Protein–RNA interactions for Protein: J3QNE4

Ccdc180, Coiled-coil domain-containing 180, mousemouse

Predictions only

Length 1,664 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ccdc180J3QNE4 AC153872.1-201ENSMUST00000199539 128 ntBASIC26.67■■□□□ 1.86
Ccdc180J3QNE4 Pla2g2e-201ENSMUST00000030531 854 ntAPPRIS P1 TSL 1 (best) BASIC26.67■■□□□ 1.86
Ccdc180J3QNE4 Fem1c-201ENSMUST00000036226 5726 ntAPPRIS P1 TSL 1 (best) BASIC26.67■■□□□ 1.86
Ccdc180J3QNE4 Asap2-202ENSMUST00000064595 5678 ntAPPRIS P4 TSL 5 BASIC26.67■■□□□ 1.86
Ccdc180J3QNE4 Slc35g3-201ENSMUST00000102586 1618 ntAPPRIS P1 TSL 1 (best) BASIC26.67■■□□□ 1.86
Ccdc180J3QNE4 Zfp385a-201ENSMUST00000168828 2291 ntAPPRIS P1 TSL 1 (best) BASIC26.67■■□□□ 1.86
Ccdc180J3QNE4 Insc-201ENSMUST00000117543 2170 ntAPPRIS P1 TSL 5 BASIC26.67■■□□□ 1.86
Ccdc180J3QNE4 4732440D04Rik-203ENSMUST00000191825 5428 ntBASIC26.66■■□□□ 1.86
Ccdc180J3QNE4 Gm5678-201ENSMUST00000120115 939 ntAPPRIS P1 TSL 5 BASIC26.66■■□□□ 1.86
Ccdc180J3QNE4 Rapgef3os2-201ENSMUST00000124374 920 ntTSL 1 (best) BASIC26.66■■□□□ 1.86
Ccdc180J3QNE4 Cxcl17-202ENSMUST00000200880 760 ntAPPRIS P2 TSL 1 (best) BASIC26.66■■□□□ 1.86
Ccdc180J3QNE4 Prss41-201ENSMUST00000024926 1128 ntAPPRIS P2 TSL 1 (best) BASIC26.66■■□□□ 1.86
Ccdc180J3QNE4 Sh3bgrl3-201ENSMUST00000030651 743 ntAPPRIS P1 TSL 1 (best) BASIC26.66■■□□□ 1.86
Ccdc180J3QNE4 Cxcl17-201ENSMUST00000074040 761 ntAPPRIS ALT2 TSL 5 BASIC26.66■■□□□ 1.86
Ccdc180J3QNE4 Ap2s1-201ENSMUST00000086112 836 ntAPPRIS P1 TSL 1 (best) BASIC26.66■■□□□ 1.86
Ccdc180J3QNE4 Smox-208ENSMUST00000110188 1991 ntTSL 1 (best) BASIC26.66■■□□□ 1.86
Ccdc180J3QNE4 Gm29374-201ENSMUST00000187198 1340 ntTSL 3 BASIC26.66■■□□□ 1.86
Ccdc180J3QNE4 Ythdf3-201ENSMUST00000108345 5102 ntAPPRIS P1 TSL 1 (best) BASIC26.66■■□□□ 1.86
Ccdc180J3QNE4 Clcc1-201ENSMUST00000029483 2224 ntAPPRIS P3 TSL 5 BASIC26.66■■□□□ 1.86
Ccdc180J3QNE4 Wdr70-201ENSMUST00000045766 2126 ntAPPRIS P1 TSL 1 (best) BASIC26.66■■□□□ 1.86
Ccdc180J3QNE4 Pi4k2b-202ENSMUST00000031082 3034 ntAPPRIS ALT2 TSL 2 BASIC26.66■■□□□ 1.86
Ccdc180J3QNE4 Ube2j2-206ENSMUST00000118192 922 ntTSL 5 BASIC26.66■■□□□ 1.86
Ccdc180J3QNE4 Gm11918-201ENSMUST00000121660 179 ntBASIC26.66■■□□□ 1.86
Ccdc180J3QNE4 Gm14617-202ENSMUST00000144208 607 ntTSL 3 BASIC26.66■■□□□ 1.86
Ccdc180J3QNE4 Cenpa-206ENSMUST00000149759 346 ntTSL 3 BASIC26.66■■□□□ 1.86
Ccdc180J3QNE4 Mir7085-201ENSMUST00000184353 66 ntBASIC26.66■■□□□ 1.86
Ccdc180J3QNE4 Trim71-201ENSMUST00000111816 9332 ntAPPRIS P1 TSL 1 (best) BASIC26.66■■□□□ 1.86
Ccdc180J3QNE4 Wee1-201ENSMUST00000033326 3419 ntAPPRIS P1 TSL 1 (best) BASIC26.66■■□□□ 1.86
Ccdc180J3QNE4 Sprn-201ENSMUST00000059241 3374 ntAPPRIS P1 TSL 1 (best) BASIC26.65■■□□□ 1.86
Ccdc180J3QNE4 Mindy1-212ENSMUST00000168223 1812 ntTSL 5 BASIC26.65■■□□□ 1.86
Ccdc180J3QNE4 Tnfaip2-202ENSMUST00000109792 3284 ntAPPRIS ALT2 TSL 1 (best) BASIC26.65■■□□□ 1.86
Ccdc180J3QNE4 Whrn-201ENSMUST00000063650 4016 ntAPPRIS ALT2 TSL 1 (best) BASIC26.65■■□□□ 1.86
Ccdc180J3QNE4 Gm13883-201ENSMUST00000150450 1404 ntTSL 1 (best) BASIC26.65■■□□□ 1.86
Ccdc180J3QNE4 Esrp1-202ENSMUST00000108310 2781 ntAPPRIS P1 TSL 5 BASIC26.65■■□□□ 1.86
Ccdc180J3QNE4 Car10-205ENSMUST00000107861 2613 ntTSL 1 (best) BASIC26.65■■□□□ 1.86
Ccdc180J3QNE4 Ccdc169-203ENSMUST00000118963 740 ntTSL 3 BASIC26.65■■□□□ 1.86
Ccdc180J3QNE4 Gm5279-201ENSMUST00000199575 745 ntBASIC26.65■■□□□ 1.86
Ccdc180J3QNE4 AC158987.1-201ENSMUST00000214586 961 ntTSL 5 BASIC26.65■■□□□ 1.86
Ccdc180J3QNE4 Nubpl-201ENSMUST00000040090 2987 ntAPPRIS P1 TSL 1 (best) BASIC26.65■■□□□ 1.86
Ccdc180J3QNE4 Ccdc169-202ENSMUST00000061099 887 ntAPPRIS P1 TSL 5 BASIC26.65■■□□□ 1.86
Ccdc180J3QNE4 Arrdc5-201ENSMUST00000097303 1054 ntAPPRIS P1 TSL 1 (best) BASIC26.65■■□□□ 1.86
Ccdc180J3QNE4 Scrib-202ENSMUST00000063747 5440 ntAPPRIS ALT2 TSL 1 (best) BASIC26.65■■□□□ 1.86
Ccdc180J3QNE4 Ocel1-203ENSMUST00000110052 5285 ntTSL 1 (best) BASIC26.65■■□□□ 1.86
Ccdc180J3QNE4 Hnrnpll-201ENSMUST00000061331 3116 ntAPPRIS P1 TSL 5 BASIC26.65■■□□□ 1.86
Ccdc180J3QNE4 Slc22a18-201ENSMUST00000052348 1525 ntAPPRIS P1 TSL 1 (best) BASIC26.65■■□□□ 1.86
Ccdc180J3QNE4 Mvp-202ENSMUST00000165096 2837 ntAPPRIS P1 TSL 1 (best) BASIC26.65■■□□□ 1.86
Ccdc180J3QNE4 Snx8-205ENSMUST00000196566 1914 ntAPPRIS ALT2 TSL 5 BASIC26.65■■□□□ 1.86
Ccdc180J3QNE4 Elk4-201ENSMUST00000027696 1586 ntAPPRIS P1 TSL 1 (best) BASIC26.64■■□□□ 1.86
Ccdc180J3QNE4 Tmtc1-201ENSMUST00000060095 8383 ntAPPRIS P1 TSL 1 (best) BASIC26.64■■□□□ 1.86
Ccdc180J3QNE4 Gm12341-201ENSMUST00000119724 503 ntBASIC26.64■■□□□ 1.86
Ccdc180J3QNE4 Tnnt1-208ENSMUST00000166161 750 ntAPPRIS ALT2 TSL 5 BASIC26.64■■□□□ 1.86
Ccdc180J3QNE4 Gm33045-202ENSMUST00000210049 975 ntTSL 5 BASIC26.64■■□□□ 1.86
Ccdc180J3QNE4 AC155286.1-201ENSMUST00000218632 448 ntBASIC26.64■■□□□ 1.86
Ccdc180J3QNE4 AC139580.1-202ENSMUST00000223574 928 ntBASIC26.64■■□□□ 1.86
Ccdc180J3QNE4 AC154806.6-201ENSMUST00000228192 202 ntBASIC26.64■■□□□ 1.86
Ccdc180J3QNE4 Lrwd1-201ENSMUST00000006301 2473 ntAPPRIS P1 TSL 1 (best) BASIC26.64■■□□□ 1.86
Ccdc180J3QNE4 Hacd3-201ENSMUST00000036615 2709 ntAPPRIS P1 TSL 1 (best) BASIC26.64■■□□□ 1.86
Ccdc180J3QNE4 Ank3-223ENSMUST00000182557 1569 ntTSL 1 (best) BASIC26.64■■□□□ 1.85
Ccdc180J3QNE4 Large2-203ENSMUST00000111284 2449 ntAPPRIS ALT2 TSL 5 BASIC26.64■■□□□ 1.85
Ccdc180J3QNE4 Sart3-201ENSMUST00000019118 4447 ntAPPRIS P1 TSL 1 (best) BASIC26.64■■□□□ 1.85
Ccdc180J3QNE4 1600014C10Rik-208ENSMUST00000179525 2326 ntTSL 2 BASIC26.64■■□□□ 1.85
Ccdc180J3QNE4 Ngb-202ENSMUST00000110176 908 ntTSL 3 BASIC26.63■■□□□ 1.85
Ccdc180J3QNE4 Ralb-201ENSMUST00000004565 2289 ntAPPRIS P1 TSL 1 (best) BASIC26.63■■□□□ 1.85
Ccdc180J3QNE4 Atad2b-201ENSMUST00000045664 8035 ntAPPRIS P1 TSL 5 BASIC26.63■■□□□ 1.85
Ccdc180J3QNE4 Ahcyl2-202ENSMUST00000102995 5155 ntAPPRIS ALT1 TSL 5 BASIC26.63■■□□□ 1.85
Ccdc180J3QNE4 Zscan22-204ENSMUST00000120809 1826 ntAPPRIS P1 TSL 1 (best) BASIC26.63■■□□□ 1.85
Ccdc180J3QNE4 Enah-202ENSMUST00000111024 3572 ntAPPRIS ALT2 TSL 5 BASIC26.63■■□□□ 1.85
Ccdc180J3QNE4 Ttll5-204ENSMUST00000110220 2655 ntTSL 1 (best) BASIC26.63■■□□□ 1.85
Ccdc180J3QNE4 Erich6-201ENSMUST00000041115 2195 ntAPPRIS P1 TSL 5 BASIC26.63■■□□□ 1.85
Ccdc180J3QNE4 Sh3bp2-203ENSMUST00000118545 3034 ntAPPRIS ALT2 TSL 1 (best) BASIC26.63■■□□□ 1.85
Ccdc180J3QNE4 Aen-201ENSMUST00000107421 2007 ntAPPRIS ALT2 TSL 1 (best) BASIC26.63■■□□□ 1.85
Ccdc180J3QNE4 Pde8b-208ENSMUST00000162292 4235 ntAPPRIS P2 TSL 1 (best) BASIC26.63■■□□□ 1.85
Ccdc180J3QNE4 Gm15460-201ENSMUST00000118147 391 ntBASIC26.63■■□□□ 1.85
Ccdc180J3QNE4 Mir1894-201ENSMUST00000122802 81 ntBASIC26.63■■□□□ 1.85
Ccdc180J3QNE4 Atcayos-202ENSMUST00000129950 1117 ntTSL 1 (best) BASIC26.63■■□□□ 1.85
Ccdc180J3QNE4 Gm16000-201ENSMUST00000146657 447 ntTSL 2 BASIC26.63■■□□□ 1.85
Ccdc180J3QNE4 AC121804.3-201ENSMUST00000223420 295 ntBASIC26.63■■□□□ 1.85
Ccdc180J3QNE4 Eftud2-202ENSMUST00000107060 3339 ntTSL 1 (best) BASIC26.63■■□□□ 1.85
Ccdc180J3QNE4 Crat-202ENSMUST00000102854 2160 ntTSL 5 BASIC26.63■■□□□ 1.85
Ccdc180J3QNE4 Tbc1d9-202ENSMUST00000093393 5334 ntAPPRIS P1 TSL 1 (best) BASIC26.62■■□□□ 1.85
Ccdc180J3QNE4 Tatdn2-205ENSMUST00000204753 2645 ntAPPRIS ALT2 TSL 1 (best) BASIC26.62■■□□□ 1.85
Ccdc180J3QNE4 Yes1-205ENSMUST00000202543 2657 ntAPPRIS P1 TSL 1 (best) BASIC26.62■■□□□ 1.85
Ccdc180J3QNE4 Gm36839-201ENSMUST00000222088 2093 ntTSL 5 BASIC26.62■■□□□ 1.85
Ccdc180J3QNE4 Tmem184b-201ENSMUST00000074991 3361 ntAPPRIS P1 TSL 1 (best) BASIC26.62■■□□□ 1.85
Ccdc180J3QNE4 Nxf1-202ENSMUST00000010248 748 ntTSL 1 (best) BASIC26.62■■□□□ 1.85
Ccdc180J3QNE4 Boll-202ENSMUST00000114423 1106 ntTSL 1 (best) BASIC26.62■■□□□ 1.85
Ccdc180J3QNE4 Gm11574-201ENSMUST00000139752 946 ntTSL 5 BASIC26.62■■□□□ 1.85
Ccdc180J3QNE4 Rab10os-207ENSMUST00000179924 823 ntTSL 5 BASIC26.62■■□□□ 1.85
Ccdc180J3QNE4 E430024P14Rik-202ENSMUST00000160177 2050 ntTSL 1 (best) BASIC26.62■■□□□ 1.85
Ccdc180J3QNE4 Ehmt2-204ENSMUST00000114033 3882 ntAPPRIS ALT2 TSL 1 (best) BASIC26.62■■□□□ 1.85
Ccdc180J3QNE4 Gnat1-201ENSMUST00000010205 2328 ntAPPRIS P1 TSL 1 (best) BASIC26.62■■□□□ 1.85
Ccdc180J3QNE4 Ptgs1-201ENSMUST00000062069 2867 ntAPPRIS P1 TSL 1 (best) BASIC26.61■■□□□ 1.85
Ccdc180J3QNE4 Nploc4-202ENSMUST00000103017 4025 ntTSL 1 (best) BASIC26.61■■□□□ 1.85
Ccdc180J3QNE4 Slc25a34-201ENSMUST00000038661 2670 ntAPPRIS P1 TSL 1 (best) BASIC26.61■■□□□ 1.85
Ccdc180J3QNE4 Mbd3-202ENSMUST00000105347 914 ntTSL 2 BASIC26.61■■□□□ 1.85
Ccdc180J3QNE4 Ndufa13-201ENSMUST00000110167 1251 ntAPPRIS P1 TSL 1 (best) BASIC26.61■■□□□ 1.85
Ccdc180J3QNE4 Ube2i-211ENSMUST00000173713 890 ntAPPRIS P1 TSL 1 (best) BASIC26.61■■□□□ 1.85
Ccdc180J3QNE4 AY702102-202ENSMUST00000194651 1173 ntBASIC26.61■■□□□ 1.85
Ccdc180J3QNE4 Gm10461-201ENSMUST00000202073 4786 ntBASIC26.61■■□□□ 1.85
Ccdc180J3QNE4 Hadh-201ENSMUST00000029610 1789 ntAPPRIS P1 TSL 1 (best) BASIC26.61■■□□□ 1.85
Retrieved 100 of 76,532 protein–RNA pairs in 32.7 ms