Protein–RNA interactions for Protein: O35627

Nr1i3, Nuclear receptor subfamily 1 group I member 3, mousemouse

Predictions only

Length 358 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Nr1i3O35627 Fam169b-202ENSMUST00000125685 2821 ntAPPRIS P2 TSL 1 (best) BASIC15.93■□□□□ 0.14
Nr1i3O35627 Rnf44-211ENSMUST00000134862 3797 ntTSL 5 BASIC15.93■□□□□ 0.14
Nr1i3O35627 Alg3-201ENSMUST00000045918 1451 ntAPPRIS P1 TSL 1 (best) BASIC15.93■□□□□ 0.14
Nr1i3O35627 Gm13036-201ENSMUST00000117799 748 ntBASIC15.93■□□□□ 0.14
Nr1i3O35627 Gm6184-201ENSMUST00000120403 1261 ntBASIC15.93■□□□□ 0.14
Nr1i3O35627 Wdr61-203ENSMUST00000121204 1290 ntAPPRIS P1 TSL 1 (best) BASIC15.93■□□□□ 0.14
Nr1i3O35627 Gm16295-201ENSMUST00000139512 643 ntTSL 3 BASIC15.93■□□□□ 0.14
Nr1i3O35627 Csrp3-202ENSMUST00000167786 899 ntAPPRIS P1 TSL 1 (best) BASIC15.93■□□□□ 0.14
Nr1i3O35627 Gm2272-201ENSMUST00000194903 582 ntBASIC15.93■□□□□ 0.14
Nr1i3O35627 H2-Bl-211ENSMUST00000195838 1105 ntAPPRIS ALT2 TSL 1 (best) BASIC15.93■□□□□ 0.14
Nr1i3O35627 4930458A03Rik-201ENSMUST00000198197 961 ntTSL 1 (best) BASIC15.93■□□□□ 0.14
Nr1i3O35627 Wdr73-201ENSMUST00000026816 2114 ntAPPRIS P1 TSL 1 (best) BASIC15.93■□□□□ 0.14
Nr1i3O35627 Crb3-201ENSMUST00000071826 1194 ntAPPRIS P3 TSL 3 BASIC15.93■□□□□ 0.14
Nr1i3O35627 Nr2e3-201ENSMUST00000034831 2037 ntAPPRIS P1 TSL 1 (best) BASIC15.93■□□□□ 0.14
Nr1i3O35627 Ctnnb1-201ENSMUST00000007130 3623 ntAPPRIS P1 TSL 1 (best) BASIC15.93■□□□□ 0.14
Nr1i3O35627 Adam9-202ENSMUST00000084035 3985 ntAPPRIS ALT2 TSL 1 (best) BASIC15.93■□□□□ 0.14
Nr1i3O35627 Cdk8-205ENSMUST00000161181 2467 ntTSL 1 (best) BASIC15.93■□□□□ 0.14
Nr1i3O35627 Cep170b-211ENSMUST00000222711 6566 ntAPPRIS P1 TSL 5 BASIC15.93■□□□□ 0.14
Nr1i3O35627 Krt74-201ENSMUST00000088018 1648 ntAPPRIS P1 TSL 2 BASIC15.93■□□□□ 0.14
Nr1i3O35627 Acr-201ENSMUST00000023295 1504 ntAPPRIS P1 TSL 1 (best) BASIC15.93■□□□□ 0.14
Nr1i3O35627 Olah-201ENSMUST00000027955 1533 ntAPPRIS P1 TSL 1 (best) BASIC15.93■□□□□ 0.14
Nr1i3O35627 F11r-201ENSMUST00000043839 2518 ntAPPRIS P1 TSL 1 (best) BASIC15.93■□□□□ 0.14
Nr1i3O35627 Afg3l2-201ENSMUST00000025408 3085 ntAPPRIS P1 TSL 1 (best) BASIC15.93■□□□□ 0.14
Nr1i3O35627 Il2rb-202ENSMUST00000163494 1894 ntAPPRIS P1 TSL 1 (best) BASIC15.93■□□□□ 0.14
Nr1i3O35627 Gm10110-201ENSMUST00000081204 1891 ntTSL 5 BASIC15.93■□□□□ 0.14
Nr1i3O35627 Usp33-202ENSMUST00000117492 3886 ntAPPRIS ALT2 TSL 1 (best) BASIC15.93■□□□□ 0.14
Nr1i3O35627 Smtnl1-201ENSMUST00000028471 1761 ntAPPRIS P1 TSL 1 (best) BASIC15.92■□□□□ 0.14
Nr1i3O35627 Cpz-201ENSMUST00000038676 2245 ntAPPRIS P1 TSL 1 (best) BASIC15.92■□□□□ 0.14
Nr1i3O35627 Rtf1-201ENSMUST00000028767 4664 ntAPPRIS P1 TSL 1 (best) BASIC15.92■□□□□ 0.14
Nr1i3O35627 Cgn-202ENSMUST00000107273 5016 ntAPPRIS P3 TSL 1 (best) BASIC15.92■□□□□ 0.14
Nr1i3O35627 Smtnl2-202ENSMUST00000108500 3572 ntAPPRIS ALT2 TSL 1 (best) BASIC15.92■□□□□ 0.14
Nr1i3O35627 Gm13344-201ENSMUST00000137714 1557 ntTSL 1 (best) BASIC15.92■□□□□ 0.14
Nr1i3O35627 Eif2d-202ENSMUST00000068805 2009 ntAPPRIS ALT2 TSL 1 (best) BASIC15.92■□□□□ 0.14
Nr1i3O35627 Arhgef33-202ENSMUST00000223878 3253 ntAPPRIS P1 BASIC15.92■□□□□ 0.14
Nr1i3O35627 Ralgapa1-201ENSMUST00000085385 7901 ntAPPRIS P2 TSL 1 (best) BASIC15.92■□□□□ 0.14
Nr1i3O35627 Dnaja3-201ENSMUST00000060067 2648 ntAPPRIS P3 TSL 1 (best) BASIC15.92■□□□□ 0.14
Nr1i3O35627 Ocrl-201ENSMUST00000001202 5253 ntAPPRIS P1 TSL 1 (best) BASIC15.92■□□□□ 0.14
Nr1i3O35627 Arl4a-201ENSMUST00000101472 1200 ntAPPRIS P1 TSL 1 (best) BASIC15.92■□□□□ 0.14
Nr1i3O35627 Gm13464-201ENSMUST00000119418 935 ntBASIC15.92■□□□□ 0.14
Nr1i3O35627 Gm12981-201ENSMUST00000131733 622 ntTSL 1 (best) BASIC15.92■□□□□ 0.14
Nr1i3O35627 Cystm1-205ENSMUST00000152804 445 ntAPPRIS P2 TSL 3 BASIC15.92■□□□□ 0.14
Nr1i3O35627 Gm9726-201ENSMUST00000180321 678 ntBASIC15.92■□□□□ 0.14
Nr1i3O35627 Marveld2-203ENSMUST00000168772 1888 ntAPPRIS P1 TSL 5 BASIC15.92■□□□□ 0.14
Nr1i3O35627 4921514A10Rik-201ENSMUST00000181450 2114 ntTSL 5 BASIC15.92■□□□□ 0.14
Nr1i3O35627 Slc2a6-201ENSMUST00000045702 2138 ntAPPRIS P1 TSL 1 (best) BASIC15.92■□□□□ 0.14
Nr1i3O35627 Fbxl19-201ENSMUST00000033081 3410 ntAPPRIS P2 TSL 1 (best) BASIC15.92■□□□□ 0.14
Nr1i3O35627 A230072C01Rik-202ENSMUST00000136447 1412 ntTSL 1 (best) BASIC15.92■□□□□ 0.14
Nr1i3O35627 Mbtps2-201ENSMUST00000058098 4797 ntTSL 1 (best) BASIC15.92■□□□□ 0.14
Nr1i3O35627 Dzip1-201ENSMUST00000004055 4079 ntAPPRIS P1 TSL 1 (best) BASIC15.92■□□□□ 0.14
Nr1i3O35627 Tomm34-202ENSMUST00000109384 1923 ntAPPRIS ALT1 TSL 1 (best) BASIC15.92■□□□□ 0.14
Nr1i3O35627 Dscc1-201ENSMUST00000023059 1324 ntAPPRIS P2 TSL 1 (best) BASIC15.92■□□□□ 0.14
Nr1i3O35627 Ccdc158-203ENSMUST00000150359 3353 ntTSL 1 (best) BASIC15.92■□□□□ 0.14
Nr1i3O35627 Gnpda2-202ENSMUST00000120789 1594 ntTSL 1 (best) BASIC15.92■□□□□ 0.14
Nr1i3O35627 Opn5-201ENSMUST00000068355 1824 ntAPPRIS P1 TSL 1 (best) BASIC15.91■□□□□ 0.14
Nr1i3O35627 Vta1-205ENSMUST00000154132 1974 ntAPPRIS P2 TSL 1 (best) BASIC15.91■□□□□ 0.14
Nr1i3O35627 Frmd5-207ENSMUST00000138157 4230 ntTSL 1 (best) BASIC15.91■□□□□ 0.14
Nr1i3O35627 Etl4-207ENSMUST00000114610 2863 ntAPPRIS ALT2 TSL 1 (best) BASIC15.91■□□□□ 0.14
Nr1i3O35627 Arpin-201ENSMUST00000048731 2277 ntAPPRIS P1 TSL 1 (best) BASIC15.91■□□□□ 0.14
Nr1i3O35627 Arhgap40-203ENSMUST00000165398 2028 ntAPPRIS P1 TSL 5 BASIC15.91■□□□□ 0.14
Nr1i3O35627 Pcyox1l-201ENSMUST00000025472 2017 ntAPPRIS P1 TSL 1 (best) BASIC15.91■□□□□ 0.14
Nr1i3O35627 Pitx2-203ENSMUST00000106382 1757 ntTSL 1 (best) BASIC15.91■□□□□ 0.14
Nr1i3O35627 Npnt-204ENSMUST00000117164 1779 ntAPPRIS ALT2 TSL 1 (best) BASIC15.91■□□□□ 0.14
Nr1i3O35627 Camta1-202ENSMUST00000097774 8533 ntAPPRIS ALT2 TSL 5 BASIC15.91■□□□□ 0.14
Nr1i3O35627 Nme1-202ENSMUST00000107844 452 ntTSL 3 BASIC15.91■□□□□ 0.14
Nr1i3O35627 Mir8098-201ENSMUST00000184011 137 ntBASIC15.91■□□□□ 0.14
Nr1i3O35627 Rps2-ps5-201ENSMUST00000184266 849 ntBASIC15.91■□□□□ 0.14
Nr1i3O35627 Spr-ps1-202ENSMUST00000186281 706 ntTSL 2 BASIC15.91■□□□□ 0.14
Nr1i3O35627 Gm42413-201ENSMUST00000196216 338 ntTSL 5 BASIC15.91■□□□□ 0.14
Nr1i3O35627 Zfp747-202ENSMUST00000205832 618 ntTSL 3 BASIC15.91■□□□□ 0.14
Nr1i3O35627 AC131709.1-201ENSMUST00000224731 1180 ntBASIC15.91■□□□□ 0.14
Nr1i3O35627 Skor1-202ENSMUST00000116613 3591 ntAPPRIS ALT2 TSL 1 (best) BASIC15.91■□□□□ 0.14
Nr1i3O35627 Vsig10-202ENSMUST00000111967 4236 ntAPPRIS P2 TSL 5 BASIC15.91■□□□□ 0.14
Nr1i3O35627 Zfp612-202ENSMUST00000212754 4863 ntAPPRIS P1 TSL 1 (best) BASIC15.91■□□□□ 0.14
Nr1i3O35627 Hnf4a-202ENSMUST00000109411 4362 ntTSL 1 (best) BASIC15.91■□□□□ 0.14
Nr1i3O35627 Map4-201ENSMUST00000035055 6091 ntAPPRIS P3 TSL 1 (best) BASIC15.91■□□□□ 0.14
Nr1i3O35627 Gm8237-201ENSMUST00000164484 2051 ntAPPRIS P5 TSL 5 BASIC15.91■□□□□ 0.14
Nr1i3O35627 Ppp1r3g-201ENSMUST00000132661 2361 ntAPPRIS P1 TSL 1 (best) BASIC15.91■□□□□ 0.14
Nr1i3O35627 Cbarp-215ENSMUST00000170219 2941 ntAPPRIS P2 TSL 5 BASIC15.91■□□□□ 0.14
Nr1i3O35627 Slc6a8-203ENSMUST00000114465 3314 ntAPPRIS P1 TSL 1 (best) BASIC15.91■□□□□ 0.14
Nr1i3O35627 Dnm1-217ENSMUST00000202578 2820 ntAPPRIS P2 TSL 5 BASIC15.9■□□□□ 0.14
Nr1i3O35627 Sync-201ENSMUST00000102599 2042 ntAPPRIS P1 TSL 1 (best) BASIC15.9■□□□□ 0.14
Nr1i3O35627 AC131743.5-201ENSMUST00000220775 1618 ntBASIC15.9■□□□□ 0.14
Nr1i3O35627 Fkbp10-201ENSMUST00000001595 2584 ntAPPRIS P1 TSL 1 (best) BASIC15.9■□□□□ 0.14
Nr1i3O35627 Pex5-201ENSMUST00000035861 3139 ntAPPRIS P4 TSL 1 (best) BASIC15.9■□□□□ 0.14
Nr1i3O35627 Ntf3-202ENSMUST00000112244 1399 ntAPPRIS ALT1 TSL 3 BASIC15.9■□□□□ 0.14
Nr1i3O35627 Ercc1-201ENSMUST00000003645 1375 ntAPPRIS P1 TSL 1 (best) BASIC15.9■□□□□ 0.14
Nr1i3O35627 Nosip-202ENSMUST00000107829 972 ntAPPRIS ALT2 TSL 1 (best) BASIC15.9■□□□□ 0.14
Nr1i3O35627 Rpl13-ps5-201ENSMUST00000117813 630 ntBASIC15.9■□□□□ 0.14
Nr1i3O35627 Sec22b-202ENSMUST00000122288 1177 ntTSL 1 (best) BASIC15.9■□□□□ 0.14
Nr1i3O35627 Snhg15-203ENSMUST00000134527 675 ntTSL 1 (best) BASIC15.9■□□□□ 0.14
Nr1i3O35627 Tmem255b-201ENSMUST00000167071 1138 ntTSL 1 (best) BASIC15.9■□□□□ 0.14
Nr1i3O35627 5430405H02Rik-203ENSMUST00000185402 904 ntTSL 1 (best) BASIC15.9■□□□□ 0.14
Nr1i3O35627 Pih1d1-206ENSMUST00000210139 1077 ntAPPRIS P1 TSL 1 (best) BASIC15.9■□□□□ 0.14
Nr1i3O35627 Zfp810-203ENSMUST00000215202 822 ntTSL 3 BASIC15.9■□□□□ 0.14
Nr1i3O35627 Mgst3-201ENSMUST00000028005 1097 ntAPPRIS P1 TSL 1 (best) BASIC15.9■□□□□ 0.14
Nr1i3O35627 1700080E11Rik-201ENSMUST00000035180 883 ntAPPRIS P1 TSL 1 (best) BASIC15.9■□□□□ 0.14
Nr1i3O35627 Psma5-201ENSMUST00000090569 1239 ntAPPRIS P1 TSL 1 (best) BASIC15.9■□□□□ 0.14
Nr1i3O35627 Pid1-204ENSMUST00000176559 1564 ntTSL 2 BASIC15.9■□□□□ 0.14
Nr1i3O35627 Gm8096-201ENSMUST00000209921 1591 ntBASIC15.9■□□□□ 0.14
Nr1i3O35627 Ankrd10-202ENSMUST00000169782 5156 ntTSL 1 (best) BASIC15.9■□□□□ 0.14
Retrieved 100 of 76,532 protein–RNA pairs in 32.8 ms