Protein–RNA interactions for Protein: O55055

Trdmt1, tRNA (cytosine(38)-C(5))-methyltransferase, mousemouse

Predictions only

Length 415 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trdmt1O55055 Rnd1-202ENSMUST00000109149 1034 ntTSL 1 (best) BASIC16.24■□□□□ 0.19
Trdmt1O55055 Gm11899-201ENSMUST00000142373 745 ntTSL 1 (best) BASIC16.24■□□□□ 0.19
Trdmt1O55055 0610005C13Rik-201ENSMUST00000209416 856 ntTSL 5 BASIC16.24■□□□□ 0.19
Trdmt1O55055 Gm7390-201ENSMUST00000212452 1216 ntBASIC16.24■□□□□ 0.19
Trdmt1O55055 2610528J11Rik-201ENSMUST00000030261 958 ntAPPRIS P1 TSL 1 (best) BASIC16.24■□□□□ 0.19
Trdmt1O55055 Srd5a2-201ENSMUST00000043458 854 ntAPPRIS P1 TSL 1 (best) BASIC16.24■□□□□ 0.19
Trdmt1O55055 Lrif1-202ENSMUST00000098751 929 ntTSL 2 BASIC16.24■□□□□ 0.19
Trdmt1O55055 Parg-201ENSMUST00000022470 4413 ntAPPRIS P2 TSL 1 (best) BASIC16.24■□□□□ 0.19
Trdmt1O55055 Antxr2-201ENSMUST00000031281 5656 ntAPPRIS P2 TSL 1 (best) BASIC16.24■□□□□ 0.19
Trdmt1O55055 Gpx3-201ENSMUST00000082430 1594 ntAPPRIS P1 TSL 1 (best) BASIC16.24■□□□□ 0.19
Trdmt1O55055 Hnrnpa3-202ENSMUST00000111961 1734 ntAPPRIS ALT2 TSL 1 (best) BASIC16.24■□□□□ 0.19
Trdmt1O55055 Gm17501-201ENSMUST00000181247 1700 ntTSL 1 (best) BASIC16.24■□□□□ 0.19
Trdmt1O55055 Cstf2-201ENSMUST00000033609 4502 ntAPPRIS P1 TSL 1 (best) BASIC16.24■□□□□ 0.19
Trdmt1O55055 Polr3d-202ENSMUST00000180358 2032 ntAPPRIS P1 TSL 1 (best) BASIC16.24■□□□□ 0.19
Trdmt1O55055 Nbea-201ENSMUST00000029374 10986 ntAPPRIS P1 TSL 5 BASIC16.24■□□□□ 0.19
Trdmt1O55055 Pex5l-206ENSMUST00000108226 2632 ntAPPRIS ALT2 TSL 1 (best) BASIC16.24■□□□□ 0.19
Trdmt1O55055 Wdr41-201ENSMUST00000056512 3063 ntAPPRIS P1 TSL 1 (best) BASIC16.24■□□□□ 0.19
Trdmt1O55055 Wac-201ENSMUST00000074919 3070 ntTSL 1 (best) BASIC16.24■□□□□ 0.19
Trdmt1O55055 Rasa2-201ENSMUST00000034984 5813 ntAPPRIS P1 TSL 1 (best) BASIC16.24■□□□□ 0.19
Trdmt1O55055 Pde7b-206ENSMUST00000170265 1380 ntAPPRIS ALT2 TSL 5 BASIC16.24■□□□□ 0.19
Trdmt1O55055 Gm21009-201ENSMUST00000197169 1669 ntBASIC16.24■□□□□ 0.19
Trdmt1O55055 Tmtc4-201ENSMUST00000037726 3416 ntAPPRIS P1 TSL 1 (best) BASIC16.23■□□□□ 0.19
Trdmt1O55055 Gm45351-201ENSMUST00000210683 2545 ntTSL 1 (best) BASIC16.23■□□□□ 0.19
Trdmt1O55055 Zfc3h1-201ENSMUST00000036044 6957 ntAPPRIS P1 TSL 1 (best) BASIC16.23■□□□□ 0.19
Trdmt1O55055 Fam222b-202ENSMUST00000100782 2473 ntTSL 1 (best) BASIC16.23■□□□□ 0.19
Trdmt1O55055 Sdc1-205ENSMUST00000171158 2311 ntAPPRIS P1 TSL 1 (best) BASIC16.23■□□□□ 0.19
Trdmt1O55055 Gm42901-201ENSMUST00000197735 3171 ntBASIC16.23■□□□□ 0.19
Trdmt1O55055 Sorcs3-201ENSMUST00000078880 5634 ntAPPRIS P1 TSL 1 (best) BASIC16.23■□□□□ 0.19
Trdmt1O55055 Flvcr1-201ENSMUST00000085635 4040 ntAPPRIS P1 TSL 1 (best) BASIC16.23■□□□□ 0.19
Trdmt1O55055 Mxd4-201ENSMUST00000042701 3872 ntAPPRIS P1 TSL 1 (best) BASIC16.23■□□□□ 0.19
Trdmt1O55055 Synrg-207ENSMUST00000183456 3990 ntAPPRIS ALT2 TSL 5 BASIC16.23■□□□□ 0.19
Trdmt1O55055 B230359F08Rik-201ENSMUST00000103671 426 ntAPPRIS P1 BASIC16.23■□□□□ 0.19
Trdmt1O55055 Apoo-203ENSMUST00000113897 1218 ntTSL 1 (best) BASIC16.23■□□□□ 0.19
Trdmt1O55055 Gm16091-201ENSMUST00000156664 963 ntTSL 1 (best) BASIC16.23■□□□□ 0.19
Trdmt1O55055 Gm15939-201ENSMUST00000160756 2147 ntTSL 5 BASIC16.23■□□□□ 0.19
Trdmt1O55055 BC023719-201ENSMUST00000174728 978 ntTSL 1 (best) BASIC16.23■□□□□ 0.19
Trdmt1O55055 Lamtor1-202ENSMUST00000193465 661 ntTSL 5 BASIC16.23■□□□□ 0.19
Trdmt1O55055 Coa6-202ENSMUST00000211868 564 ntAPPRIS P1 TSL 1 (best) BASIC16.23■□□□□ 0.19
Trdmt1O55055 Tspan3-203ENSMUST00000215906 842 ntTSL 3 BASIC16.23■□□□□ 0.19
Trdmt1O55055 Cela1-201ENSMUST00000023775 1103 ntAPPRIS P1 TSL 1 (best) BASIC16.23■□□□□ 0.19
Trdmt1O55055 Rps15-201ENSMUST00000062674 572 ntTSL 1 (best) BASIC16.23■□□□□ 0.19
Trdmt1O55055 Prtn3-201ENSMUST00000006679 1025 ntAPPRIS P1 TSL 1 (best) BASIC16.23■□□□□ 0.19
Trdmt1O55055 Ddx50-201ENSMUST00000020270 2535 ntAPPRIS P1 TSL 1 (best) BASIC16.23■□□□□ 0.19
Trdmt1O55055 Dock3-201ENSMUST00000044532 9063 ntAPPRIS P1 TSL 2 BASIC16.23■□□□□ 0.19
Trdmt1O55055 Zfp800-202ENSMUST00000115320 4311 ntAPPRIS P1 TSL 1 (best) BASIC16.23■□□□□ 0.19
Trdmt1O55055 Add1-204ENSMUST00000114338 4007 ntAPPRIS ALT2 TSL 1 (best) BASIC16.23■□□□□ 0.19
Trdmt1O55055 Ginm1-204ENSMUST00000124838 1525 ntAPPRIS ALT2 TSL 1 (best) BASIC16.23■□□□□ 0.19
Trdmt1O55055 Msl1-201ENSMUST00000037915 4593 ntAPPRIS P2 TSL 1 (best) BASIC16.23■□□□□ 0.19
Trdmt1O55055 Islr2-204ENSMUST00000165276 3989 ntAPPRIS P3 TSL 2 BASIC16.23■□□□□ 0.19
Trdmt1O55055 Ret-202ENSMUST00000088790 4497 ntAPPRIS ALT2 TSL 1 (best) BASIC16.23■□□□□ 0.19
Trdmt1O55055 Galnt13-204ENSMUST00000112636 7530 ntAPPRIS P1 TSL 1 (best) BASIC16.23■□□□□ 0.19
Trdmt1O55055 Usp43-202ENSMUST00000108677 4447 ntAPPRIS ALT2 TSL 1 (best) BASIC16.22■□□□□ 0.19
Trdmt1O55055 Ldb3-207ENSMUST00000227819 1499 ntBASIC16.22■□□□□ 0.19
Trdmt1O55055 Taf1a-201ENSMUST00000097043 1472 ntAPPRIS P1 TSL 5 BASIC16.22■□□□□ 0.19
Trdmt1O55055 Insig1-201ENSMUST00000059155 2697 ntAPPRIS P1 TSL 1 (best) BASIC16.22■□□□□ 0.19
Trdmt1O55055 Acbd5-203ENSMUST00000114526 3725 ntAPPRIS P4 TSL 1 (best) BASIC16.22■□□□□ 0.19
Trdmt1O55055 Sectm1a-203ENSMUST00000106119 1302 ntAPPRIS ALT2 TSL 1 (best) BASIC16.22■□□□□ 0.19
Trdmt1O55055 Tef-201ENSMUST00000023024 4079 ntTSL 1 (best) BASIC16.22■□□□□ 0.19
Trdmt1O55055 Adgrb2-205ENSMUST00000106017 5104 ntAPPRIS P3 TSL 1 (best) BASIC16.22■□□□□ 0.19
Trdmt1O55055 Palm3-201ENSMUST00000055077 2452 ntAPPRIS P1 TSL 1 (best) BASIC16.22■□□□□ 0.19
Trdmt1O55055 Tex261-201ENSMUST00000014892 2984 ntAPPRIS P1 TSL 1 (best) BASIC16.22■□□□□ 0.19
Trdmt1O55055 Rsrc1-205ENSMUST00000161726 3213 ntAPPRIS P2 TSL 1 (best) BASIC16.22■□□□□ 0.19
Trdmt1O55055 Rdm1-201ENSMUST00000010506 1124 ntAPPRIS P1 TSL 1 (best) BASIC16.22■□□□□ 0.19
Trdmt1O55055 Gm6745-201ENSMUST00000199216 526 ntBASIC16.22■□□□□ 0.19
Trdmt1O55055 Gm30437-201ENSMUST00000206086 1201 ntBASIC16.22■□□□□ 0.19
Trdmt1O55055 0610005C13Rik-209ENSMUST00000211209 974 ntTSL 2 BASIC16.22■□□□□ 0.19
Trdmt1O55055 Ppcdc-205ENSMUST00000214144 724 ntTSL 1 (best) BASIC16.22■□□□□ 0.19
Trdmt1O55055 AC156016.3-201ENSMUST00000228623 344 ntBASIC16.22■□□□□ 0.19
Trdmt1O55055 Nup37-201ENSMUST00000052355 1267 ntAPPRIS P1 TSL 1 (best) BASIC16.22■□□□□ 0.19
Trdmt1O55055 Gm6180-201ENSMUST00000065243 498 ntBASIC16.22■□□□□ 0.19
Trdmt1O55055 Cdcp1-201ENSMUST00000039229 5310 ntAPPRIS P1 TSL 1 (best) BASIC16.22■□□□□ 0.19
Trdmt1O55055 Pcbp3-201ENSMUST00000001148 2013 ntAPPRIS P3 TSL 1 (best) BASIC16.22■□□□□ 0.19
Trdmt1O55055 Tatdn2-205ENSMUST00000204753 2645 ntAPPRIS ALT2 TSL 1 (best) BASIC16.22■□□□□ 0.19
Trdmt1O55055 Tmem170-201ENSMUST00000034431 3878 ntAPPRIS P1 TSL 1 (best) BASIC16.22■□□□□ 0.19
Trdmt1O55055 Mettl7a3-201ENSMUST00000075420 1618 ntAPPRIS P1 TSL 1 (best) BASIC16.22■□□□□ 0.19
Trdmt1O55055 Vdac3-201ENSMUST00000009036 1354 ntAPPRIS P2 TSL 1 (best) BASIC16.22■□□□□ 0.19
Trdmt1O55055 Fa2h-201ENSMUST00000038475 2492 ntAPPRIS P1 TSL 1 (best) BASIC16.22■□□□□ 0.19
Trdmt1O55055 Sacs-204ENSMUST00000121091 4581 ntAPPRIS ALT2 TSL 1 (best) BASIC16.22■□□□□ 0.19
Trdmt1O55055 Tmem248-202ENSMUST00000111298 3570 ntAPPRIS P1 TSL 1 (best) BASIC16.22■□□□□ 0.19
Trdmt1O55055 Cpd-201ENSMUST00000021201 7946 ntAPPRIS P1 TSL 1 (best) BASIC16.22■□□□□ 0.19
Trdmt1O55055 Taf5-201ENSMUST00000026027 3258 ntAPPRIS P1 TSL 1 (best) BASIC16.21■□□□□ 0.19
Trdmt1O55055 Uhmk1-201ENSMUST00000027979 7864 ntAPPRIS P1 TSL 1 (best) BASIC16.21■□□□□ 0.19
Trdmt1O55055 Arpc4-203ENSMUST00000203578 1323 ntTSL 1 (best) BASIC16.21■□□□□ 0.19
Trdmt1O55055 Ebag9-202ENSMUST00000226165 1931 ntAPPRIS P1 BASIC16.21■□□□□ 0.19
Trdmt1O55055 Gm26889-201ENSMUST00000181523 2252 ntTSL 5 BASIC16.21■□□□□ 0.19
Trdmt1O55055 Dbndd1-201ENSMUST00000176155 1677 ntAPPRIS P1 TSL 1 (best) BASIC16.21■□□□□ 0.19
Trdmt1O55055 Ints8-203ENSMUST00000108319 3220 ntAPPRIS P1 TSL 1 (best) BASIC16.21■□□□□ 0.19
Trdmt1O55055 Arsi-201ENSMUST00000040359 2975 ntAPPRIS P1 TSL 1 (best) BASIC16.21■□□□□ 0.19
Trdmt1O55055 A830009L08Rik-201ENSMUST00000181054 2807 ntTSL 1 (best) BASIC16.21■□□□□ 0.19
Trdmt1O55055 Gm39244-202ENSMUST00000210837 1857 ntTSL 5 BASIC16.21■□□□□ 0.19
Trdmt1O55055 Ilvbl-209ENSMUST00000218885 2233 ntAPPRIS P1 TSL 1 (best) BASIC16.21■□□□□ 0.19
Trdmt1O55055 Fut7-203ENSMUST00000114278 1990 ntAPPRIS P3 TSL 1 (best) BASIC16.21■□□□□ 0.19
Trdmt1O55055 Fut7-201ENSMUST00000041654 1970 ntAPPRIS P3 TSL 5 BASIC16.21■□□□□ 0.19
Trdmt1O55055 Gm11555-202ENSMUST00000104929 638 ntAPPRIS P1 BASIC16.21■□□□□ 0.19
Trdmt1O55055 Arfrp1-202ENSMUST00000108808 1133 ntAPPRIS P1 TSL 1 (best) BASIC16.21■□□□□ 0.19
Trdmt1O55055 Akirin1-ps-201ENSMUST00000119676 458 ntBASIC16.21■□□□□ 0.19
Trdmt1O55055 Gm7820-201ENSMUST00000121012 1052 ntBASIC16.21■□□□□ 0.19
Trdmt1O55055 1600025M17Rik-202ENSMUST00000151426 547 ntTSL 1 (best) BASIC16.21■□□□□ 0.19
Trdmt1O55055 Gm12446-202ENSMUST00000152069 713 ntTSL 2 BASIC16.21■□□□□ 0.19
Trdmt1O55055 Gm12352-201ENSMUST00000154452 760 ntTSL 1 (best) BASIC16.21■□□□□ 0.19
Retrieved 100 of 76,532 protein–RNA pairs in 33.9 ms