Protein–RNA interactions for Protein: J3QMG8

Trav13d-3, T cell receptor alpha variable 13D-3 (Fragment), mousemouse

Predictions only

Length 112 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trav13d-3J3QMG8 B3gnt7-201ENSMUST00000113306 2582 ntAPPRIS P1 TSL 1 (best) BASIC13.03□□□□□ -0.32
Trav13d-3J3QMG8 Spred1-201ENSMUST00000028829 6016 ntAPPRIS P1 TSL 1 (best) BASIC13.03□□□□□ -0.32
Trav13d-3J3QMG8 Spns1-202ENSMUST00000119754 2001 ntTSL 5 BASIC13.03□□□□□ -0.32
Trav13d-3J3QMG8 Garem2-201ENSMUST00000058045 3865 ntAPPRIS P1 TSL 5 BASIC13.03□□□□□ -0.32
Trav13d-3J3QMG8 Gm6297-201ENSMUST00000181475 2146 ntTSL 1 (best) BASIC13.03□□□□□ -0.32
Trav13d-3J3QMG8 Ntng2-204ENSMUST00000102873 1593 ntAPPRIS ALT2 TSL 1 (best) BASIC13.03□□□□□ -0.32
Trav13d-3J3QMG8 Mok-202ENSMUST00000070565 1693 ntAPPRIS P1 TSL 1 (best) BASIC13.02□□□□□ -0.32
Trav13d-3J3QMG8 Poc1b-204ENSMUST00000159990 3449 ntTSL 1 (best) BASIC13.02□□□□□ -0.32
Trav13d-3J3QMG8 Tinf2-205ENSMUST00000227842 2001 ntAPPRIS ALT2 BASIC13.02□□□□□ -0.33
Trav13d-3J3QMG8 Clstn1-202ENSMUST00000105691 4459 ntAPPRIS ALT2 TSL 1 (best) BASIC13.02□□□□□ -0.33
Trav13d-3J3QMG8 Aimp2-202ENSMUST00000100483 1073 ntTSL 1 (best) BASIC13.02□□□□□ -0.33
Trav13d-3J3QMG8 E530001F21Rik-201ENSMUST00000120991 730 ntBASIC13.02□□□□□ -0.33
Trav13d-3J3QMG8 Gm27301-201ENSMUST00000184012 127 ntBASIC13.02□□□□□ -0.33
Trav13d-3J3QMG8 Gm8597-201ENSMUST00000191525 1109 ntBASIC13.02□□□□□ -0.33
Trav13d-3J3QMG8 Cmtm3-204ENSMUST00000212081 850 ntAPPRIS P1 TSL 5 BASIC13.02□□□□□ -0.33
Trav13d-3J3QMG8 Gm45747-201ENSMUST00000212203 999 ntBASIC13.02□□□□□ -0.33
Trav13d-3J3QMG8 Pts-206ENSMUST00000214873 511 ntTSL 5 BASIC13.02□□□□□ -0.33
Trav13d-3J3QMG8 AC159295.1-201ENSMUST00000225326 940 ntBASIC13.02□□□□□ -0.33
Trav13d-3J3QMG8 Tspan18-201ENSMUST00000028646 1203 ntAPPRIS P1 TSL 1 (best) BASIC13.02□□□□□ -0.33
Trav13d-3J3QMG8 Aimp2-201ENSMUST00000031613 1185 ntAPPRIS P1 TSL 1 (best) BASIC13.02□□□□□ -0.33
Trav13d-3J3QMG8 Tamm41-201ENSMUST00000032461 1168 ntAPPRIS P1 TSL 1 (best) BASIC13.02□□□□□ -0.33
Trav13d-3J3QMG8 Dars-202ENSMUST00000064309 645 ntTSL 1 (best) BASIC13.02□□□□□ -0.33
Trav13d-3J3QMG8 Thoc7-201ENSMUST00000065865 937 ntAPPRIS P1 TSL 1 (best) BASIC13.02□□□□□ -0.33
Trav13d-3J3QMG8 Slc39a4-201ENSMUST00000073428 2224 ntAPPRIS P1 TSL 1 (best) BASIC13.02□□□□□ -0.33
Trav13d-3J3QMG8 Prickle1-201ENSMUST00000048982 4085 ntAPPRIS P1 TSL 1 (best) BASIC13.02□□□□□ -0.33
Trav13d-3J3QMG8 Fbxl12-205ENSMUST00000140702 1555 ntBASIC13.02□□□□□ -0.33
Trav13d-3J3QMG8 Gm8096-201ENSMUST00000209921 1591 ntBASIC13.02□□□□□ -0.33
Trav13d-3J3QMG8 Uck2-202ENSMUST00000053686 4731 ntAPPRIS P1 TSL 1 (best) BASIC13.02□□□□□ -0.33
Trav13d-3J3QMG8 Lhx5-201ENSMUST00000031591 2689 ntAPPRIS P1 TSL 1 (best) BASIC13.02□□□□□ -0.33
Trav13d-3J3QMG8 Krt74-201ENSMUST00000088018 1648 ntAPPRIS P1 TSL 2 BASIC13.02□□□□□ -0.33
Trav13d-3J3QMG8 Zc3h13-203ENSMUST00000227049 6144 ntAPPRIS ALT2 BASIC13.02□□□□□ -0.33
Trav13d-3J3QMG8 Lmcd1-201ENSMUST00000032376 1730 ntAPPRIS P1 TSL 1 (best) BASIC13.02□□□□□ -0.33
Trav13d-3J3QMG8 Tchp-201ENSMUST00000094441 2882 ntAPPRIS P1 TSL 1 (best) BASIC13.02□□□□□ -0.33
Trav13d-3J3QMG8 Slc35e2-201ENSMUST00000043829 2910 ntAPPRIS P1 TSL 1 (best) BASIC13.02□□□□□ -0.33
Trav13d-3J3QMG8 Acp6-201ENSMUST00000090759 1754 ntAPPRIS P1 TSL 1 (best) BASIC13.02□□□□□ -0.33
Trav13d-3J3QMG8 Paqr9-201ENSMUST00000079597 8367 ntAPPRIS P1 BASIC13.01□□□□□ -0.33
Trav13d-3J3QMG8 Kcnh1-201ENSMUST00000078470 7242 ntAPPRIS P3 TSL 1 (best) BASIC13.01□□□□□ -0.33
Trav13d-3J3QMG8 Fbxl16-201ENSMUST00000045692 3478 ntAPPRIS P1 TSL 5 BASIC13.01□□□□□ -0.33
Trav13d-3J3QMG8 Ctnnb1-201ENSMUST00000007130 3623 ntAPPRIS P1 TSL 1 (best) BASIC13.01□□□□□ -0.33
Trav13d-3J3QMG8 Camsap1-201ENSMUST00000091268 7978 ntAPPRIS ALT2 TSL 5 BASIC13.01□□□□□ -0.33
Trav13d-3J3QMG8 Eif2a-201ENSMUST00000029387 2299 ntAPPRIS P1 TSL 1 (best) BASIC13.01□□□□□ -0.33
Trav13d-3J3QMG8 Fen1-204ENSMUST00000156291 2373 ntAPPRIS P1 TSL 2 BASIC13.01□□□□□ -0.33
Trav13d-3J3QMG8 Trafd1-202ENSMUST00000120784 2425 ntAPPRIS ALT2 TSL 1 (best) BASIC13.01□□□□□ -0.33
Trav13d-3J3QMG8 Gm43509-201ENSMUST00000196551 2594 ntBASIC13.01□□□□□ -0.33
Trav13d-3J3QMG8 Disc1-207ENSMUST00000121953 2676 ntAPPRIS ALT2 TSL 1 (best) BASIC13.01□□□□□ -0.33
Trav13d-3J3QMG8 Ablim3-201ENSMUST00000049378 4532 ntAPPRIS P1 TSL 1 (best) BASIC13.01□□□□□ -0.33
Trav13d-3J3QMG8 Pcdha5-201ENSMUST00000192168 5206 ntAPPRIS P1 TSL 1 (best) BASIC13.01□□□□□ -0.33
Trav13d-3J3QMG8 Slc6a9-201ENSMUST00000030269 3479 ntAPPRIS P1 TSL 1 (best) BASIC13.01□□□□□ -0.33
Trav13d-3J3QMG8 Ralgds-201ENSMUST00000028170 3590 ntAPPRIS P3 TSL 1 (best) BASIC13.01□□□□□ -0.33
Trav13d-3J3QMG8 St6gal2-201ENSMUST00000025000 6066 ntAPPRIS P1 TSL 5 BASIC13.01□□□□□ -0.33
Trav13d-3J3QMG8 Vps25-203ENSMUST00000100414 1220 ntTSL 1 (best) BASIC13.01□□□□□ -0.33
Trav13d-3J3QMG8 Dhdds-203ENSMUST00000105886 1015 ntTSL 5 BASIC13.01□□□□□ -0.33
Trav13d-3J3QMG8 Nnat-202ENSMUST00000109526 1213 ntAPPRIS P4 TSL 1 (best) BASIC13.01□□□□□ -0.33
Trav13d-3J3QMG8 Gm12260-201ENSMUST00000122447 411 ntBASIC13.01□□□□□ -0.33
Trav13d-3J3QMG8 Gm28308-201ENSMUST00000128102 752 ntAPPRIS P1 TSL 3 BASIC13.01□□□□□ -0.33
Trav13d-3J3QMG8 Gm16156-201ENSMUST00000141168 713 ntTSL 3 BASIC13.01□□□□□ -0.33
Trav13d-3J3QMG8 2310061I04Rik-204ENSMUST00000148721 1293 ntAPPRIS P1 TSL 5 BASIC13.01□□□□□ -0.33
Trav13d-3J3QMG8 Gm16026-204ENSMUST00000162652 683 ntBASIC13.01□□□□□ -0.33
Trav13d-3J3QMG8 H2-Bl-211ENSMUST00000195838 1105 ntAPPRIS ALT2 TSL 1 (best) BASIC13.01□□□□□ -0.33
Trav13d-3J3QMG8 Gm44771-201ENSMUST00000206975 626 ntBASIC13.01□□□□□ -0.33
Trav13d-3J3QMG8 Zfp524-203ENSMUST00000209030 1128 ntAPPRIS P1 TSL 5 BASIC13.01□□□□□ -0.33
Trav13d-3J3QMG8 Frmd5-213ENSMUST00000212518 922 ntTSL 5 BASIC13.01□□□□□ -0.33
Trav13d-3J3QMG8 Tpd52l1-202ENSMUST00000213528 969 ntAPPRIS ALT2 TSL 1 (best) BASIC13.01□□□□□ -0.33
Trav13d-3J3QMG8 Ndufb7-201ENSMUST00000036996 623 ntAPPRIS P1 TSL 1 (best) BASIC13.01□□□□□ -0.33
Trav13d-3J3QMG8 Efr3b-201ENSMUST00000111178 6547 ntAPPRIS P1 TSL 1 (best) BASIC13.01□□□□□ -0.33
Trav13d-3J3QMG8 Akirin2-201ENSMUST00000084299 1397 ntAPPRIS P1 TSL 1 (best) BASIC13.01□□□□□ -0.33
Trav13d-3J3QMG8 Slc27a5-202ENSMUST00000120903 1468 ntTSL 1 (best) BASIC13.01□□□□□ -0.33
Trav13d-3J3QMG8 Spsb1-203ENSMUST00000105685 1537 ntAPPRIS P1 TSL 1 (best) BASIC13.01□□□□□ -0.33
Trav13d-3J3QMG8 Guca1b-201ENSMUST00000024774 1668 ntAPPRIS P1 TSL 1 (best) BASIC13.01□□□□□ -0.33
Trav13d-3J3QMG8 Adcy1-201ENSMUST00000020706 12259 ntAPPRIS P1 TSL 2 BASIC13.01□□□□□ -0.33
Trav13d-3J3QMG8 E330009J07Rik-202ENSMUST00000101492 6742 ntAPPRIS P1 TSL 1 (best) BASIC13.01□□□□□ -0.33
Trav13d-3J3QMG8 Zfand3-201ENSMUST00000057897 2617 ntTSL 1 (best) BASIC13.01□□□□□ -0.33
Trav13d-3J3QMG8 Sorbs1-208ENSMUST00000224247 2688 ntAPPRIS ALT2 BASIC13.01□□□□□ -0.33
Trav13d-3J3QMG8 Bsx-201ENSMUST00000067375 2960 ntAPPRIS P1 TSL 1 (best) BASIC13.01□□□□□ -0.33
Trav13d-3J3QMG8 Atp2c2-201ENSMUST00000095171 3222 ntAPPRIS P1 TSL 1 (best) BASIC13.01□□□□□ -0.33
Trav13d-3J3QMG8 Cpeb3-201ENSMUST00000079754 5899 ntAPPRIS P3 TSL 1 (best) BASIC13.01□□□□□ -0.33
Trav13d-3J3QMG8 Phactr2-203ENSMUST00000105545 8556 ntAPPRIS ALT2 TSL 1 (best) BASIC13□□□□□ -0.33
Trav13d-3J3QMG8 Rab22a-201ENSMUST00000029024 7155 ntAPPRIS P1 TSL 1 (best) BASIC13□□□□□ -0.33
Trav13d-3J3QMG8 Lurap1-201ENSMUST00000030469 5742 ntAPPRIS P1 TSL 1 (best) BASIC13□□□□□ -0.33
Trav13d-3J3QMG8 Frmd4b-203ENSMUST00000113355 4913 ntTSL 1 (best) BASIC13□□□□□ -0.33
Trav13d-3J3QMG8 Agbl5-213ENSMUST00000201917 3579 ntAPPRIS ALT2 TSL 1 (best) BASIC13□□□□□ -0.33
Trav13d-3J3QMG8 Sox17-201ENSMUST00000027035 3127 ntAPPRIS P1 TSL 1 (best) BASIC13□□□□□ -0.33
Trav13d-3J3QMG8 Nupl2-201ENSMUST00000049887 2914 ntAPPRIS P1 TSL 1 (best) BASIC13□□□□□ -0.33
Trav13d-3J3QMG8 AI849053-201ENSMUST00000181021 2658 ntTSL 3 BASIC13□□□□□ -0.33
Trav13d-3J3QMG8 Cyp4f37-201ENSMUST00000077639 2642 ntAPPRIS P1 TSL 1 (best) BASIC13□□□□□ -0.33
Trav13d-3J3QMG8 Ablim2-205ENSMUST00000114205 2579 ntAPPRIS ALT2 TSL 5 BASIC13□□□□□ -0.33
Trav13d-3J3QMG8 Klc1-203ENSMUST00000120544 2261 ntAPPRIS ALT1 TSL 5 BASIC13□□□□□ -0.33
Trav13d-3J3QMG8 Bin2-207ENSMUST00000183211 2036 ntAPPRIS P1 TSL 5 BASIC13□□□□□ -0.33
Trav13d-3J3QMG8 Ppp1r8-201ENSMUST00000030702 2037 ntAPPRIS P3 TSL 1 (best) BASIC13□□□□□ -0.33
Trav13d-3J3QMG8 Ubxn11-201ENSMUST00000070246 2014 ntAPPRIS ALT2 TSL 5 BASIC13□□□□□ -0.33
Trav13d-3J3QMG8 Psmd13-201ENSMUST00000026560 1989 ntAPPRIS P1 TSL 1 (best) BASIC13□□□□□ -0.33
Trav13d-3J3QMG8 Zfp57-202ENSMUST00000089968 1991 ntAPPRIS ALT2 TSL 1 (best) BASIC13□□□□□ -0.33
Trav13d-3J3QMG8 Dnaja1-210ENSMUST00000164233 5622 ntAPPRIS P1 TSL 5 BASIC13□□□□□ -0.33
Trav13d-3J3QMG8 Susd3-202ENSMUST00000058196 1418 ntAPPRIS P3 TSL 1 (best) BASIC13□□□□□ -0.33
Trav13d-3J3QMG8 Upk1a-201ENSMUST00000006476 1421 ntAPPRIS P1 TSL 1 (best) BASIC13□□□□□ -0.33
Trav13d-3J3QMG8 Ercc1-201ENSMUST00000003645 1375 ntAPPRIS P1 TSL 1 (best) BASIC13□□□□□ -0.33
Trav13d-3J3QMG8 Echdc2-201ENSMUST00000052999 1307 ntAPPRIS P1 TSL 1 (best) BASIC13□□□□□ -0.33
Trav13d-3J3QMG8 Dlk1-203ENSMUST00000109842 1129 ntTSL 1 (best) BASIC13□□□□□ -0.33
Trav13d-3J3QMG8 Bad-203ENSMUST00000113426 740 ntTSL 5 BASIC13□□□□□ -0.33
Trav13d-3J3QMG8 Gm9385-201ENSMUST00000117563 472 ntBASIC13□□□□□ -0.33
Retrieved 100 of 76,532 protein–RNA pairs in 55.7 ms