAPPRIS P2 TSL 1 (best) BASIC14.14□□□□□ -0.15
Vti1bO88384 Entpd5-204ENSMUST00000117286 1691 ntAPPRIS P1 TSL 1 (best) BASIC14.14□□□□□ -0.15
Vti1bO88384 Rnaseh2a-203ENSMUST00000109738 2044 ntAPPRIS P1 TSL 1 (best) BASIC14.14□□□□□ -0.15
Vti1bO88384 Top3b-201ENSMUST00000023465 3073 ntAPPRIS P1 TSL 1 (best) BASIC14.13□□□□□ -0.15
Vti1bO88384 Sema4b-204ENSMUST00000205822 3760 ntAPPRIS P1 TSL 1 (best) BASIC14.13□□□□□ -0.15
Vti1bO88384 Foxp1-208ENSMUST00000113329 1926 ntTSL 1 (best) BASIC14.13□□□□□ -0.15
Vti1bO88384 Nde1-201ENSMUST00000023359 2287 ntAPPRIS P1 TSL 1 (best) BASIC14.13□□□□□ -0.15
Vti1bO88384 Reep4-201ENSMUST00000047218 1565 ntAPPRIS P1 TSL 1 (best) BASIC14.13□□□□□ -0.15
Vti1bO88384 Gjb1-201ENSMUST00000052130 1565 ntAPPRIS P1 TSL 1 (best) BASIC14.13□□□□□ -0.15
Vti1bO88384 Mkrn3-201ENSMUST00000094340 2547 ntAPPRIS P1 BASIC14.13□□□□□ -0.15
Vti1bO88384 Rnf34-201ENSMUST00000031434 4440 ntAPPRIS P1 TSL 1 (best) BASIC14.13□□□□□ -0.15
Vti1bO88384 Mfsd6l-201ENSMUST00000053211 2060 ntAPPRIS P1 BASIC14.13□□□□□ -0.15
Vti1bO88384 Acly-202ENSMUST00000107385 1741 ntTSL 1 (best) BASIC14.13□□□□□ -0.15
Vti1bO88384 Gm26534-201ENSMUST00000181687 1724 ntTSL 1 (best) BASIC14.13□□□□□ -0.15
Vti1bO88384 Hbb-bh0-201ENSMUST00000124800 129 ntBASIC14.13□□□□□ -0.15
Vti1bO88384 Ubl5-204ENSMUST00000160682 489 ntAPPRIS P1 TSL 5 BASIC14.13□□□□□ -0.15
Vti1bO88384 AC159093.1-201ENSMUST00000227779 380 ntBASIC14.13□□□□□ -0.15
Vti1bO88384 Psmb4-201ENSMUST00000005923 1183 ntAPPRIS P1 TSL 1 (best) BASIC14.13□□□□□ -0.15
Vti1bO88384 Miat-205ENSMUST00000182953 9163 ntTSL 1 (best) BASIC14.13□□□□□ -0.15
Vti1bO88384 Chtf18-201ENSMUST00000048054 3214 ntAPPRIS P1 TSL 1 (best) BASIC14.13□□□□□ -0.15
Vti1bO88384 Glb1-201ENSMUST00000063042 2396 ntAPPRIS P1 TSL 1 (best) BASIC14.13□□□□□ -0.15
Vti1bO88384 Gpr88-201ENSMUST00000090473 3469 ntAPPRIS P1 TSL 1 (best) BASIC14.13□□□□□ -0.15
Vti1bO88384 Txndc11-203ENSMUST00000118679 3523 ntTSL 1 (best) BASIC14.13□□□□□ -0.15
Vti1bO88384 Ebag9-202ENSMUST00000226165 1931 ntAPPRIS P1 BASIC14.13□□□□□ -0.15
Vti1bO88384 Ece2-201ENSMUST00000003898 3152 ntAPPRIS P3 TSL 1 (best) BASIC14.13□□□□□ -0.15
Vti1bO88384 Slc4a2-201ENSMUST00000080067 4179 ntAPPRIS P2 TSL 1 (best) BASIC14.13□□□□□ -0.15
Vti1bO88384 Wnk1-203ENSMUST00000088644 11330 ntAPPRIS ALT2 TSL 5 BASIC14.13□□□□□ -0.15
Vti1bO88384 Oas1b-203ENSMUST00000183291 1837 ntAPPRIS P1 TSL 1 (best) BASIC14.13□□□□□ -0.15
Vti1bO88384 4930459C07Rik-202ENSMUST00000219638 1805 ntTSL 5 BASIC14.13□□□□□ -0.15
Vti1bO88384 Lrrc25-201ENSMUST00000052437 1313 ntAPPRIS P1 TSL 1 (best) BASIC14.13□□□□□ -0.15
Vti1bO88384 Tspan15-201ENSMUST00000047883 3638 ntAPPRIS P1 TSL 1 (best) BASIC14.13□□□□□ -0.15
Vti1bO88384 Wwp2-205ENSMUST00000212543 1996 ntTSL 1 (best) BASIC14.13□□□□□ -0.15
Vti1bO88384 Bst1-201ENSMUST00000101237 2856 ntAPPRIS P1 TSL 1 (best) BASIC14.12□□□□□ -0.15
Vti1bO88384 Ralgapb-203ENSMUST00000109486 8383 ntAPPRIS P2 TSL 1 (best) BASIC14.12□□□□□ -0.15
Vti1bO88384 Gm32369-201ENSMUST00000222630 1467 ntTSL 5 BASIC14.12□□□□□ -0.15
Retrieved 100 of 76,532 protein–RNA pairs in 69.6 ms