Protein–RNA interactions for Protein: O35188

Cx3cl1, Fractalkine, mousemouse

Predictions only

Length 395 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Cx3cl1O35188 Nacc2-201ENSMUST00000028300 6378 ntAPPRIS P1 TSL 1 (best) BASIC13.94□□□□□ -0.18
Cx3cl1O35188 Ppp1r3d-201ENSMUST00000058678 3267 ntAPPRIS P1 BASIC13.94□□□□□ -0.18
Cx3cl1O35188 Aig1-202ENSMUST00000105534 617 ntTSL 5 BASIC13.94□□□□□ -0.18
Cx3cl1O35188 Nudt1-204ENSMUST00000110826 606 ntAPPRIS P1 TSL 1 (best) BASIC13.94□□□□□ -0.18
Cx3cl1O35188 Znhit1-204ENSMUST00000111091 1070 ntTSL 5 BASIC13.94□□□□□ -0.18
Cx3cl1O35188 Rhox7b-201ENSMUST00000115156 1091 ntAPPRIS P1 TSL 1 (best) BASIC13.94□□□□□ -0.18
Cx3cl1O35188 Gm16198-201ENSMUST00000118766 670 ntBASIC13.94□□□□□ -0.18
Cx3cl1O35188 Nfya-206ENSMUST00000160319 1407 ntTSL 5 BASIC13.94□□□□□ -0.18
Cx3cl1O35188 Gm32031-203ENSMUST00000208993 649 ntTSL 2 BASIC13.94□□□□□ -0.18
Cx3cl1O35188 AC164567.1-201ENSMUST00000219185 960 ntBASIC13.94□□□□□ -0.18
Cx3cl1O35188 Lypd1-201ENSMUST00000027582 1447 ntTSL 1 (best) BASIC13.94□□□□□ -0.18
Cx3cl1O35188 Timm10b-201ENSMUST00000058333 694 ntAPPRIS P2 TSL 1 (best) BASIC13.94□□□□□ -0.18
Cx3cl1O35188 Krt16-201ENSMUST00000007280 1565 ntAPPRIS P1 TSL 1 (best) BASIC13.94□□□□□ -0.18
Cx3cl1O35188 Rhox7a-201ENSMUST00000096454 983 ntAPPRIS P1 TSL 1 (best) BASIC13.94□□□□□ -0.18
Cx3cl1O35188 Apol7d-201ENSMUST00000097699 826 ntTSL 2 BASIC13.94□□□□□ -0.18
Cx3cl1O35188 Mast2-201ENSMUST00000003908 5445 ntAPPRIS ALT2 TSL 1 (best) BASIC13.94□□□□□ -0.18
Cx3cl1O35188 Tle2-205ENSMUST00000135211 2746 ntAPPRIS ALT2 TSL 1 (best) BASIC13.94□□□□□ -0.18
Cx3cl1O35188 Apol8-201ENSMUST00000070911 1838 ntAPPRIS P2 TSL 1 (best) BASIC13.94□□□□□ -0.18
Cx3cl1O35188 Gm26702-201ENSMUST00000181730 4570 ntTSL 5 BASIC13.94□□□□□ -0.18
Cx3cl1O35188 Arhgef1-201ENSMUST00000047873 3212 ntAPPRIS ALT2 TSL 1 (best) BASIC13.94□□□□□ -0.18
Cx3cl1O35188 Dcaf17-201ENSMUST00000064141 1905 ntAPPRIS P1 TSL 1 (best) BASIC13.94□□□□□ -0.18
Cx3cl1O35188 E230016M11Rik-201ENSMUST00000130657 1764 ntTSL 1 (best) BASIC13.94□□□□□ -0.18
Cx3cl1O35188 Fam76b-201ENSMUST00000059579 3702 ntAPPRIS P1 TSL 1 (best) BASIC13.93□□□□□ -0.18
Cx3cl1O35188 Slc7a15-204ENSMUST00000165657 1467 ntTSL 1 (best) BASIC13.93□□□□□ -0.18
Cx3cl1O35188 Slc7a15-202ENSMUST00000095863 1467 ntAPPRIS P1 TSL 1 (best) BASIC13.93□□□□□ -0.18
Cx3cl1O35188 Actn3-201ENSMUST00000006626 2880 ntAPPRIS P1 TSL 1 (best) BASIC13.93□□□□□ -0.18
Cx3cl1O35188 Iqck-202ENSMUST00000106547 2026 ntAPPRIS P2 TSL 5 BASIC13.93□□□□□ -0.18
Cx3cl1O35188 Nelfa-201ENSMUST00000030993 2580 ntAPPRIS P1 TSL 1 (best) BASIC13.93□□□□□ -0.18
Cx3cl1O35188 Pola2-201ENSMUST00000025752 2424 ntAPPRIS P1 TSL 1 (best) BASIC13.93□□□□□ -0.18
Cx3cl1O35188 Aldh3a1-201ENSMUST00000019246 1729 ntAPPRIS P1 TSL 1 (best) BASIC13.93□□□□□ -0.18
Cx3cl1O35188 Erbb2-201ENSMUST00000058295 5012 ntAPPRIS P1 TSL 1 (best) BASIC13.93□□□□□ -0.18
Cx3cl1O35188 Acat3-201ENSMUST00000043923 2123 ntAPPRIS P1 TSL 1 (best) BASIC13.93□□□□□ -0.18
Cx3cl1O35188 Arl6-202ENSMUST00000099646 1554 ntTSL 1 (best) BASIC13.93□□□□□ -0.18
Cx3cl1O35188 Myh14-201ENSMUST00000048102 6457 ntAPPRIS ALT2 TSL 1 (best) BASIC13.93□□□□□ -0.18
Cx3cl1O35188 Ifna12-201ENSMUST00000102806 797 ntAPPRIS P1 BASIC13.93□□□□□ -0.18
Cx3cl1O35188 Gm4995-201ENSMUST00000117247 432 ntBASIC13.93□□□□□ -0.18
Cx3cl1O35188 Gm12892-201ENSMUST00000117367 1146 ntBASIC13.93□□□□□ -0.18
Cx3cl1O35188 Rpl34-ps1-201ENSMUST00000121998 354 ntBASIC13.93□□□□□ -0.18
Cx3cl1O35188 Cby3-202ENSMUST00000164067 731 ntAPPRIS P1 TSL 5 BASIC13.93□□□□□ -0.18
Cx3cl1O35188 Tma7-201ENSMUST00000167504 944 ntAPPRIS P1 TSL 1 (best) BASIC13.93□□□□□ -0.18
Cx3cl1O35188 Gm26769-201ENSMUST00000180469 619 ntTSL 3 BASIC13.93□□□□□ -0.18
Cx3cl1O35188 1700021A07Rik-203ENSMUST00000188024 404 ntTSL 3 BASIC13.93□□□□□ -0.18
Cx3cl1O35188 Gm2213-201ENSMUST00000197485 688 ntBASIC13.93□□□□□ -0.18
Cx3cl1O35188 CT943659.1-201ENSMUST00000215459 326 ntBASIC13.93□□□□□ -0.18
Cx3cl1O35188 Zfyve21-206ENSMUST00000222843 705 ntTSL 3 BASIC13.93□□□□□ -0.18
Cx3cl1O35188 Rpl34-ps2-201ENSMUST00000081679 354 ntBASIC13.93□□□□□ -0.18
Cx3cl1O35188 Gm10154-201ENSMUST00000084445 354 ntBASIC13.93□□□□□ -0.18
Cx3cl1O35188 Arhgef40-220ENSMUST00000182909 5108 ntAPPRIS P4 TSL 5 BASIC13.93□□□□□ -0.18
Cx3cl1O35188 Rnase10-202ENSMUST00000164632 1521 ntAPPRIS ALT2 TSL 1 (best) BASIC13.93□□□□□ -0.18
Cx3cl1O35188 Ap5m1-205ENSMUST00000227431 3757 ntBASIC13.93□□□□□ -0.18
Cx3cl1O35188 Phospho2-202ENSMUST00000112266 2194 ntAPPRIS P1 TSL 3 BASIC13.93□□□□□ -0.18
Cx3cl1O35188 Zdhhc25-201ENSMUST00000066949 1368 ntAPPRIS P1 BASIC13.93□□□□□ -0.18
Cx3cl1O35188 Rasgrp2-208ENSMUST00000113476 2296 ntAPPRIS P1 TSL 5 BASIC13.93□□□□□ -0.18
Cx3cl1O35188 Rhpn1-202ENSMUST00000121137 2283 ntAPPRIS ALT2 TSL 1 (best) BASIC13.93□□□□□ -0.18
Cx3cl1O35188 Esco1-203ENSMUST00000115864 2148 ntAPPRIS ALT2 TSL 1 (best) BASIC13.93□□□□□ -0.18
Cx3cl1O35188 Gm16425-201ENSMUST00000118143 3130 ntBASIC13.93□□□□□ -0.18
Cx3cl1O35188 Apoa4-201ENSMUST00000034585 1815 ntAPPRIS P1 TSL 1 (best) BASIC13.92□□□□□ -0.18
Cx3cl1O35188 4833422C13Rik-201ENSMUST00000099331 2083 ntTSL 1 (best) BASIC13.92□□□□□ -0.18
Cx3cl1O35188 Hcfc2-201ENSMUST00000020478 3422 ntAPPRIS P1 TSL 5 BASIC13.92□□□□□ -0.18
Cx3cl1O35188 Stk33-202ENSMUST00000106745 2410 ntAPPRIS P1 TSL 1 (best) BASIC13.92□□□□□ -0.18
Cx3cl1O35188 Lamp2-203ENSMUST00000074913 2184 ntAPPRIS ALT2 TSL 1 (best) BASIC13.92□□□□□ -0.18
Cx3cl1O35188 Scrt1-201ENSMUST00000096365 4010 ntAPPRIS P1 TSL 1 (best) BASIC13.92□□□□□ -0.18
Cx3cl1O35188 Cep57-201ENSMUST00000034398 2523 ntAPPRIS P3 TSL 1 (best) BASIC13.92□□□□□ -0.18
Cx3cl1O35188 Spns1-203ENSMUST00000119846 2017 ntTSL 5 BASIC13.92□□□□□ -0.18
Cx3cl1O35188 Tbx3os1-206ENSMUST00000202307 1787 ntTSL 1 (best) BASIC13.92□□□□□ -0.18
Cx3cl1O35188 Cbx6-201ENSMUST00000109623 996 ntTSL 5 BASIC13.92□□□□□ -0.18
Cx3cl1O35188 Gm4913-201ENSMUST00000117075 1290 ntBASIC13.92□□□□□ -0.18
Cx3cl1O35188 H2af-ps-201ENSMUST00000119066 295 ntBASIC13.92□□□□□ -0.18
Cx3cl1O35188 Gm25911-201ENSMUST00000157621 56 ntBASIC13.92□□□□□ -0.18
Cx3cl1O35188 Gm29520-201ENSMUST00000191209 1067 ntTSL 5 BASIC13.92□□□□□ -0.18
Cx3cl1O35188 Klhdc8b-207ENSMUST00000193286 2956 ntAPPRIS P1 TSL 1 (best) BASIC13.92□□□□□ -0.18
Cx3cl1O35188 Tspyl-ps-201ENSMUST00000220692 1117 ntBASIC13.92□□□□□ -0.18
Cx3cl1O35188 Ndufaf2-202ENSMUST00000223734 556 ntBASIC13.92□□□□□ -0.18
Cx3cl1O35188 Msrb2-201ENSMUST00000023856 1196 ntAPPRIS P1 TSL 1 (best) BASIC13.92□□□□□ -0.18
Cx3cl1O35188 Pmf1-201ENSMUST00000056370 1007 ntAPPRIS P1 TSL 1 (best) BASIC13.92□□□□□ -0.18
Cx3cl1O35188 Scube2-203ENSMUST00000106729 3563 ntAPPRIS P2 TSL 1 (best) BASIC13.92□□□□□ -0.18
Cx3cl1O35188 Glis1-202ENSMUST00000106738 2744 ntAPPRIS ALT2 TSL 5 BASIC13.92□□□□□ -0.18
Cx3cl1O35188 Sbno2-204ENSMUST00000217972 2462 ntTSL 2 BASIC13.92□□□□□ -0.18
Cx3cl1O35188 Unc5d-202ENSMUST00000209401 3081 ntTSL 1 (best) BASIC13.92□□□□□ -0.18
Cx3cl1O35188 Unc5d-203ENSMUST00000210298 3060 ntTSL 1 (best) BASIC13.92□□□□□ -0.18
Cx3cl1O35188 Unc5d-205ENSMUST00000211448 3087 ntTSL 1 (best) BASIC13.92□□□□□ -0.18
Cx3cl1O35188 Fbxl19-201ENSMUST00000033081 3410 ntAPPRIS P2 TSL 1 (best) BASIC13.92□□□□□ -0.18
Cx3cl1O35188 Kdm4b-202ENSMUST00000086835 4360 ntAPPRIS ALT2 TSL 5 BASIC13.92□□□□□ -0.18
Cx3cl1O35188 Myrf-201ENSMUST00000088013 5674 ntAPPRIS ALT2 TSL 5 BASIC13.92□□□□□ -0.18
Cx3cl1O35188 Zhx3-203ENSMUST00000109460 4480 ntAPPRIS P1 TSL 1 (best) BASIC13.92□□□□□ -0.18
Cx3cl1O35188 Celf3-204ENSMUST00000197558 2414 ntTSL 1 (best) BASIC13.92□□□□□ -0.18
Cx3cl1O35188 Chtf8-202ENSMUST00000175940 2890 ntAPPRIS P1 TSL 1 (best) BASIC13.92□□□□□ -0.18
Cx3cl1O35188 Kdm6a-201ENSMUST00000044484 5918 ntAPPRIS P1 TSL 5 BASIC13.92□□□□□ -0.18
Cx3cl1O35188 Kdm6a-202ENSMUST00000052368 5935 ntTSL 1 (best) BASIC13.92□□□□□ -0.18
Cx3cl1O35188 Arl5c-201ENSMUST00000042971 1571 ntAPPRIS P1 TSL 1 (best) BASIC13.92□□□□□ -0.18
Cx3cl1O35188 Tarsl2-201ENSMUST00000032728 3192 ntAPPRIS P1 TSL 1 (best) BASIC13.91□□□□□ -0.18
Cx3cl1O35188 Gm17018-201ENSMUST00000047057 1345 ntAPPRIS P1 TSL 1 (best) BASIC13.91□□□□□ -0.18
Cx3cl1O35188 Rnd1-201ENSMUST00000003451 2203 ntAPPRIS P1 TSL 1 (best) BASIC13.91□□□□□ -0.18
Cx3cl1O35188 Cep63-201ENSMUST00000093791 2696 ntTSL 1 (best) BASIC13.91□□□□□ -0.18
Cx3cl1O35188 Ccdc154-202ENSMUST00000182292 1989 ntAPPRIS ALT2 TSL 5 BASIC13.91□□□□□ -0.18
Cx3cl1O35188 Idh3b-201ENSMUST00000028892 1616 ntAPPRIS P1 TSL 1 (best) BASIC13.91□□□□□ -0.18
Cx3cl1O35188 Mst1-201ENSMUST00000035211 2262 ntAPPRIS P2 TSL 1 (best) BASIC13.91□□□□□ -0.18
Cx3cl1O35188 Trnt1-201ENSMUST00000057578 2283 ntAPPRIS P1 TSL 1 (best) BASIC13.91□□□□□ -0.18
Cx3cl1O35188 Hoxa13-202ENSMUST00000114416 769 ntTSL 1 (best) BASIC13.91□□□□□ -0.18
Cx3cl1O35188 Gm26768-201ENSMUST00000181097 966 ntTSL 5 BASIC13.91□□□□□ -0.18
Retrieved 100 of 76,532 protein–RNA pairs in 38.5 ms