Protein–RNA interactions for Protein: O08712

Tnfrsf11b, Tumor necrosis factor receptor superfamily member 11B, mousemouse

Predictions only

Length 401 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Tnfrsf11bO08712 Pdia2-201ENSMUST00000039113 1721 ntAPPRIS P2 TSL 1 (best) BASIC15.06■□□□□ 0
Tnfrsf11bO08712 Ghdc-201ENSMUST00000017891 2462 ntAPPRIS P1 TSL 1 (best) BASIC15.06■□□□□ 0
Tnfrsf11bO08712 Csdc2-201ENSMUST00000038757 2490 ntAPPRIS P1 TSL 1 (best) BASIC15.06■□□□□ 0
Tnfrsf11bO08712 Cbs-201ENSMUST00000067801 2497 ntAPPRIS P4 TSL 1 (best) BASIC15.06■□□□□ 0
Tnfrsf11bO08712 Nfe2l1-201ENSMUST00000081775 4654 ntAPPRIS P3 TSL 1 (best) BASIC15.06■□□□□ 0
Tnfrsf11bO08712 Gm43697-201ENSMUST00000199637 2581 ntBASIC15.06■□□□□ 0
Tnfrsf11bO08712 Snx8-205ENSMUST00000196566 1914 ntAPPRIS ALT2 TSL 5 BASIC15.06■□□□□ 0
Tnfrsf11bO08712 Lsr-202ENSMUST00000098553 1930 ntTSL 1 (best) BASIC15.06■□□□□ 0
Tnfrsf11bO08712 Neto1-201ENSMUST00000058829 3531 ntAPPRIS P1 TSL 1 (best) BASIC15.06■□□□□ 0
Tnfrsf11bO08712 Zfp57-202ENSMUST00000089968 1991 ntAPPRIS ALT2 TSL 1 (best) BASIC15.06■□□□□ 0
Tnfrsf11bO08712 Cdk18-201ENSMUST00000027697 4355 ntAPPRIS P1 TSL 1 (best) BASIC15.06■□□□□ 0
Tnfrsf11bO08712 Tjp2-201ENSMUST00000099558 4591 ntAPPRIS P1 TSL 1 (best) BASIC15.06■□□□□ 0
Tnfrsf11bO08712 Tomm6os-201ENSMUST00000155812 2944 ntTSL 1 (best) BASIC15.06■□□□□ 0
Tnfrsf11bO08712 Scml4-203ENSMUST00000105495 1033 ntTSL 1 (best) BASIC15.06■□□□□ 0
Tnfrsf11bO08712 Gm12536-201ENSMUST00000129102 358 ntTSL 2 BASIC15.06■□□□□ 0
Tnfrsf11bO08712 Dhrs7c-205ENSMUST00000168612 1108 ntAPPRIS P1 TSL 5 BASIC15.06■□□□□ 0
Tnfrsf11bO08712 C130032M10Rik-201ENSMUST00000180393 728 ntAPPRIS P1 BASIC15.06■□□□□ 0
Tnfrsf11bO08712 Tmem270-202ENSMUST00000201316 847 ntAPPRIS P1 TSL 1 (best) BASIC15.06■□□□□ 0
Tnfrsf11bO08712 Gm38708-201ENSMUST00000203855 677 ntTSL 5 BASIC15.06■□□□□ 0
Tnfrsf11bO08712 AC130671.1-201ENSMUST00000227384 1237 ntBASIC15.06■□□□□ 0
Tnfrsf11bO08712 Mgst3-201ENSMUST00000028005 1097 ntAPPRIS P1 TSL 1 (best) BASIC15.06■□□□□ 0
Tnfrsf11bO08712 Myl12b-201ENSMUST00000038446 1253 ntAPPRIS P1 TSL 1 (best) BASIC15.06■□□□□ 0
Tnfrsf11bO08712 Lancl3-201ENSMUST00000069763 3991 ntAPPRIS P1 TSL 1 (best) BASIC15.06■□□□□ 0
Tnfrsf11bO08712 2010007H06Rik-202ENSMUST00000186025 4934 ntTSL 2 BASIC15.06■□□□□ 0
Tnfrsf11bO08712 Spag1-202ENSMUST00000171205 3219 ntAPPRIS P1 TSL 1 (best) BASIC15.06■□□□□ 0
Tnfrsf11bO08712 Gopc-201ENSMUST00000020008 4216 ntAPPRIS P2 TSL 1 (best) BASIC15.06■□□□□ 0
Tnfrsf11bO08712 Chrna3-202ENSMUST00000214204 2414 ntTSL 1 (best) BASIC15.06■□□□□ 0
Tnfrsf11bO08712 Idh3b-201ENSMUST00000028892 1616 ntAPPRIS P1 TSL 1 (best) BASIC15.06■□□□□ 0
Tnfrsf11bO08712 Rgs3-204ENSMUST00000107420 2752 ntTSL 1 (best) BASIC15.06■□□□□ 0
Tnfrsf11bO08712 Pigv-201ENSMUST00000062118 3979 ntAPPRIS P1 TSL 1 (best) BASIC15.06■□□□□ 0
Tnfrsf11bO08712 AC025913.2-201ENSMUST00000220136 1766 ntBASIC15.06■□□□□ 0
Tnfrsf11bO08712 Csnk1g2-202ENSMUST00000085435 1825 ntAPPRIS P1 TSL 1 (best) BASIC15.06■□□□□ 0
Tnfrsf11bO08712 Cyp2f2-201ENSMUST00000003100 1866 ntAPPRIS P1 TSL 1 (best) BASIC15.06■□□□□ 0
Tnfrsf11bO08712 Serp1-201ENSMUST00000029385 4611 ntAPPRIS P1 TSL 1 (best) BASIC15.05■□□□□ 0
Tnfrsf11bO08712 Myo9b-203ENSMUST00000170242 7297 ntAPPRIS ALT2 TSL 5 BASIC15.05■□□□□ 0
Tnfrsf11bO08712 Ilf2-201ENSMUST00000001042 2027 ntAPPRIS P1 TSL 1 (best) BASIC15.05■□□□□ 0
Tnfrsf11bO08712 Gm4756-202ENSMUST00000208039 2344 ntAPPRIS P1 TSL 5 BASIC15.05■□□□□ 0
Tnfrsf11bO08712 Fam189b-203ENSMUST00000119707 2415 ntTSL 5 BASIC15.05■□□□□ 0
Tnfrsf11bO08712 Pbx3-201ENSMUST00000040638 2587 ntAPPRIS P3 TSL 1 (best) BASIC15.05■□□□□ 0
Tnfrsf11bO08712 Daxx-201ENSMUST00000079421 2580 ntAPPRIS P2 TSL 1 (best) BASIC15.05■□□□□ 0
Tnfrsf11bO08712 Cand2-201ENSMUST00000075995 5474 ntAPPRIS P1 TSL 1 (best) BASIC15.05■□□□□ -0
Tnfrsf11bO08712 Gm6184-201ENSMUST00000120403 1261 ntBASIC15.05■□□□□ -0
Tnfrsf11bO08712 Snx15-207ENSMUST00000154601 767 ntTSL 5 BASIC15.05■□□□□ -0
Tnfrsf11bO08712 Grtp1-201ENSMUST00000165605 1271 ntTSL 1 (best) BASIC15.05■□□□□ -0
Tnfrsf11bO08712 Mir8098-201ENSMUST00000184011 137 ntBASIC15.05■□□□□ -0
Tnfrsf11bO08712 1500015A07Rik-203ENSMUST00000184678 890 ntTSL 1 (best) BASIC15.05■□□□□ -0
Tnfrsf11bO08712 2010010A06Rik-202ENSMUST00000186356 694 ntTSL 1 (best) BASIC15.05■□□□□ -0
Tnfrsf11bO08712 4930458A03Rik-201ENSMUST00000198197 961 ntTSL 1 (best) BASIC15.05■□□□□ -0
Tnfrsf11bO08712 Gm45144-201ENSMUST00000207473 354 ntTSL 5 BASIC15.05■□□□□ -0
Tnfrsf11bO08712 Ndufv2-201ENSMUST00000024909 927 ntTSL 1 (best) BASIC15.05■□□□□ -0
Tnfrsf11bO08712 Ly6d-201ENSMUST00000040404 744 ntAPPRIS P1 TSL 1 (best) BASIC15.05■□□□□ -0
Tnfrsf11bO08712 Cmtm8-201ENSMUST00000047013 1064 ntAPPRIS P1 TSL 1 (best) BASIC15.05■□□□□ -0
Tnfrsf11bO08712 Olfr30-201ENSMUST00000055204 1066 ntAPPRIS P1 BASIC15.05■□□□□ -0
Tnfrsf11bO08712 Klhl9-201ENSMUST00000094993 4174 ntAPPRIS P1 BASIC15.05■□□□□ -0
Tnfrsf11bO08712 Lsp1-203ENSMUST00000105966 1503 ntAPPRIS ALT2 TSL 1 (best) BASIC15.05■□□□□ -0
Tnfrsf11bO08712 Eldr-203ENSMUST00000130392 1540 ntTSL 2 BASIC15.05■□□□□ -0
Tnfrsf11bO08712 Kat8-201ENSMUST00000033070 1579 ntAPPRIS P1 TSL 1 (best) BASIC15.05■□□□□ -0
Tnfrsf11bO08712 Disp2-204ENSMUST00000110846 1732 ntTSL 1 (best) BASIC15.05■□□□□ -0
Tnfrsf11bO08712 Prpf31-202ENSMUST00000108636 1798 ntTSL 5 BASIC15.05■□□□□ -0
Tnfrsf11bO08712 Mfng-201ENSMUST00000018313 1865 ntAPPRIS P1 TSL 1 (best) BASIC15.05■□□□□ -0
Tnfrsf11bO08712 Wdr90-201ENSMUST00000079461 5991 ntAPPRIS P2 TSL 5 BASIC15.05■□□□□ -0
Tnfrsf11bO08712 Gm8237-201ENSMUST00000164484 2051 ntAPPRIS P5 TSL 5 BASIC15.05■□□□□ -0
Tnfrsf11bO08712 Ggn-205ENSMUST00000209019 2148 ntAPPRIS ALT2 TSL 1 (best) BASIC15.05■□□□□ -0
Tnfrsf11bO08712 Qsox1-207ENSMUST00000194632 2433 ntAPPRIS ALT2 TSL 1 (best) BASIC15.05■□□□□ -0
Tnfrsf11bO08712 Ahcy-201ENSMUST00000054607 2543 ntAPPRIS P1 TSL 1 (best) BASIC15.05■□□□□ -0
Tnfrsf11bO08712 Hsp90b1-201ENSMUST00000020238 2825 ntAPPRIS P1 TSL 1 (best) BASIC15.05■□□□□ -0
Tnfrsf11bO08712 Epha1-203ENSMUST00000204357 2948 ntTSL 5 BASIC15.05■□□□□ -0
Tnfrsf11bO08712 Fndc7-201ENSMUST00000053065 3009 ntAPPRIS ALT2 TSL 1 (best) BASIC15.05■□□□□ -0
Tnfrsf11bO08712 Patz1-201ENSMUST00000057089 3118 ntTSL 1 (best) BASIC15.05■□□□□ -0
Tnfrsf11bO08712 Chtf18-201ENSMUST00000048054 3214 ntAPPRIS P1 TSL 1 (best) BASIC15.05■□□□□ -0
Tnfrsf11bO08712 Zbtb14-201ENSMUST00000062369 3625 ntAPPRIS P1 TSL 1 (best) BASIC15.05■□□□□ -0
Tnfrsf11bO08712 Casc4-204ENSMUST00000110586 4032 ntAPPRIS P1 TSL 1 (best) BASIC15.05■□□□□ -0
Tnfrsf11bO08712 Gpt2-201ENSMUST00000034136 3639 ntAPPRIS P1 TSL 1 (best) BASIC15.04■□□□□ -0
Tnfrsf11bO08712 Cers5-202ENSMUST00000109035 2775 ntAPPRIS ALT2 TSL 1 (best) BASIC15.04■□□□□ -0
Tnfrsf11bO08712 Iqce-202ENSMUST00000077890 2494 ntAPPRIS ALT2 TSL 1 (best) BASIC15.04■□□□□ -0
Tnfrsf11bO08712 Pex3-202ENSMUST00000105539 1961 ntTSL 1 (best) BASIC15.04■□□□□ -0
Tnfrsf11bO08712 Jakmip1-212ENSMUST00000174629 1941 ntTSL 5 BASIC15.04■□□□□ -0
Tnfrsf11bO08712 Ppp1r15b-201ENSMUST00000052529 5594 ntAPPRIS P1 TSL 1 (best) BASIC15.04■□□□□ -0
Tnfrsf11bO08712 Gm44645-201ENSMUST00000205492 1653 ntBASIC15.04■□□□□ -0
Tnfrsf11bO08712 Mterf4-202ENSMUST00000112942 1525 ntTSL 2 BASIC15.04■□□□□ -0
Tnfrsf11bO08712 Nkapl-201ENSMUST00000068235 1463 ntAPPRIS P1 BASIC15.04■□□□□ -0
Tnfrsf11bO08712 Ubn2-201ENSMUST00000039127 4243 ntAPPRIS ALT2 TSL 1 (best) BASIC15.04■□□□□ -0
Tnfrsf11bO08712 Lancl1-203ENSMUST00000119559 1385 ntAPPRIS P1 TSL 1 (best) BASIC15.04■□□□□ -0
Tnfrsf11bO08712 Gm13294-201ENSMUST00000121757 1330 ntBASIC15.04■□□□□ -0
Tnfrsf11bO08712 Zfp74-203ENSMUST00000108211 1278 ntTSL 1 (best) BASIC15.04■□□□□ -0
Tnfrsf11bO08712 Trav13-3-201ENSMUST00000117226 336 ntBASIC15.04■□□□□ -0
Tnfrsf11bO08712 Gm13036-201ENSMUST00000117799 748 ntBASIC15.04■□□□□ -0
Tnfrsf11bO08712 Gm15593-201ENSMUST00000122085 1008 ntBASIC15.04■□□□□ -0
Tnfrsf11bO08712 Smco4-202ENSMUST00000178999 820 ntAPPRIS P1 TSL 1 (best) BASIC15.04■□□□□ -0
Tnfrsf11bO08712 Gm5864-201ENSMUST00000202263 970 ntBASIC15.04■□□□□ -0
Tnfrsf11bO08712 Tmem52-201ENSMUST00000023920 932 ntAPPRIS ALT2 TSL 1 (best) BASIC15.04■□□□□ -0
Tnfrsf11bO08712 Smco4-201ENSMUST00000045620 954 ntAPPRIS P1 TSL 1 (best) BASIC15.04■□□□□ -0
Tnfrsf11bO08712 4930431F12Rik-201ENSMUST00000079389 429 ntTSL 5 BASIC15.04■□□□□ -0
Tnfrsf11bO08712 Drd5-201ENSMUST00000041646 3152 ntAPPRIS P1 BASIC15.04■□□□□ -0
Tnfrsf11bO08712 Sema3b-204ENSMUST00000102531 2958 ntAPPRIS P1 TSL 1 (best) BASIC15.04■□□□□ -0
Tnfrsf11bO08712 Tfap2c-201ENSMUST00000030391 2838 ntAPPRIS P1 TSL 1 (best) BASIC15.04■□□□□ -0
Tnfrsf11bO08712 Mapk9-210ENSMUST00000178543 4677 ntAPPRIS ALT1 TSL 5 BASIC15.04■□□□□ -0
Tnfrsf11bO08712 Nck1-202ENSMUST00000116522 4476 ntAPPRIS P1 TSL 1 (best) BASIC15.04■□□□□ -0
Tnfrsf11bO08712 Asb2-201ENSMUST00000021617 2690 ntAPPRIS P2 TSL 1 (best) BASIC15.04■□□□□ -0
Tnfrsf11bO08712 Brix1-201ENSMUST00000022855 2664 ntAPPRIS P1 TSL 1 (best) BASIC15.04■□□□□ -0
Retrieved 100 of 76,532 protein–RNA pairs in 62.2 ms