Protein–RNA interactions for Protein: O35393

Efnb3, Ephrin-B3, mousemouse

Predictions only

Length 340 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Efnb3O35393 Sugp2-214ENSMUST00000164403 4099 ntAPPRIS P1 TSL 1 (best) BASIC11.74□□□□□ -0.53
Efnb3O35393 Kif7-204ENSMUST00000184137 4093 ntAPPRIS P3 TSL 5 BASIC11.74□□□□□ -0.53
Efnb3O35393 Dmpk-201ENSMUST00000032568 2761 ntAPPRIS P3 TSL 5 BASIC11.74□□□□□ -0.53
Efnb3O35393 Usp33-201ENSMUST00000026507 4153 ntAPPRIS ALT2 TSL 1 (best) BASIC11.74□□□□□ -0.53
Efnb3O35393 Tmed9-201ENSMUST00000109905 1420 ntAPPRIS P1 TSL 1 (best) BASIC11.74□□□□□ -0.53
Efnb3O35393 Ndufv2-203ENSMUST00000143987 1540 ntAPPRIS P1 TSL 1 (best) BASIC11.74□□□□□ -0.53
Efnb3O35393 Snrpn-202ENSMUST00000098402 2076 ntAPPRIS P1 TSL 5 BASIC11.74□□□□□ -0.53
Efnb3O35393 Fbrs-202ENSMUST00000205432 4166 ntAPPRIS ALT2 TSL 5 BASIC11.74□□□□□ -0.53
Efnb3O35393 4921514A10Rik-201ENSMUST00000181450 2114 ntTSL 5 BASIC11.74□□□□□ -0.53
Efnb3O35393 Prkcsh-205ENSMUST00000216344 2228 ntAPPRIS P3 TSL 1 (best) BASIC11.74□□□□□ -0.53
Efnb3O35393 Nphp1-201ENSMUST00000028857 2260 ntAPPRIS P3 TSL 1 (best) BASIC11.74□□□□□ -0.53
Efnb3O35393 Cadps2-213ENSMUST00000166458 4598 ntAPPRIS ALT2 TSL 5 BASIC11.74□□□□□ -0.53
Efnb3O35393 Tdrd6-201ENSMUST00000045717 7055 ntAPPRIS P3 TSL 1 (best) BASIC11.74□□□□□ -0.53
Efnb3O35393 Elmod1-201ENSMUST00000048409 2605 ntAPPRIS P2 TSL 1 (best) BASIC11.73□□□□□ -0.53
Efnb3O35393 Iffo1-201ENSMUST00000117675 2833 ntAPPRIS P4 TSL 1 (best) BASIC11.73□□□□□ -0.53
Efnb3O35393 Synj1-203ENSMUST00000121759 7090 ntAPPRIS P4 TSL 5 BASIC11.73□□□□□ -0.53
Efnb3O35393 Agap1-201ENSMUST00000027521 11921 ntAPPRIS P4 TSL 1 (best) BASIC11.73□□□□□ -0.53
Efnb3O35393 Gm38391-201ENSMUST00000191720 4069 ntBASIC11.73□□□□□ -0.53
Efnb3O35393 Plxna1-202ENSMUST00000163139 9034 ntAPPRIS P1 TSL 1 (best) BASIC11.73□□□□□ -0.53
Efnb3O35393 Myocd-202ENSMUST00000102635 4935 ntAPPRIS P3 TSL 1 (best) BASIC11.73□□□□□ -0.53
Efnb3O35393 Cldn7-204ENSMUST00000108597 913 ntAPPRIS P1 TSL 2 BASIC11.73□□□□□ -0.53
Efnb3O35393 Adal-203ENSMUST00000110662 1231 ntTSL 5 BASIC11.73□□□□□ -0.53
Efnb3O35393 Klc2-203ENSMUST00000113728 2838 ntTSL 5 BASIC11.73□□□□□ -0.53
Efnb3O35393 Fkbp14-202ENSMUST00000117375 1830 ntTSL 1 (best) BASIC11.73□□□□□ -0.53
Efnb3O35393 Gm15952-201ENSMUST00000122858 490 ntTSL 3 BASIC11.73□□□□□ -0.53
Efnb3O35393 Ppp1r3g-201ENSMUST00000132661 2361 ntAPPRIS P1 TSL 1 (best) BASIC11.73□□□□□ -0.53
Efnb3O35393 4930401G09Rik-201ENSMUST00000139500 637 ntTSL 1 (best) BASIC11.73□□□□□ -0.53
Efnb3O35393 Gm7616-201ENSMUST00000143112 624 ntTSL 3 BASIC11.73□□□□□ -0.53
Efnb3O35393 Nsd3-207ENSMUST00000143445 2416 ntTSL 1 (best) BASIC11.73□□□□□ -0.53
Efnb3O35393 Gm13563-202ENSMUST00000150375 851 ntTSL 3 BASIC11.73□□□□□ -0.53
Efnb3O35393 Hist1h2bc-201ENSMUST00000018246 1156 ntAPPRIS P1 TSL 1 (best) BASIC11.73□□□□□ -0.53
Efnb3O35393 Gm17807-201ENSMUST00000186869 298 ntBASIC11.73□□□□□ -0.53
Efnb3O35393 Hnrnpa2b1-204ENSMUST00000203220 1638 ntAPPRIS P2 TSL 1 (best) BASIC11.73□□□□□ -0.53
Efnb3O35393 Krt10-202ENSMUST00000211768 557 ntTSL 3 BASIC11.73□□□□□ -0.53
Efnb3O35393 Smpd3-202ENSMUST00000212896 2626 ntAPPRIS P1 TSL 1 (best) BASIC11.73□□□□□ -0.53
Efnb3O35393 Gm33195-201ENSMUST00000220827 2337 ntTSL 5 BASIC11.73□□□□□ -0.53
Efnb3O35393 Pla2g2c-201ENSMUST00000030530 1618 ntAPPRIS P1 TSL 3 BASIC11.73□□□□□ -0.53
Efnb3O35393 B3gnt4-201ENSMUST00000031384 1423 ntAPPRIS P1 BASIC11.73□□□□□ -0.53
Efnb3O35393 Myh14-201ENSMUST00000048102 6457 ntAPPRIS ALT2 TSL 1 (best) BASIC11.73□□□□□ -0.53
Efnb3O35393 Hist1h2ba-201ENSMUST00000052776 384 ntAPPRIS P1 BASIC11.73□□□□□ -0.53
Efnb3O35393 Exoc3l-201ENSMUST00000057855 2497 ntAPPRIS P1 TSL 1 (best) BASIC11.73□□□□□ -0.53
Efnb3O35393 Ccer1-201ENSMUST00000060703 1865 ntAPPRIS P1 BASIC11.73□□□□□ -0.53
Efnb3O35393 Itsn1-202ENSMUST00000064797 7418 ntAPPRIS ALT2 TSL 5 BASIC11.73□□□□□ -0.53
Efnb3O35393 Wbp2-201ENSMUST00000074628 1826 ntAPPRIS P1 TSL 1 (best) BASIC11.73□□□□□ -0.53
Efnb3O35393 Tgif2-202ENSMUST00000081335 2900 ntAPPRIS P1 TSL 1 (best) BASIC11.73□□□□□ -0.53
Efnb3O35393 Nptn-201ENSMUST00000085651 2024 ntTSL 1 (best) BASIC11.73□□□□□ -0.53
Efnb3O35393 Mxra8os-201ENSMUST00000097740 687 ntBASIC11.73□□□□□ -0.53
Efnb3O35393 Etv3-202ENSMUST00000119109 5309 ntAPPRIS P2 TSL 1 (best) BASIC11.73□□□□□ -0.53
Efnb3O35393 Dennd5b-201ENSMUST00000111557 9831 ntAPPRIS P1 TSL 5 BASIC11.73□□□□□ -0.53
Efnb3O35393 Syt1-201ENSMUST00000064054 4745 ntAPPRIS P1 TSL 1 (best) BASIC11.73□□□□□ -0.53
Efnb3O35393 Hipk3-202ENSMUST00000111124 4125 ntAPPRIS P1 TSL 5 BASIC11.73□□□□□ -0.53
Efnb3O35393 Gpr153-202ENSMUST00000105650 3838 ntAPPRIS ALT2 TSL 5 BASIC11.73□□□□□ -0.53
Efnb3O35393 Dnm1-205ENSMUST00000113365 3257 ntAPPRIS ALT1 TSL 5 BASIC11.73□□□□□ -0.53
Efnb3O35393 Retreg3-201ENSMUST00000017946 3165 ntAPPRIS P1 TSL 1 (best) BASIC11.73□□□□□ -0.53
Efnb3O35393 Trim32-201ENSMUST00000050850 3194 ntAPPRIS P1 TSL 1 (best) BASIC11.73□□□□□ -0.53
Efnb3O35393 Ubc-202ENSMUST00000136312 2618 ntAPPRIS P1 TSL 1 (best) BASIC11.73□□□□□ -0.53
Efnb3O35393 Brpf1-210ENSMUST00000204626 4381 ntAPPRIS ALT2 TSL 1 (best) BASIC11.72□□□□□ -0.53
Efnb3O35393 Cdt1-201ENSMUST00000006760 2189 ntAPPRIS P1 TSL 1 (best) BASIC11.72□□□□□ -0.53
Efnb3O35393 Fhad1-202ENSMUST00000105779 4263 ntAPPRIS P1 TSL 5 BASIC11.72□□□□□ -0.53
Efnb3O35393 Dimt1-201ENSMUST00000022203 2051 ntAPPRIS P1 TSL 1 (best) BASIC11.72□□□□□ -0.53
Efnb3O35393 Hcn3-201ENSMUST00000029686 4002 ntAPPRIS P1 TSL 1 (best) BASIC11.72□□□□□ -0.53
Efnb3O35393 Epb41l1-205ENSMUST00000109574 5904 ntTSL 1 (best) BASIC11.72□□□□□ -0.53
Efnb3O35393 Gpr137c-201ENSMUST00000146150 3917 ntAPPRIS P2 TSL 5 BASIC11.72□□□□□ -0.53
Efnb3O35393 Gm44981-201ENSMUST00000205549 1943 ntBASIC11.72□□□□□ -0.53
Efnb3O35393 Hist1h1e-201ENSMUST00000062045 1930 ntAPPRIS P1 BASIC11.72□□□□□ -0.53
Efnb3O35393 Prox1-201ENSMUST00000010319 3285 ntAPPRIS P1 TSL 1 (best) BASIC11.72□□□□□ -0.53
Efnb3O35393 Vopp1-202ENSMUST00000127485 2908 ntTSL 1 (best) BASIC11.72□□□□□ -0.53
Efnb3O35393 Pqlc2-205ENSMUST00000172747 1405 ntAPPRIS P2 TSL 5 BASIC11.72□□□□□ -0.53
Efnb3O35393 Alox5-201ENSMUST00000026795 2821 ntAPPRIS P1 TSL 1 (best) BASIC11.72□□□□□ -0.53
Efnb3O35393 Rpl3l-202ENSMUST00000170239 1375 ntAPPRIS P1 TSL 5 BASIC11.72□□□□□ -0.53
Efnb3O35393 Cdhr5-202ENSMUST00000167263 2628 ntAPPRIS ALT2 TSL 1 (best) BASIC11.72□□□□□ -0.53
Efnb3O35393 Gm43738-201ENSMUST00000200659 2635 ntAPPRIS P1 TSL 5 BASIC11.72□□□□□ -0.53
Efnb3O35393 St6gal2-202ENSMUST00000086878 2606 ntTSL 1 (best) BASIC11.72□□□□□ -0.53
Efnb3O35393 Klk12-202ENSMUST00000107970 1115 ntAPPRIS P1 TSL 5 BASIC11.72□□□□□ -0.53
Efnb3O35393 Fhad1os2-201ENSMUST00000152351 945 ntTSL 1 (best) BASIC11.72□□□□□ -0.53
Efnb3O35393 1700012D14Rik-201ENSMUST00000209597 605 ntTSL 3 BASIC11.72□□□□□ -0.53
Efnb3O35393 Gm45631-201ENSMUST00000210318 1244 ntTSL 1 (best) BASIC11.72□□□□□ -0.53
Efnb3O35393 Vegfc-203ENSMUST00000210831 555 ntTSL 1 (best) BASIC11.72□□□□□ -0.53
Efnb3O35393 Gm18669-201ENSMUST00000216049 778 ntBASIC11.72□□□□□ -0.53
Efnb3O35393 Rpp25l-201ENSMUST00000038434 856 ntAPPRIS P1 TSL 1 (best) BASIC11.72□□□□□ -0.53
Efnb3O35393 Gm10313-201ENSMUST00000095320 1002 ntBASIC11.72□□□□□ -0.53
Efnb3O35393 Tpm3-201ENSMUST00000029549 2230 ntTSL 1 (best) BASIC11.72□□□□□ -0.53
Efnb3O35393 Lman2-201ENSMUST00000021940 4315 ntAPPRIS P1 TSL 1 (best) BASIC11.72□□□□□ -0.53
Efnb3O35393 Trmt1-205ENSMUST00000125370 2114 ntAPPRIS ALT2 TSL 5 BASIC11.72□□□□□ -0.53
Efnb3O35393 Tex13b-201ENSMUST00000044179 2116 ntAPPRIS P1 TSL 1 (best) BASIC11.72□□□□□ -0.53
Efnb3O35393 Tub-202ENSMUST00000119474 2097 ntTSL 1 (best) BASIC11.72□□□□□ -0.53
Efnb3O35393 Ralyl-206ENSMUST00000193117 2933 ntAPPRIS P1 TSL 2 BASIC11.72□□□□□ -0.53
Efnb3O35393 Zbtb20-203ENSMUST00000114691 2891 ntAPPRIS ALT1 TSL 1 (best) BASIC11.72□□□□□ -0.53
Efnb3O35393 Pycr1-201ENSMUST00000026133 1861 ntAPPRIS P1 TSL 1 (best) BASIC11.72□□□□□ -0.53
Efnb3O35393 Lzts1-201ENSMUST00000037049 1800 ntAPPRIS P1 TSL 1 (best) BASIC11.72□□□□□ -0.53
Efnb3O35393 1700029J07Rik-201ENSMUST00000095323 2740 ntAPPRIS P1 TSL 1 (best) BASIC11.72□□□□□ -0.53
Efnb3O35393 Pomgnt1-202ENSMUST00000106496 2613 ntTSL 1 (best) BASIC11.72□□□□□ -0.53
Efnb3O35393 Srpx-201ENSMUST00000044789 2477 ntAPPRIS P2 TSL 1 (best) BASIC11.71□□□□□ -0.53
Efnb3O35393 Kcnk6-201ENSMUST00000085818 4084 ntAPPRIS P1 TSL 1 (best) BASIC11.71□□□□□ -0.53
Efnb3O35393 Ntng1-205ENSMUST00000106575 1620 ntAPPRIS ALT1 TSL 5 BASIC11.71□□□□□ -0.53
Efnb3O35393 Itga3-201ENSMUST00000001548 4861 ntAPPRIS P3 TSL 1 (best) BASIC11.71□□□□□ -0.53
Efnb3O35393 Ntng1-202ENSMUST00000072596 1620 ntAPPRIS P2 TSL 1 (best) BASIC11.71□□□□□ -0.53
Efnb3O35393 Vwa2-201ENSMUST00000026068 4049 ntAPPRIS P1 TSL 1 (best) BASIC11.71□□□□□ -0.53
Efnb3O35393 Foxo4-201ENSMUST00000062000 3162 ntAPPRIS P1 TSL 1 (best) BASIC11.71□□□□□ -0.53
Efnb3O35393 Srp68-202ENSMUST00000106425 2330 ntTSL 5 BASIC11.71□□□□□ -0.53
Retrieved 100 of 76,532 protein–RNA pairs in 82.6 ms