Protein–RNA interactions for Protein: J3QNX5

Shisa8, Cysteine-knot AMPAR-modulating protein 39, mousemouse

Predictions only

Length 399 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Shisa8J3QNX5 Erbb2-201ENSMUST00000058295 5012 ntAPPRIS P1 TSL 1 (best) BASIC13.55□□□□□ -0.24
Shisa8J3QNX5 Slc17a9-201ENSMUST00000094218 2275 ntAPPRIS P1 TSL 5 BASIC13.55□□□□□ -0.24
Shisa8J3QNX5 Olfr317-203ENSMUST00000216196 2781 ntAPPRIS P1 TSL 5 BASIC13.54□□□□□ -0.24
Shisa8J3QNX5 Lrriq4-202ENSMUST00000108267 2387 ntAPPRIS P3 TSL 1 (best) BASIC13.54□□□□□ -0.24
Shisa8J3QNX5 N6amt1-202ENSMUST00000118115 1951 ntTSL 1 (best) BASIC13.54□□□□□ -0.24
Shisa8J3QNX5 Vta1-205ENSMUST00000154132 1974 ntAPPRIS P2 TSL 1 (best) BASIC13.54□□□□□ -0.24
Shisa8J3QNX5 Ankrd10-202ENSMUST00000169782 5156 ntTSL 1 (best) BASIC13.54□□□□□ -0.24
Shisa8J3QNX5 Slc9a3-201ENSMUST00000036208 2490 ntAPPRIS P2 TSL 2 BASIC13.54□□□□□ -0.24
Shisa8J3QNX5 Slc25a25-203ENSMUST00000113307 2541 ntAPPRIS P1 TSL 1 (best) BASIC13.54□□□□□ -0.24
Shisa8J3QNX5 Hnrnpr-204ENSMUST00000131671 2543 ntTSL 1 (best) BASIC13.54□□□□□ -0.24
Shisa8J3QNX5 CT010456.1-201ENSMUST00000222465 1688 ntTSL 5 BASIC13.54□□□□□ -0.24
Shisa8J3QNX5 Cdh7-206ENSMUST00000137092 2681 ntTSL 1 (best) BASIC13.54□□□□□ -0.24
Shisa8J3QNX5 Col5a3-201ENSMUST00000004201 6119 ntAPPRIS P1 TSL 1 (best) BASIC13.54□□□□□ -0.24
Shisa8J3QNX5 Angel2-202ENSMUST00000066632 3714 ntAPPRIS P1 TSL 1 (best) BASIC13.54□□□□□ -0.24
Shisa8J3QNX5 Wnt3a-201ENSMUST00000010044 2761 ntAPPRIS P1 TSL 1 (best) BASIC13.54□□□□□ -0.24
Shisa8J3QNX5 Pld3-201ENSMUST00000117095 2282 ntAPPRIS P1 TSL 1 (best) BASIC13.54□□□□□ -0.24
Shisa8J3QNX5 Prkcz-203ENSMUST00000105624 694 ntTSL 1 (best) BASIC13.54□□□□□ -0.24
Shisa8J3QNX5 Rhno1-202ENSMUST00000112151 1108 ntAPPRIS P1 TSL 1 (best) BASIC13.54□□□□□ -0.24
Shisa8J3QNX5 Zfp629-206ENSMUST00000132524 215 ntTSL 5 BASIC13.54□□□□□ -0.24
Shisa8J3QNX5 Smim22-208ENSMUST00000185147 399 ntAPPRIS ALT2 TSL 2 BASIC13.54□□□□□ -0.24
Shisa8J3QNX5 AC093926.2-201ENSMUST00000214468 1228 ntBASIC13.54□□□□□ -0.24
Shisa8J3QNX5 Gm26709-202ENSMUST00000223049 819 ntTSL 5 BASIC13.54□□□□□ -0.24
Shisa8J3QNX5 Ifi27l2a-201ENSMUST00000055071 463 ntAPPRIS P1 TSL 1 (best) BASIC13.54□□□□□ -0.24
Shisa8J3QNX5 Hist1h2af-201ENSMUST00000073261 399 ntAPPRIS P1 BASIC13.54□□□□□ -0.24
Shisa8J3QNX5 Ccnt2-202ENSMUST00000112570 4511 ntAPPRIS ALT2 TSL 1 (best) BASIC13.54□□□□□ -0.24
Shisa8J3QNX5 Ffar2-202ENSMUST00000163504 1913 ntAPPRIS P1 TSL 2 BASIC13.54□□□□□ -0.24
Shisa8J3QNX5 Necap2-201ENSMUST00000030760 1906 ntAPPRIS P1 TSL 1 (best) BASIC13.54□□□□□ -0.24
Shisa8J3QNX5 Ppp1r12b-209ENSMUST00000168381 3621 ntAPPRIS P2 TSL 1 (best) BASIC13.54□□□□□ -0.24
Shisa8J3QNX5 Fgfr3-210ENSMUST00000169212 4245 ntAPPRIS P4 TSL 1 (best) BASIC13.54□□□□□ -0.24
Shisa8J3QNX5 Fkbp10-201ENSMUST00000001595 2584 ntAPPRIS P1 TSL 1 (best) BASIC13.54□□□□□ -0.24
Shisa8J3QNX5 Gckr-201ENSMUST00000072228 2014 ntAPPRIS P2 TSL 1 (best) BASIC13.54□□□□□ -0.24
Shisa8J3QNX5 Psap-202ENSMUST00000105465 2646 ntAPPRIS ALT2 TSL 1 (best) BASIC13.54□□□□□ -0.24
Shisa8J3QNX5 Aldh1a3-203ENSMUST00000174209 1496 ntTSL 1 (best) BASIC13.54□□□□□ -0.24
Shisa8J3QNX5 Hnf1b-203ENSMUST00000108114 2659 ntTSL 1 (best) BASIC13.54□□□□□ -0.24
Shisa8J3QNX5 Dlgap3-201ENSMUST00000046659 3884 ntAPPRIS P1 TSL 1 (best) BASIC13.54□□□□□ -0.24
Shisa8J3QNX5 Orai2-201ENSMUST00000041048 3908 ntAPPRIS P1 TSL 1 (best) BASIC13.54□□□□□ -0.24
Shisa8J3QNX5 Sh3glb1-201ENSMUST00000163279 3961 ntAPPRIS P1 TSL 1 (best) BASIC13.54□□□□□ -0.24
Shisa8J3QNX5 9330182L06Rik-201ENSMUST00000069538 4688 ntAPPRIS P2 TSL 1 (best) BASIC13.54□□□□□ -0.24
Shisa8J3QNX5 Dmap1-201ENSMUST00000102687 1566 ntAPPRIS P1 TSL 1 (best) BASIC13.54□□□□□ -0.24
Shisa8J3QNX5 Tmco1-204ENSMUST00000195015 1573 ntAPPRIS P1 TSL 1 (best) BASIC13.54□□□□□ -0.24
Shisa8J3QNX5 Pdlim5-212ENSMUST00000200043 1581 ntAPPRIS ALT2 TSL 1 (best) BASIC13.54□□□□□ -0.24
Shisa8J3QNX5 Iqcd-201ENSMUST00000069259 1577 ntAPPRIS ALT2 TSL 1 (best) BASIC13.54□□□□□ -0.24
Shisa8J3QNX5 0610009E02Rik-201ENSMUST00000133463 1609 ntTSL 1 (best) BASIC13.53□□□□□ -0.24
Shisa8J3QNX5 Ceacam16-201ENSMUST00000014830 1635 ntAPPRIS P1 TSL 1 (best) BASIC13.53□□□□□ -0.24
Shisa8J3QNX5 Fam76a-201ENSMUST00000030696 3053 ntAPPRIS P1 TSL 1 (best) BASIC13.53□□□□□ -0.24
Shisa8J3QNX5 Specc1-209ENSMUST00000201671 2523 ntTSL 5 BASIC13.53□□□□□ -0.24
Shisa8J3QNX5 Cdk5r1-201ENSMUST00000053413 4162 ntAPPRIS P1 BASIC13.53□□□□□ -0.24
Shisa8J3QNX5 Dpp3-201ENSMUST00000025851 2683 ntAPPRIS P1 TSL 1 (best) BASIC13.53□□□□□ -0.24
Shisa8J3QNX5 Iqgap1-201ENSMUST00000167377 7444 ntAPPRIS P1 TSL 1 (best) BASIC13.53□□□□□ -0.24
Shisa8J3QNX5 Rb1cc1-201ENSMUST00000027040 7607 ntAPPRIS P1 TSL 1 (best) BASIC13.53□□□□□ -0.24
Shisa8J3QNX5 Adgrb2-206ENSMUST00000106018 4470 ntAPPRIS ALT2 TSL 5 BASIC13.53□□□□□ -0.24
Shisa8J3QNX5 Ccdc27-201ENSMUST00000047207 2089 ntAPPRIS P1 TSL 1 (best) BASIC13.53□□□□□ -0.24
Shisa8J3QNX5 Spint2-202ENSMUST00000108236 1211 ntTSL 1 (best) BASIC13.53□□□□□ -0.24
Shisa8J3QNX5 Mir142hg-201ENSMUST00000123700 269 ntTSL 1 (best) BASIC13.53□□□□□ -0.24
Shisa8J3QNX5 Mrps12-204ENSMUST00000171183 883 ntAPPRIS P1 TSL 2 BASIC13.53□□□□□ -0.24
Shisa8J3QNX5 Gm10499-201ENSMUST00000174094 934 ntBASIC13.53□□□□□ -0.24
Shisa8J3QNX5 Flg-202ENSMUST00000178008 768 ntAPPRIS ALT2 BASIC13.53□□□□□ -0.24
Shisa8J3QNX5 Flg-205ENSMUST00000179250 765 ntAPPRIS ALT2 BASIC13.53□□□□□ -0.24
Shisa8J3QNX5 Flg-206ENSMUST00000179477 768 ntAPPRIS ALT2 BASIC13.53□□□□□ -0.24
Shisa8J3QNX5 Gm26871-202ENSMUST00000180774 695 ntTSL 2 BASIC13.53□□□□□ -0.24
Shisa8J3QNX5 Vsig2-201ENSMUST00000002008 1166 ntAPPRIS P1 TSL 1 (best) BASIC13.53□□□□□ -0.24
Shisa8J3QNX5 Psmg3-201ENSMUST00000031531 883 ntAPPRIS P1 TSL 1 (best) BASIC13.53□□□□□ -0.24
Shisa8J3QNX5 Mrps33-201ENSMUST00000031978 1107 ntAPPRIS P1 TSL 1 (best) BASIC13.53□□□□□ -0.24
Shisa8J3QNX5 A430033K04Rik-201ENSMUST00000032590 1109 ntTSL 5 BASIC13.53□□□□□ -0.24
Shisa8J3QNX5 Sult2b1-201ENSMUST00000075571 1193 ntAPPRIS P2 TSL 1 (best) BASIC13.53□□□□□ -0.24
Shisa8J3QNX5 Gm10313-201ENSMUST00000095320 1002 ntBASIC13.53□□□□□ -0.24
Shisa8J3QNX5 Crybg1-201ENSMUST00000020017 6608 ntAPPRIS P2 TSL 5 BASIC13.53□□□□□ -0.24
Shisa8J3QNX5 Vasp-201ENSMUST00000032561 2215 ntAPPRIS P1 TSL 1 (best) BASIC13.53□□□□□ -0.24
Shisa8J3QNX5 Odf2-203ENSMUST00000113755 2305 ntTSL 1 (best) BASIC13.53□□□□□ -0.24
Shisa8J3QNX5 N4bp3-201ENSMUST00000001080 2367 ntAPPRIS P1 TSL 1 (best) BASIC13.53□□□□□ -0.24
Shisa8J3QNX5 1810008I18Rik-201ENSMUST00000185464 2419 ntBASIC13.53□□□□□ -0.24
Shisa8J3QNX5 Pigg-201ENSMUST00000031189 3427 ntAPPRIS P3 TSL 5 BASIC13.53□□□□□ -0.24
Shisa8J3QNX5 Vps72-201ENSMUST00000009102 1456 ntAPPRIS P1 TSL 1 (best) BASIC13.53□□□□□ -0.24
Shisa8J3QNX5 Ank-201ENSMUST00000022875 3498 ntAPPRIS P1 TSL 1 (best) BASIC13.53□□□□□ -0.24
Shisa8J3QNX5 Tead1-201ENSMUST00000059768 9964 ntAPPRIS P4 TSL 1 (best) BASIC13.53□□□□□ -0.24
Shisa8J3QNX5 Hipk3-202ENSMUST00000111124 4125 ntAPPRIS P1 TSL 5 BASIC13.53□□□□□ -0.24
Shisa8J3QNX5 Zfp574-202ENSMUST00000179556 4140 ntAPPRIS P1 TSL 1 (best) BASIC13.53□□□□□ -0.24
Shisa8J3QNX5 Dctn1-201ENSMUST00000077407 4118 ntAPPRIS ALT2 TSL 1 (best) BASIC13.53□□□□□ -0.24
Shisa8J3QNX5 Adam15-201ENSMUST00000029676 2975 ntAPPRIS P4 TSL 1 (best) BASIC13.53□□□□□ -0.24
Shisa8J3QNX5 Kcnq2-217ENSMUST00000149964 8209 ntAPPRIS P2 TSL 1 (best) BASIC13.53□□□□□ -0.24
Shisa8J3QNX5 3110082I17Rik-204ENSMUST00000198474 2030 ntTSL 2 BASIC13.52□□□□□ -0.24
Shisa8J3QNX5 Gm6297-201ENSMUST00000181475 2146 ntTSL 1 (best) BASIC13.52□□□□□ -0.24
Shisa8J3QNX5 Cald1-201ENSMUST00000031775 2142 ntAPPRIS ALT2 TSL 5 BASIC13.52□□□□□ -0.24
Shisa8J3QNX5 Kpna6-201ENSMUST00000003828 2195 ntAPPRIS ALT1 TSL 5 BASIC13.52□□□□□ -0.24
Shisa8J3QNX5 Zfp318-204ENSMUST00000138127 3936 ntAPPRIS ALT2 TSL 5 BASIC13.52□□□□□ -0.24
Shisa8J3QNX5 Srpx-201ENSMUST00000044789 2477 ntAPPRIS P2 TSL 1 (best) BASIC13.52□□□□□ -0.24
Shisa8J3QNX5 Ppip5k2-201ENSMUST00000042509 5882 ntAPPRIS P2 TSL 1 (best) BASIC13.52□□□□□ -0.24
Shisa8J3QNX5 Fhad1-202ENSMUST00000105779 4263 ntAPPRIS P1 TSL 5 BASIC13.52□□□□□ -0.24
Shisa8J3QNX5 4732463B04Rik-201ENSMUST00000180751 2932 ntTSL 1 (best) BASIC13.52□□□□□ -0.24
Shisa8J3QNX5 Mkrn1-201ENSMUST00000031985 3046 ntAPPRIS P3 TSL 1 (best) BASIC13.52□□□□□ -0.24
Shisa8J3QNX5 Mavs-202ENSMUST00000110199 3057 ntAPPRIS P1 TSL 1 (best) BASIC13.52□□□□□ -0.24
Shisa8J3QNX5 Olfr55-201ENSMUST00000112168 948 ntAPPRIS P1 BASIC13.52□□□□□ -0.25
Shisa8J3QNX5 Mir7071-201ENSMUST00000184847 69 ntBASIC13.52□□□□□ -0.25
Shisa8J3QNX5 Celrr-203ENSMUST00000185678 937 ntTSL 1 (best) BASIC13.52□□□□□ -0.25
Shisa8J3QNX5 Hint1-201ENSMUST00000020504 636 ntAPPRIS P1 TSL 1 (best) BASIC13.52□□□□□ -0.25
Shisa8J3QNX5 Zfp706-204ENSMUST00000226671 447 ntAPPRIS P1 BASIC13.52□□□□□ -0.25
Shisa8J3QNX5 Ank1-201ENSMUST00000033947 1030 ntTSL 1 (best) BASIC13.52□□□□□ -0.25
Shisa8J3QNX5 Cep126-201ENSMUST00000037397 3819 ntAPPRIS P1 TSL 1 (best) BASIC13.52□□□□□ -0.25
Shisa8J3QNX5 Mrpl54-201ENSMUST00000046114 604 ntAPPRIS P1 TSL 1 (best) BASIC13.52□□□□□ -0.25
Shisa8J3QNX5 Rpl36al-201ENSMUST00000054544 526 ntAPPRIS P1 TSL 1 (best) BASIC13.52□□□□□ -0.25
Retrieved 100 of 76,532 protein–RNA pairs in 31.9 ms