Protein–RNA interactions for Protein: J3QPE5

Gm5849, Predicted gene 5849, mousemouse

Predictions only

Length 117 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Gm5849J3QPE5 Zscan29-205ENSMUST00000163766 3611 ntAPPRIS ALT2 TSL 5 BASIC12.37□□□□□ -0.43
Gm5849J3QPE5 Ky-201ENSMUST00000039390 5837 ntAPPRIS P1 TSL 1 (best) BASIC12.37□□□□□ -0.43
Gm5849J3QPE5 Slc25a39-202ENSMUST00000107098 1606 ntAPPRIS ALT1 TSL 5 BASIC12.37□□□□□ -0.43
Gm5849J3QPE5 H2-K1-201ENSMUST00000025181 1605 ntAPPRIS P3 TSL 1 (best) BASIC12.37□□□□□ -0.43
Gm5849J3QPE5 Noto-201ENSMUST00000089578 1602 ntAPPRIS P1 TSL 1 (best) BASIC12.37□□□□□ -0.43
Gm5849J3QPE5 Sbk1-201ENSMUST00000056028 4109 ntAPPRIS P1 TSL 1 (best) BASIC12.37□□□□□ -0.43
Gm5849J3QPE5 Prrt3-205ENSMUST00000205170 1903 ntAPPRIS ALT2 TSL 2 BASIC12.37□□□□□ -0.43
Gm5849J3QPE5 Cacna2d2-204ENSMUST00000166799 3474 ntAPPRIS ALT2 TSL 5 BASIC12.37□□□□□ -0.43
Gm5849J3QPE5 Gm9932-201ENSMUST00000194154 2116 ntTSL 1 (best) BASIC12.37□□□□□ -0.43
Gm5849J3QPE5 Lrrc56-202ENSMUST00000070458 2502 ntAPPRIS P3 TSL 1 (best) BASIC12.37□□□□□ -0.43
Gm5849J3QPE5 Pax2-203ENSMUST00000174490 4358 ntAPPRIS P1 TSL 1 (best) BASIC12.37□□□□□ -0.43
Gm5849J3QPE5 Hspa12b-201ENSMUST00000099349 3413 ntAPPRIS P1 TSL 1 (best) BASIC12.37□□□□□ -0.43
Gm5849J3QPE5 Snrnp35-202ENSMUST00000111453 1181 ntAPPRIS P1 TSL 2 BASIC12.37□□□□□ -0.43
Gm5849J3QPE5 Gm12008-201ENSMUST00000117791 755 ntBASIC12.37□□□□□ -0.43
Gm5849J3QPE5 E130218I03Rik-201ENSMUST00000122952 943 ntAPPRIS P1 TSL 1 (best) BASIC12.37□□□□□ -0.43
Gm5849J3QPE5 Ost4-202ENSMUST00000132253 1144 ntAPPRIS P1 TSL 1 (best) BASIC12.37□□□□□ -0.43
Gm5849J3QPE5 Pole4-204ENSMUST00000160281 648 ntAPPRIS ALT1 TSL 1 (best) BASIC12.37□□□□□ -0.43
Gm5849J3QPE5 1700067K01Rik-203ENSMUST00000172548 986 ntAPPRIS P2 TSL 1 (best) BASIC12.37□□□□□ -0.43
Gm5849J3QPE5 Gm42545-201ENSMUST00000202755 922 ntBASIC12.37□□□□□ -0.43
Gm5849J3QPE5 AC163280.1-201ENSMUST00000228194 1100 ntBASIC12.37□□□□□ -0.43
Gm5849J3QPE5 4930412O13Rik-201ENSMUST00000026889 1187 ntAPPRIS P5 TSL 1 (best) BASIC12.37□□□□□ -0.43
Gm5849J3QPE5 Gsto2-201ENSMUST00000056159 1351 ntAPPRIS P1 TSL 1 (best) BASIC12.37□□□□□ -0.43
Gm5849J3QPE5 Lrp8os3-201ENSMUST00000125464 1770 ntTSL 1 (best) BASIC12.37□□□□□ -0.43
Gm5849J3QPE5 Mir22hg-202ENSMUST00000149940 1752 ntTSL 1 (best) BASIC12.37□□□□□ -0.43
Gm5849J3QPE5 Ptgr2-208ENSMUST00000147363 1869 ntTSL 1 (best) BASIC12.37□□□□□ -0.43
Gm5849J3QPE5 Sigirr-201ENSMUST00000097958 1990 ntAPPRIS P2 TSL 1 (best) BASIC12.37□□□□□ -0.43
Gm5849J3QPE5 A130010J15Rik-201ENSMUST00000110831 2257 ntAPPRIS P1 TSL 1 (best) BASIC12.37□□□□□ -0.43
Gm5849J3QPE5 Lingo1-202ENSMUST00000114247 2287 ntTSL 1 (best) BASIC12.37□□□□□ -0.43
Gm5849J3QPE5 Esrrb-202ENSMUST00000110203 2363 ntTSL 1 (best) BASIC12.37□□□□□ -0.43
Gm5849J3QPE5 Ifnar2-202ENSMUST00000089042 2580 ntAPPRIS ALT2 TSL 1 (best) BASIC12.37□□□□□ -0.43
Gm5849J3QPE5 Glud1-201ENSMUST00000022322 3390 ntAPPRIS P1 TSL 1 (best) BASIC12.37□□□□□ -0.43
Gm5849J3QPE5 Ttyh2-201ENSMUST00000045779 3486 ntAPPRIS P1 TSL 1 (best) BASIC12.37□□□□□ -0.43
Gm5849J3QPE5 Zbtb7b-203ENSMUST00000107433 3650 ntAPPRIS P1 TSL 1 (best) BASIC12.37□□□□□ -0.43
Gm5849J3QPE5 AI661453-202ENSMUST00000150819 4866 ntAPPRIS P2 TSL 5 BASIC12.37□□□□□ -0.43
Gm5849J3QPE5 Polr2a-202ENSMUST00000071213 5799 ntTSL 5 BASIC12.37□□□□□ -0.43
Gm5849J3QPE5 Twistnb-201ENSMUST00000020877 4325 ntAPPRIS P1 TSL 1 (best) BASIC12.37□□□□□ -0.43
Gm5849J3QPE5 Txnrd3-201ENSMUST00000000828 2836 ntAPPRIS P1 TSL 1 (best) BASIC12.37□□□□□ -0.43
Gm5849J3QPE5 2410002F23Rik-218ENSMUST00000188382 2301 ntAPPRIS P2 TSL 5 BASIC12.37□□□□□ -0.43
Gm5849J3QPE5 Mindy3-201ENSMUST00000028105 2344 ntAPPRIS P1 TSL 1 (best) BASIC12.37□□□□□ -0.43
Gm5849J3QPE5 Lrrc74b-201ENSMUST00000023442 2135 ntAPPRIS ALT2 TSL 1 (best) BASIC12.37□□□□□ -0.43
Gm5849J3QPE5 Mip-201ENSMUST00000026455 2144 ntAPPRIS P1 TSL 1 (best) BASIC12.37□□□□□ -0.43
Gm5849J3QPE5 Hoxd3os1-202ENSMUST00000139005 1701 ntTSL 1 (best) BASIC12.37□□□□□ -0.43
Gm5849J3QPE5 Prss54-205ENSMUST00000213096 1501 ntAPPRIS P3 TSL 5 BASIC12.37□□□□□ -0.43
Gm5849J3QPE5 Myo16-204ENSMUST00000208309 2462 ntTSL 1 (best) BASIC12.36□□□□□ -0.43
Gm5849J3QPE5 Adprhl1-205ENSMUST00000204916 5228 ntTSL 5 BASIC12.36□□□□□ -0.43
Gm5849J3QPE5 Map3k7cl-201ENSMUST00000026700 1652 ntAPPRIS P1 TSL 1 (best) BASIC12.36□□□□□ -0.43
Gm5849J3QPE5 Smpd3-202ENSMUST00000212896 2626 ntAPPRIS P1 TSL 1 (best) BASIC12.36□□□□□ -0.43
Gm5849J3QPE5 Dmtn-208ENSMUST00000228009 2643 ntAPPRIS P2 BASIC12.36□□□□□ -0.43
Gm5849J3QPE5 Wdr31-203ENSMUST00000120095 2549 ntAPPRIS P3 TSL 1 (best) BASIC12.36□□□□□ -0.43
Gm5849J3QPE5 Scd2-201ENSMUST00000026221 5453 ntAPPRIS P1 TSL 1 (best) BASIC12.36□□□□□ -0.43
Gm5849J3QPE5 Rprm-201ENSMUST00000100089 1460 ntAPPRIS P1 BASIC12.36□□□□□ -0.43
Gm5849J3QPE5 Prss33-201ENSMUST00000059906 1360 ntAPPRIS P1 TSL 1 (best) BASIC12.36□□□□□ -0.43
Gm5849J3QPE5 Hsp25-ps1-201ENSMUST00000109187 630 ntBASIC12.36□□□□□ -0.43
Gm5849J3QPE5 Mbp-207ENSMUST00000114674 2108 ntTSL 1 (best) BASIC12.36□□□□□ -0.43
Gm5849J3QPE5 Snhg6-203ENSMUST00000182580 473 ntTSL 1 (best) BASIC12.36□□□□□ -0.43
Gm5849J3QPE5 Stx6-209ENSMUST00000195302 955 ntTSL 1 (best) BASIC12.36□□□□□ -0.43
Gm5849J3QPE5 Gimap3-202ENSMUST00000204036 2145 ntAPPRIS P1 TSL 1 (best) BASIC12.36□□□□□ -0.43
Gm5849J3QPE5 Gm9731-201ENSMUST00000209480 747 ntBASIC12.36□□□□□ -0.43
Gm5849J3QPE5 Fam167b-201ENSMUST00000052835 913 ntAPPRIS P1 TSL 1 (best) BASIC12.36□□□□□ -0.43
Gm5849J3QPE5 Ly6g6d-201ENSMUST00000007259 546 ntAPPRIS P1 TSL 1 (best) BASIC12.36□□□□□ -0.43
Gm5849J3QPE5 Gzme-201ENSMUST00000089549 916 ntAPPRIS P1 TSL 1 (best) BASIC12.36□□□□□ -0.43
Gm5849J3QPE5 Nab1-205ENSMUST00000186764 3640 ntAPPRIS ALT1 TSL 5 BASIC12.36□□□□□ -0.43
Gm5849J3QPE5 Myh14-203ENSMUST00000107900 6400 ntAPPRIS ALT2 TSL 5 BASIC12.36□□□□□ -0.43
Gm5849J3QPE5 Mettl22-201ENSMUST00000046470 1825 ntAPPRIS P1 TSL 1 (best) BASIC12.36□□□□□ -0.43
Gm5849J3QPE5 Rundc1-201ENSMUST00000040561 3223 ntAPPRIS P1 TSL 1 (best) BASIC12.36□□□□□ -0.43
Gm5849J3QPE5 Ppm1j-201ENSMUST00000002298 1721 ntAPPRIS P1 TSL 1 (best) BASIC12.36□□□□□ -0.43
Gm5849J3QPE5 Slc5a2-202ENSMUST00000118169 2277 ntAPPRIS P1 TSL 1 (best) BASIC12.36□□□□□ -0.43
Gm5849J3QPE5 Troap-201ENSMUST00000039665 2264 ntAPPRIS P1 TSL 1 (best) BASIC12.36□□□□□ -0.43
Gm5849J3QPE5 Sfta3-ps-205ENSMUST00000220379 2187 ntTSL 1 (best) BASIC12.36□□□□□ -0.43
Gm5849J3QPE5 Sp6-202ENSMUST00000107622 3621 ntAPPRIS P1 TSL 1 (best) BASIC12.36□□□□□ -0.43
Gm5849J3QPE5 Adrb3-202ENSMUST00000117565 1336 ntAPPRIS ALT2 TSL 1 (best) BASIC12.36□□□□□ -0.43
Gm5849J3QPE5 Tfap2a-202ENSMUST00000110193 2863 ntAPPRIS P3 TSL 1 (best) BASIC12.36□□□□□ -0.43
Gm5849J3QPE5 Gm853-201ENSMUST00000023884 2314 ntAPPRIS P1 TSL 1 (best) BASIC12.36□□□□□ -0.43
Gm5849J3QPE5 Eif4enif1-213ENSMUST00000179770 3676 ntAPPRIS P1 TSL 1 (best) BASIC12.35□□□□□ -0.43
Gm5849J3QPE5 S1pr3-201ENSMUST00000087978 4463 ntAPPRIS P1 TSL 1 (best) BASIC12.35□□□□□ -0.43
Gm5849J3QPE5 Lmna-203ENSMUST00000120377 2021 ntAPPRIS ALT2 TSL 1 (best) BASIC12.35□□□□□ -0.43
Gm5849J3QPE5 Dars2-201ENSMUST00000035430 3619 ntAPPRIS P1 TSL 1 (best) BASIC12.35□□□□□ -0.43
Gm5849J3QPE5 Rtl6-201ENSMUST00000069476 4426 ntAPPRIS P1 BASIC12.35□□□□□ -0.43
Gm5849J3QPE5 Klc1-202ENSMUST00000118471 2272 ntTSL 1 (best) BASIC12.35□□□□□ -0.43
Gm5849J3QPE5 Muc6-202ENSMUST00000189314 5087 ntAPPRIS ALT2 TSL 1 (best) BASIC12.35□□□□□ -0.43
Gm5849J3QPE5 Gm15648-201ENSMUST00000149681 778 ntTSL 5 BASIC12.35□□□□□ -0.43
Gm5849J3QPE5 4930444P10Rik-203ENSMUST00000151004 1001 ntAPPRIS P2 TSL 3 BASIC12.35□□□□□ -0.43
Gm5849J3QPE5 4930413G21Rik-201ENSMUST00000205998 993 ntBASIC12.35□□□□□ -0.43
Gm5849J3QPE5 AC122769.4-201ENSMUST00000228166 901 ntBASIC12.35□□□□□ -0.43
Gm5849J3QPE5 Bri3-201ENSMUST00000056578 955 ntAPPRIS P1 TSL 1 (best) BASIC12.35□□□□□ -0.43
Gm5849J3QPE5 Mettl13-201ENSMUST00000028017 4541 ntAPPRIS P1 TSL 1 (best) BASIC12.35□□□□□ -0.43
Gm5849J3QPE5 Pigu-201ENSMUST00000077626 1636 ntAPPRIS P2 TSL 1 (best) BASIC12.35□□□□□ -0.43
Gm5849J3QPE5 Plk4-203ENSMUST00000203295 3363 ntAPPRIS ALT2 TSL 1 (best) BASIC12.35□□□□□ -0.43
Gm5849J3QPE5 Fip1l1-201ENSMUST00000080164 4673 ntAPPRIS P3 TSL 1 (best) BASIC12.35□□□□□ -0.43
Gm5849J3QPE5 Gm2420-202ENSMUST00000202224 2249 ntBASIC12.35□□□□□ -0.43
Gm5849J3QPE5 4921514A10Rik-201ENSMUST00000181450 2114 ntTSL 5 BASIC12.35□□□□□ -0.43
Gm5849J3QPE5 Gfod2-201ENSMUST00000013294 4352 ntAPPRIS P1 TSL 1 (best) BASIC12.35□□□□□ -0.43
Gm5849J3QPE5 Tsc22d4-203ENSMUST00000100540 2730 ntTSL 1 (best) BASIC12.35□□□□□ -0.43
Gm5849J3QPE5 Aqp2-201ENSMUST00000023752 1416 ntAPPRIS P1 TSL 1 (best) BASIC12.35□□□□□ -0.43
Gm5849J3QPE5 Cebpd-201ENSMUST00000096232 3746 ntAPPRIS P1 BASIC12.35□□□□□ -0.43
Gm5849J3QPE5 Stk38-202ENSMUST00000119274 1939 ntAPPRIS P1 TSL 1 (best) BASIC12.35□□□□□ -0.43
Gm5849J3QPE5 Gm16582-201ENSMUST00000159627 1930 ntTSL 1 (best) BASIC12.35□□□□□ -0.43
Gm5849J3QPE5 Nphp4-201ENSMUST00000056567 4583 ntAPPRIS P1 TSL 1 (best) BASIC12.35□□□□□ -0.43
Gm5849J3QPE5 4930455H04Rik-201ENSMUST00000117592 1341 ntAPPRIS P1 TSL 1 (best) BASIC12.35□□□□□ -0.43
Gm5849J3QPE5 Etl4-201ENSMUST00000045555 5931 ntAPPRIS ALT2 TSL 1 (best) BASIC12.35□□□□□ -0.43
Retrieved 100 of 76,532 protein–RNA pairs in 33.8 ms