Protein–RNA interactions for Protein: O55017

Cacna1b, Voltage-dependent N-type calcium channel subunit alpha-1B, mousemouse

Predictions only

Length 2,327 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Cacna1bO55017 Gm29109-201ENSMUST00000185895 696 ntBASIC14.27□□□□□ -0.12
Cacna1bO55017 Gm21896-201ENSMUST00000186520 696 ntBASIC14.27□□□□□ -0.12
Cacna1bO55017 Gm21873-201ENSMUST00000186728 696 ntBASIC14.27□□□□□ -0.12
Cacna1bO55017 Gm21794-201ENSMUST00000187056 696 ntBASIC14.27□□□□□ -0.12
Cacna1bO55017 Gm21880-201ENSMUST00000187275 696 ntBASIC14.27□□□□□ -0.12
Cacna1bO55017 Gm21826-201ENSMUST00000187451 696 ntBASIC14.27□□□□□ -0.12
Cacna1bO55017 Gm21198-201ENSMUST00000188393 696 ntBASIC14.27□□□□□ -0.12
Cacna1bO55017 Gm21749-201ENSMUST00000189343 696 ntBASIC14.27□□□□□ -0.12
Cacna1bO55017 Gm21901-201ENSMUST00000189568 696 ntBASIC14.27□□□□□ -0.12
Cacna1bO55017 Gm29424-201ENSMUST00000189716 696 ntBASIC14.27□□□□□ -0.12
Cacna1bO55017 Gm28599-201ENSMUST00000189838 694 ntBASIC14.27□□□□□ -0.12
Cacna1bO55017 Gm21867-201ENSMUST00000189917 696 ntBASIC14.27□□□□□ -0.12
Cacna1bO55017 Gm29269-201ENSMUST00000190087 696 ntBASIC14.27□□□□□ -0.12
Cacna1bO55017 Gm21722-201ENSMUST00000190153 696 ntBASIC14.27□□□□□ -0.12
Cacna1bO55017 Gm28423-201ENSMUST00000190701 696 ntBASIC14.27□□□□□ -0.12
Cacna1bO55017 Gm21899-201ENSMUST00000190745 696 ntBASIC14.27□□□□□ -0.12
Cacna1bO55017 Gm21910-201ENSMUST00000191163 696 ntBASIC14.27□□□□□ -0.12
Cacna1bO55017 Gm21849-201ENSMUST00000191571 696 ntBASIC14.27□□□□□ -0.12
Cacna1bO55017 Gm28678-201ENSMUST00000191593 696 ntBASIC14.27□□□□□ -0.12
Cacna1bO55017 Gm20910-201ENSMUST00000193268 696 ntBASIC14.27□□□□□ -0.12
Cacna1bO55017 Gm21871-201ENSMUST00000194621 696 ntBASIC14.27□□□□□ -0.12
Cacna1bO55017 Gm7390-201ENSMUST00000212452 1216 ntBASIC14.27□□□□□ -0.12
Cacna1bO55017 Sh3bgrl3-201ENSMUST00000030651 743 ntAPPRIS P1 TSL 1 (best) BASIC14.27□□□□□ -0.12
Cacna1bO55017 Tgif2-ps2-201ENSMUST00000061746 711 ntBASIC14.27□□□□□ -0.12
Cacna1bO55017 Kif21b-201ENSMUST00000075164 9115 ntAPPRIS P1 TSL 2 BASIC14.27□□□□□ -0.12
Cacna1bO55017 Htr3a-202ENSMUST00000217289 1987 ntAPPRIS ALT2 TSL 1 (best) BASIC14.27□□□□□ -0.12
Cacna1bO55017 Rab11fip5-202ENSMUST00000204087 6119 ntAPPRIS ALT2 TSL 1 (best) BASIC14.27□□□□□ -0.12
Cacna1bO55017 Rab17-204ENSMUST00000131428 1557 ntAPPRIS P1 TSL 1 (best) BASIC14.27□□□□□ -0.12
Cacna1bO55017 Samm50-201ENSMUST00000023071 1673 ntAPPRIS P1 TSL 1 (best) BASIC14.27□□□□□ -0.12
Cacna1bO55017 Sik3-204ENSMUST00000126865 6287 ntAPPRIS P1 TSL 1 (best) BASIC14.27□□□□□ -0.12
Cacna1bO55017 Sacm1l-201ENSMUST00000026270 3558 ntAPPRIS P1 TSL 1 (best) BASIC14.27□□□□□ -0.13
Cacna1bO55017 Ube2j2-206ENSMUST00000118192 922 ntTSL 5 BASIC14.27□□□□□ -0.13
Cacna1bO55017 Baiap2l2-205ENSMUST00000170955 1058 ntTSL 1 (best) BASIC14.27□□□□□ -0.13
Cacna1bO55017 Ip6k2-210ENSMUST00000194875 748 ntTSL 2 BASIC14.27□□□□□ -0.13
Cacna1bO55017 Disc1-205ENSMUST00000117658 2671 ntAPPRIS P3 TSL 1 (best) BASIC14.27□□□□□ -0.13
Cacna1bO55017 Crym-201ENSMUST00000033198 1383 ntAPPRIS P1 TSL 1 (best) BASIC14.27□□□□□ -0.13
Cacna1bO55017 Npdc1-202ENSMUST00000071442 1485 ntAPPRIS P2 TSL 1 (best) BASIC14.27□□□□□ -0.13
Cacna1bO55017 Palb2-201ENSMUST00000063587 1553 ntAPPRIS ALT2 TSL 1 (best) BASIC14.27□□□□□ -0.13
Cacna1bO55017 Fbxl19-207ENSMUST00000206893 3449 ntAPPRIS ALT2 TSL 5 BASIC14.27□□□□□ -0.13
Cacna1bO55017 Pds5b-208ENSMUST00000202170 6598 ntAPPRIS ALT2 TSL 5 BASIC14.27□□□□□ -0.13
Cacna1bO55017 Aste1-202ENSMUST00000123807 2349 ntAPPRIS ALT2 TSL 2 BASIC14.27□□□□□ -0.13
Cacna1bO55017 Bnip2-201ENSMUST00000034754 2464 ntAPPRIS P4 TSL 1 (best) BASIC14.27□□□□□ -0.13
Cacna1bO55017 Tmem260-201ENSMUST00000111735 5485 ntAPPRIS P3 TSL 1 (best) BASIC14.26□□□□□ -0.13
Cacna1bO55017 Ccdc88b-201ENSMUST00000113440 4959 ntAPPRIS P1 TSL 1 (best) BASIC14.26□□□□□ -0.13
Cacna1bO55017 Dnase1l1-203ENSMUST00000114189 755 ntTSL 3 BASIC14.26□□□□□ -0.13
Cacna1bO55017 Vps29-204ENSMUST00000118830 1014 ntAPPRIS ALT1 TSL 1 (best) BASIC14.26□□□□□ -0.13
Cacna1bO55017 Gm11425-201ENSMUST00000119608 498 ntBASIC14.26□□□□□ -0.13
Cacna1bO55017 Gm9115-201ENSMUST00000120192 1348 ntBASIC14.26□□□□□ -0.13
Cacna1bO55017 H2afb1-201ENSMUST00000122446 348 ntAPPRIS P1 BASIC14.26□□□□□ -0.13
Cacna1bO55017 Rpl12-203ENSMUST00000126610 1242 ntAPPRIS P1 TSL 1 (best) BASIC14.26□□□□□ -0.13
Cacna1bO55017 Ccni-201ENSMUST00000058550 2804 ntAPPRIS P1 TSL 1 (best) BASIC14.26□□□□□ -0.13
Cacna1bO55017 Gm9396-201ENSMUST00000076703 567 ntBASIC14.26□□□□□ -0.13
Cacna1bO55017 Dmkn-204ENSMUST00000085691 2007 ntAPPRIS P4 TSL 1 (best) BASIC14.26□□□□□ -0.13
Cacna1bO55017 Pde8b-202ENSMUST00000067082 2598 ntAPPRIS ALT2 TSL 5 BASIC14.26□□□□□ -0.13
Cacna1bO55017 Crat-202ENSMUST00000102854 2160 ntTSL 5 BASIC14.26□□□□□ -0.13
Cacna1bO55017 Elovl1-201ENSMUST00000006557 1811 ntAPPRIS P1 TSL 1 (best) BASIC14.26□□□□□ -0.13
Cacna1bO55017 Dhfr-201ENSMUST00000022218 5347 ntAPPRIS P1 TSL 1 (best) BASIC14.26□□□□□ -0.13
Cacna1bO55017 Fam185a-201ENSMUST00000056045 3027 ntAPPRIS P1 TSL 1 (best) BASIC14.26□□□□□ -0.13
Cacna1bO55017 Gbe1-203ENSMUST00000163832 2984 ntAPPRIS P5 TSL 5 BASIC14.26□□□□□ -0.13
Cacna1bO55017 Pxk-205ENSMUST00000225653 2765 ntAPPRIS P2 BASIC14.26□□□□□ -0.13
Cacna1bO55017 Gm43568-203ENSMUST00000199116 1270 ntTSL 1 (best) BASIC14.26□□□□□ -0.13
Cacna1bO55017 Atxn7-201ENSMUST00000022257 6853 ntAPPRIS P2 TSL 1 (best) BASIC14.26□□□□□ -0.13
Cacna1bO55017 Ifrd2-201ENSMUST00000010192 2056 ntAPPRIS P1 TSL 1 (best) BASIC14.26□□□□□ -0.13
Cacna1bO55017 Akap8l-201ENSMUST00000050214 2075 ntAPPRIS P1 TSL 1 (best) BASIC14.26□□□□□ -0.13
Cacna1bO55017 Ank1-203ENSMUST00000110688 7206 ntAPPRIS ALT2 TSL 1 (best) BASIC14.26□□□□□ -0.13
Cacna1bO55017 A530083I20Rik-203ENSMUST00000214426 1855 ntTSL 5 BASIC14.26□□□□□ -0.13
Cacna1bO55017 Ldb3-208ENSMUST00000228044 1883 ntAPPRIS ALT2 BASIC14.26□□□□□ -0.13
Cacna1bO55017 Acbd3-201ENSMUST00000027780 3471 ntAPPRIS P1 TSL 1 (best) BASIC14.26□□□□□ -0.13
Cacna1bO55017 Zfp568-203ENSMUST00000148442 4005 ntAPPRIS P3 TSL 1 (best) BASIC14.25□□□□□ -0.13
Cacna1bO55017 Dzip1-202ENSMUST00000047208 4476 ntAPPRIS P1 TSL 5 BASIC14.25□□□□□ -0.13
Cacna1bO55017 Slc46a3-202ENSMUST00000118527 2210 ntAPPRIS P1 TSL 1 (best) BASIC14.25□□□□□ -0.13
Cacna1bO55017 Cpne6-203ENSMUST00000165262 2178 ntAPPRIS ALT1 TSL 1 (best) BASIC14.25□□□□□ -0.13
Cacna1bO55017 Tmcc3-201ENSMUST00000065060 5530 ntAPPRIS P1 TSL 1 (best) BASIC14.25□□□□□ -0.13
Cacna1bO55017 Gnb2-209ENSMUST00000143495 1285 ntTSL 5 BASIC14.25□□□□□ -0.13
Cacna1bO55017 Fbxw4-204ENSMUST00000160018 931 ntTSL 3 BASIC14.25□□□□□ -0.13
Cacna1bO55017 Gm42196-201ENSMUST00000209618 730 ntTSL 5 BASIC14.25□□□□□ -0.13
Cacna1bO55017 Odf3l2-201ENSMUST00000095464 1248 ntAPPRIS P1 TSL 1 (best) BASIC14.25□□□□□ -0.13
Cacna1bO55017 Eif4h-201ENSMUST00000036125 2367 ntAPPRIS ALT1 TSL 1 (best) BASIC14.25□□□□□ -0.13
Cacna1bO55017 Hif3a-201ENSMUST00000037762 2206 ntAPPRIS P3 TSL 1 (best) BASIC14.25□□□□□ -0.13
Cacna1bO55017 Phf12-201ENSMUST00000049167 4410 ntAPPRIS P1 TSL 1 (best) BASIC14.25□□□□□ -0.13
Cacna1bO55017 Ggn-205ENSMUST00000209019 2148 ntAPPRIS ALT2 TSL 1 (best) BASIC14.25□□□□□ -0.13
Cacna1bO55017 Cyp46a1-201ENSMUST00000021684 2118 ntAPPRIS P1 TSL 1 (best) BASIC14.25□□□□□ -0.13
Cacna1bO55017 Stard7-201ENSMUST00000110374 1530 ntTSL 1 (best) BASIC14.25□□□□□ -0.13
Cacna1bO55017 Gss-201ENSMUST00000079691 1963 ntAPPRIS P1 TSL 1 (best) BASIC14.25□□□□□ -0.13
Cacna1bO55017 Rapsn-203ENSMUST00000111446 1458 ntTSL 1 (best) BASIC14.25□□□□□ -0.13
Cacna1bO55017 Ppp4r3a-202ENSMUST00000163095 4083 ntTSL 5 BASIC14.25□□□□□ -0.13
Cacna1bO55017 Zscan12-202ENSMUST00000099720 2182 ntAPPRIS P1 TSL 1 (best) BASIC14.25□□□□□ -0.13
Cacna1bO55017 Selenoh-202ENSMUST00000102647 654 ntAPPRIS P2 TSL 1 (best) BASIC14.25□□□□□ -0.13
Cacna1bO55017 Gm7820-201ENSMUST00000121012 1052 ntBASIC14.25□□□□□ -0.13
Cacna1bO55017 Gm11574-201ENSMUST00000139752 946 ntTSL 5 BASIC14.25□□□□□ -0.13
Cacna1bO55017 Mrps24-205ENSMUST00000154330 995 ntAPPRIS P1 TSL 1 (best) BASIC14.25□□□□□ -0.13
Cacna1bO55017 H2-Bl-210ENSMUST00000195833 829 ntTSL 1 (best) BASIC14.25□□□□□ -0.13
Cacna1bO55017 AC166349.1-201ENSMUST00000220866 695 ntBASIC14.25□□□□□ -0.13
Cacna1bO55017 Slc35g3-201ENSMUST00000102586 1618 ntAPPRIS P1 TSL 1 (best) BASIC14.25□□□□□ -0.13
Cacna1bO55017 Cox16-201ENSMUST00000002757 2007 ntAPPRIS P1 TSL 1 (best) BASIC14.25□□□□□ -0.13
Cacna1bO55017 Med26-201ENSMUST00000058534 2997 ntAPPRIS P1 TSL 1 (best) BASIC14.24□□□□□ -0.13
Cacna1bO55017 Sergef-201ENSMUST00000033127 1465 ntAPPRIS P1 TSL 1 (best) BASIC14.24□□□□□ -0.13
Cacna1bO55017 Gm4425-201ENSMUST00000172838 2857 ntTSL 2 BASIC14.24□□□□□ -0.13
Cacna1bO55017 Efcab14-204ENSMUST00000106525 2792 ntAPPRIS ALT2 TSL 1 (best) BASIC14.24□□□□□ -0.13
Cacna1bO55017 Gm17396-201ENSMUST00000172075 1655 ntTSL 1 (best) BASIC14.24□□□□□ -0.13
Retrieved 100 of 76,532 protein–RNA pairs in 48.1 ms