Protein–RNA interactions for Protein: F8VQ70

Scaper, S phase cyclin A-associated protein in the ER, mousemouse

Known RBP Predictions only

Length 1,398 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ScaperF8VQ70 Haus1-201ENSMUST00000048192 1004 ntAPPRIS P1 TSL 1 (best) BASIC18.79■□□□□ 0.6
ScaperF8VQ70 Phgr1-201ENSMUST00000061360 538 ntAPPRIS ALT2 TSL 5 BASIC18.79■□□□□ 0.6
ScaperF8VQ70 Ntng1-205ENSMUST00000106575 1620 ntAPPRIS ALT1 TSL 5 BASIC18.79■□□□□ 0.6
ScaperF8VQ70 Ntng1-202ENSMUST00000072596 1620 ntAPPRIS P2 TSL 1 (best) BASIC18.79■□□□□ 0.6
ScaperF8VQ70 Eldr-203ENSMUST00000130392 1540 ntTSL 2 BASIC18.78■□□□□ 0.6
ScaperF8VQ70 Trhde-201ENSMUST00000061632 5714 ntAPPRIS P1 TSL 1 (best) BASIC18.78■□□□□ 0.6
ScaperF8VQ70 Ank1-203ENSMUST00000110688 7206 ntAPPRIS ALT2 TSL 1 (best) BASIC18.78■□□□□ 0.6
ScaperF8VQ70 Lamp2-201ENSMUST00000016678 1769 ntAPPRIS ALT2 TSL 1 (best) BASIC18.78■□□□□ 0.6
ScaperF8VQ70 Elovl1-207ENSMUST00000167636 1340 ntAPPRIS P1 TSL 1 (best) BASIC18.78■□□□□ 0.6
ScaperF8VQ70 Dlgap4-204ENSMUST00000109566 1595 ntAPPRIS ALT2 TSL 1 (best) BASIC18.78■□□□□ 0.6
ScaperF8VQ70 8030474K03Rik-202ENSMUST00000151231 1940 ntAPPRIS P1 TSL 5 BASIC18.78■□□□□ 0.6
ScaperF8VQ70 Ptgs1-201ENSMUST00000062069 2867 ntAPPRIS P1 TSL 1 (best) BASIC18.78■□□□□ 0.6
ScaperF8VQ70 Large2-203ENSMUST00000111284 2449 ntAPPRIS ALT2 TSL 5 BASIC18.78■□□□□ 0.6
ScaperF8VQ70 Tmem161a-214ENSMUST00000182980 2080 ntTSL 1 (best) BASIC18.78■□□□□ 0.6
ScaperF8VQ70 Fbxo34-201ENSMUST00000043112 2937 ntAPPRIS P3 TSL 1 (best) BASIC18.78■□□□□ 0.6
ScaperF8VQ70 Taf10-203ENSMUST00000141116 4281 ntAPPRIS P1 TSL 1 (best) BASIC18.78■□□□□ 0.6
ScaperF8VQ70 Gm6473-201ENSMUST00000188572 1210 ntBASIC18.78■□□□□ 0.6
ScaperF8VQ70 Epo-201ENSMUST00000031723 715 ntAPPRIS P3 TSL 1 (best) BASIC18.78■□□□□ 0.6
ScaperF8VQ70 Olfr324-201ENSMUST00000054683 1122 ntAPPRIS P2 BASIC18.78■□□□□ 0.6
ScaperF8VQ70 Chn1-203ENSMUST00000112024 4050 ntAPPRIS P1 TSL 1 (best) BASIC18.78■□□□□ 0.6
ScaperF8VQ70 Chn1-210ENSMUST00000180045 4050 ntTSL 1 (best) BASIC18.78■□□□□ 0.6
ScaperF8VQ70 Kif12-201ENSMUST00000030042 2250 ntAPPRIS P2 TSL 1 (best) BASIC18.78■□□□□ 0.6
ScaperF8VQ70 1700022A21Rik-202ENSMUST00000182910 1448 ntTSL 1 (best) BASIC18.78■□□□□ 0.6
ScaperF8VQ70 Dlx4os-201ENSMUST00000156477 1664 ntTSL 1 (best) BASIC18.78■□□□□ 0.6
ScaperF8VQ70 Cct7-201ENSMUST00000032078 2441 ntAPPRIS P1 TSL 1 (best) BASIC18.78■□□□□ 0.6
ScaperF8VQ70 Mdm1-208ENSMUST00000219087 1318 ntTSL 2 BASIC18.77■□□□□ 0.6
ScaperF8VQ70 Tmem199-201ENSMUST00000052566 1347 ntAPPRIS P1 TSL 1 (best) BASIC18.77■□□□□ 0.6
ScaperF8VQ70 Rnf25-201ENSMUST00000027357 1479 ntAPPRIS P3 TSL 1 (best) BASIC18.77■□□□□ 0.6
ScaperF8VQ70 Anks1b-202ENSMUST00000099366 2549 ntTSL 5 BASIC18.77■□□□□ 0.6
ScaperF8VQ70 Tom1l2-205ENSMUST00000102682 2256 ntTSL 1 (best) BASIC18.77■□□□□ 0.6
ScaperF8VQ70 Egfl7-212ENSMUST00000166920 1391 ntAPPRIS P4 TSL 1 (best) BASIC18.77■□□□□ 0.6
ScaperF8VQ70 Ccdc181-201ENSMUST00000027867 1909 ntAPPRIS P1 TSL 1 (best) BASIC18.77■□□□□ 0.6
ScaperF8VQ70 Fam219a-201ENSMUST00000108049 3296 ntTSL 1 (best) BASIC18.77■□□□□ 0.6
ScaperF8VQ70 A530058N18Rik-202ENSMUST00000134129 411 ntTSL 3 BASIC18.77■□□□□ 0.6
ScaperF8VQ70 Gm20444-201ENSMUST00000174014 648 ntTSL 3 BASIC18.77■□□□□ 0.6
ScaperF8VQ70 A330069E16Rik-201ENSMUST00000181191 887 ntTSL 1 (best) BASIC18.77■□□□□ 0.6
ScaperF8VQ70 Eda-205ENSMUST00000113778 4942 ntAPPRIS ALT2 TSL 1 (best) BASIC18.77■□□□□ 0.59
ScaperF8VQ70 Eda-207ENSMUST00000113780 4915 ntTSL 1 (best) BASIC18.77■□□□□ 0.59
ScaperF8VQ70 Eda-208ENSMUST00000113781 4915 ntTSL 1 (best) BASIC18.77■□□□□ 0.59
ScaperF8VQ70 Nop56-202ENSMUST00000103198 1877 ntAPPRIS P1 TSL 1 (best) BASIC18.77■□□□□ 0.59
ScaperF8VQ70 Srpx-203ENSMUST00000115544 1865 ntAPPRIS ALT2 TSL 1 (best) BASIC18.77■□□□□ 0.59
ScaperF8VQ70 Pqlc1-204ENSMUST00000129043 1864 ntAPPRIS ALT2 TSL 1 (best) BASIC18.77■□□□□ 0.59
ScaperF8VQ70 Rfc5-201ENSMUST00000086461 2796 ntAPPRIS P1 TSL 1 (best) BASIC18.76■□□□□ 0.59
ScaperF8VQ70 Rell1-204ENSMUST00000154169 3241 ntAPPRIS P1 TSL 1 (best) BASIC18.76■□□□□ 0.59
ScaperF8VQ70 Prrt2-201ENSMUST00000159916 2501 ntAPPRIS P1 TSL 5 BASIC18.76■□□□□ 0.59
ScaperF8VQ70 Hhat-201ENSMUST00000044190 2839 ntAPPRIS P2 TSL 1 (best) BASIC18.76■□□□□ 0.59
ScaperF8VQ70 Rgl1-201ENSMUST00000027760 4572 ntTSL 1 (best) BASIC18.76■□□□□ 0.59
ScaperF8VQ70 Atp2b2-201ENSMUST00000089003 7067 ntAPPRIS P3 TSL 1 (best) BASIC18.76■□□□□ 0.59
ScaperF8VQ70 Wdr1-205ENSMUST00000201260 2139 ntTSL 1 (best) BASIC18.76■□□□□ 0.59
ScaperF8VQ70 Dnajc2-203ENSMUST00000115193 2416 ntTSL 1 (best) BASIC18.76■□□□□ 0.59
ScaperF8VQ70 Gm11555-202ENSMUST00000104929 638 ntAPPRIS P1 BASIC18.76■□□□□ 0.59
ScaperF8VQ70 Slc22a18-202ENSMUST00000105917 1552 ntAPPRIS P1 TSL 1 (best) BASIC18.76■□□□□ 0.59
ScaperF8VQ70 Sybu-203ENSMUST00000110269 2920 ntAPPRIS ALT2 TSL 1 (best) BASIC18.76■□□□□ 0.59
ScaperF8VQ70 Ntan1-202ENSMUST00000115805 984 ntTSL 3 BASIC18.76■□□□□ 0.59
ScaperF8VQ70 Cd209f-202ENSMUST00000138439 1165 ntAPPRIS ALT2 TSL 1 (best) BASIC18.76■□□□□ 0.59
ScaperF8VQ70 Cd209f-203ENSMUST00000145007 1186 ntAPPRIS P2 TSL 1 (best) BASIC18.76■□□□□ 0.59
ScaperF8VQ70 Nfya-206ENSMUST00000160319 1407 ntTSL 5 BASIC18.76■□□□□ 0.59
ScaperF8VQ70 1010001B22Rik-201ENSMUST00000181488 589 ntTSL 1 (best) BASIC18.76■□□□□ 0.59
ScaperF8VQ70 Gm26808-201ENSMUST00000181569 411 ntTSL 1 (best) BASIC18.76■□□□□ 0.59
ScaperF8VQ70 Tm2d3-207ENSMUST00000206517 905 ntAPPRIS ALT2 TSL 5 BASIC18.76■□□□□ 0.59
ScaperF8VQ70 Gm7775-201ENSMUST00000218871 853 ntBASIC18.76■□□□□ 0.59
ScaperF8VQ70 AC154412.1-201ENSMUST00000226540 2786 ntBASIC18.76■□□□□ 0.59
ScaperF8VQ70 Gstp2-201ENSMUST00000042700 770 ntAPPRIS P1 TSL 1 (best) BASIC18.76■□□□□ 0.59
ScaperF8VQ70 Krtap19-3-201ENSMUST00000075284 526 ntAPPRIS P1 BASIC18.76■□□□□ 0.59
ScaperF8VQ70 Zmat5-201ENSMUST00000009220 792 ntAPPRIS P1 TSL 1 (best) BASIC18.76■□□□□ 0.59
ScaperF8VQ70 Ebag9-202ENSMUST00000226165 1931 ntAPPRIS P1 BASIC18.76■□□□□ 0.59
ScaperF8VQ70 Zfp553-201ENSMUST00000056232 3043 ntAPPRIS P1 TSL 1 (best) BASIC18.76■□□□□ 0.59
ScaperF8VQ70 Atat1-203ENSMUST00000077494 1340 ntAPPRIS ALT2 TSL 1 (best) BASIC18.76■□□□□ 0.59
ScaperF8VQ70 Tmprss12-201ENSMUST00000096200 1349 ntAPPRIS P1 TSL 1 (best) BASIC18.76■□□□□ 0.59
ScaperF8VQ70 Jph4-201ENSMUST00000022819 4489 ntAPPRIS P1 TSL 1 (best) BASIC18.76■□□□□ 0.59
ScaperF8VQ70 Pacs1-201ENSMUST00000025786 4339 ntAPPRIS P1 TSL 1 (best) BASIC18.76■□□□□ 0.59
ScaperF8VQ70 Rxrg-203ENSMUST00000111384 1967 ntAPPRIS P1 TSL 5 BASIC18.75■□□□□ 0.59
ScaperF8VQ70 G2e3-202ENSMUST00000119211 2926 ntAPPRIS ALT2 TSL 1 (best) BASIC18.75■□□□□ 0.59
ScaperF8VQ70 Stra8-201ENSMUST00000031876 1803 ntAPPRIS P2 TSL 1 (best) BASIC18.75■□□□□ 0.59
ScaperF8VQ70 Pde4d-207ENSMUST00000120664 4207 ntTSL 1 (best) BASIC18.75■□□□□ 0.59
ScaperF8VQ70 Sirt5-206ENSMUST00000221481 1548 ntTSL 5 BASIC18.75■□□□□ 0.59
ScaperF8VQ70 Catip-204ENSMUST00000191010 1866 ntAPPRIS ALT2 TSL 1 (best) BASIC18.75■□□□□ 0.59
ScaperF8VQ70 Ctnna2-205ENSMUST00000161846 4018 ntTSL 1 (best) BASIC18.75■□□□□ 0.59
ScaperF8VQ70 Cstf2-201ENSMUST00000033609 4502 ntAPPRIS P1 TSL 1 (best) BASIC18.75■□□□□ 0.59
ScaperF8VQ70 Pgm2l1-202ENSMUST00000084935 8834 ntAPPRIS P1 TSL 1 (best) BASIC18.75■□□□□ 0.59
ScaperF8VQ70 Rexo4-201ENSMUST00000064244 2281 ntAPPRIS ALT2 TSL 1 (best) BASIC18.75■□□□□ 0.59
ScaperF8VQ70 Bcor-202ENSMUST00000065143 6839 ntAPPRIS P4 TSL 1 (best) BASIC18.75■□□□□ 0.59
ScaperF8VQ70 Rgs19-203ENSMUST00000108771 1110 ntTSL 1 (best) BASIC18.75■□□□□ 0.59
ScaperF8VQ70 Rgs19-205ENSMUST00000108776 1216 ntAPPRIS P1 TSL 1 (best) BASIC18.75■□□□□ 0.59
ScaperF8VQ70 Zfp125-202ENSMUST00000144811 704 ntTSL 5 BASIC18.75■□□□□ 0.59
ScaperF8VQ70 2810408I11Rik-202ENSMUST00000150749 711 ntTSL 1 (best) BASIC18.75■□□□□ 0.59
ScaperF8VQ70 Gm16026-204ENSMUST00000162652 683 ntBASIC18.75■□□□□ 0.59
ScaperF8VQ70 Bcl2l14-206ENSMUST00000163589 2131 ntAPPRIS P1 TSL 5 BASIC18.75■□□□□ 0.59
ScaperF8VQ70 Gm43691-201ENSMUST00000196625 697 ntTSL 1 (best) BASIC18.75■□□□□ 0.59
ScaperF8VQ70 Nup37-201ENSMUST00000052355 1267 ntAPPRIS P1 TSL 1 (best) BASIC18.75■□□□□ 0.59
ScaperF8VQ70 Slc45a4-204ENSMUST00000132607 2457 ntTSL 1 (best) BASIC18.75■□□□□ 0.59
ScaperF8VQ70 Hdgfl1-201ENSMUST00000055915 1993 ntAPPRIS P1 BASIC18.75■□□□□ 0.59
ScaperF8VQ70 Acbd5-204ENSMUST00000114529 3630 ntAPPRIS ALT2 TSL 1 (best) BASIC18.75■□□□□ 0.59
ScaperF8VQ70 Irgc1-201ENSMUST00000080594 1737 ntAPPRIS P1 TSL 1 (best) BASIC18.75■□□□□ 0.59
ScaperF8VQ70 Arhgap42-201ENSMUST00000093893 6116 ntAPPRIS P1 TSL 1 (best) BASIC18.74■□□□□ 0.59
ScaperF8VQ70 Abl1-202ENSMUST00000075759 6327 ntAPPRIS ALT2 TSL 1 (best) BASIC18.74■□□□□ 0.59
ScaperF8VQ70 Zbtb11-201ENSMUST00000050248 4920 ntAPPRIS P1 TSL 5 BASIC18.74■□□□□ 0.59
ScaperF8VQ70 Cryzl1-201ENSMUST00000073466 1965 ntTSL 1 (best) BASIC18.74■□□□□ 0.59
ScaperF8VQ70 Eif2b2-201ENSMUST00000004910 1605 ntAPPRIS P1 TSL 1 (best) BASIC18.74■□□□□ 0.59
ScaperF8VQ70 Ppm1m-201ENSMUST00000076258 1811 ntTSL 1 (best) BASIC18.74■□□□□ 0.59
Retrieved 100 of 76,532 protein–RNA pairs in 26.5 ms