Protein–RNA interactions for Protein: F7BJK1

Pcdh1, Protocadherin 1 (Fragment), mousemouse

Predictions only

Length 1,077 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Pcdh1F7BJK1 Olfr571-201ENSMUST00000061738 969 ntAPPRIS P1 BASIC13.36□□□□□ -0.27
Pcdh1F7BJK1 Ydjc-201ENSMUST00000069064 1297 ntAPPRIS P1 TSL 1 (best) BASIC13.36□□□□□ -0.27
Pcdh1F7BJK1 Methig1-201ENSMUST00000075675 1029 ntAPPRIS P1 TSL 1 (best) BASIC13.36□□□□□ -0.27
Pcdh1F7BJK1 Ifi27-204ENSMUST00000079294 963 ntAPPRIS ALT2 TSL 1 (best) BASIC13.36□□□□□ -0.27
Pcdh1F7BJK1 Aim2-202ENSMUST00000147604 2839 ntAPPRIS P1 TSL 5 BASIC13.36□□□□□ -0.27
Pcdh1F7BJK1 Midn-201ENSMUST00000042057 3727 ntAPPRIS P3 TSL 1 (best) BASIC13.36□□□□□ -0.27
Pcdh1F7BJK1 Tle3-210ENSMUST00000161207 2592 ntTSL 5 BASIC13.36□□□□□ -0.27
Pcdh1F7BJK1 Btbd10-201ENSMUST00000047091 2581 ntAPPRIS P2 TSL 1 (best) BASIC13.36□□□□□ -0.27
Pcdh1F7BJK1 Capn7-201ENSMUST00000022451 3648 ntAPPRIS P1 TSL 1 (best) BASIC13.36□□□□□ -0.27
Pcdh1F7BJK1 Desi2-201ENSMUST00000027783 8802 ntAPPRIS P1 TSL 1 (best) BASIC13.36□□□□□ -0.27
Pcdh1F7BJK1 Srpx-201ENSMUST00000044789 2477 ntAPPRIS P2 TSL 1 (best) BASIC13.36□□□□□ -0.27
Pcdh1F7BJK1 Os9-201ENSMUST00000080975 2458 ntAPPRIS P3 TSL 1 (best) BASIC13.36□□□□□ -0.27
Pcdh1F7BJK1 Opn5-201ENSMUST00000068355 1824 ntAPPRIS P1 TSL 1 (best) BASIC13.36□□□□□ -0.27
Pcdh1F7BJK1 Etl4-208ENSMUST00000114614 5898 ntAPPRIS ALT2 TSL 1 (best) BASIC13.36□□□□□ -0.27
Pcdh1F7BJK1 Gpsm3-201ENSMUST00000038244 1343 ntAPPRIS P1 TSL 1 (best) BASIC13.36□□□□□ -0.27
Pcdh1F7BJK1 Rsrp1-201ENSMUST00000078084 1749 ntAPPRIS P1 TSL 1 (best) BASIC13.36□□□□□ -0.27
Pcdh1F7BJK1 Itfg1-201ENSMUST00000034140 3306 ntAPPRIS P1 TSL 1 (best) BASIC13.36□□□□□ -0.27
Pcdh1F7BJK1 Fkbp10-202ENSMUST00000107400 1467 ntTSL 5 BASIC13.36□□□□□ -0.27
Pcdh1F7BJK1 Myo9b-203ENSMUST00000170242 7297 ntAPPRIS ALT2 TSL 5 BASIC13.35□□□□□ -0.27
Pcdh1F7BJK1 Cdkn2aip-202ENSMUST00000212175 3393 ntAPPRIS P2 TSL 1 (best) BASIC13.35□□□□□ -0.27
Pcdh1F7BJK1 Atp6v0d1-201ENSMUST00000013304 1629 ntAPPRIS P1 TSL 1 (best) BASIC13.35□□□□□ -0.27
Pcdh1F7BJK1 Tuft1-203ENSMUST00000196655 2156 ntTSL 5 BASIC13.35□□□□□ -0.27
Pcdh1F7BJK1 Cobl-201ENSMUST00000046755 5615 ntAPPRIS P3 TSL 1 (best) BASIC13.35□□□□□ -0.27
Pcdh1F7BJK1 Slc39a4-201ENSMUST00000073428 2224 ntAPPRIS P1 TSL 1 (best) BASIC13.35□□□□□ -0.27
Pcdh1F7BJK1 Rtkn-202ENSMUST00000087938 3080 ntAPPRIS P3 TSL 1 (best) BASIC13.35□□□□□ -0.27
Pcdh1F7BJK1 Cds1-201ENSMUST00000031273 3924 ntAPPRIS P1 TSL 1 (best) BASIC13.35□□□□□ -0.27
Pcdh1F7BJK1 Mdfi-203ENSMUST00000113280 1281 ntTSL 5 BASIC13.35□□□□□ -0.27
Pcdh1F7BJK1 Gm11453-201ENSMUST00000117318 1007 ntBASIC13.35□□□□□ -0.27
Pcdh1F7BJK1 Gm13403-202ENSMUST00000134271 674 ntTSL 1 (best) BASIC13.35□□□□□ -0.27
Pcdh1F7BJK1 Gm38575-201ENSMUST00000213881 652 ntTSL 2 BASIC13.35□□□□□ -0.27
Pcdh1F7BJK1 AC164567.1-201ENSMUST00000219185 960 ntBASIC13.35□□□□□ -0.27
Pcdh1F7BJK1 Catip-201ENSMUST00000097697 2101 ntAPPRIS P2 TSL 1 (best) BASIC13.35□□□□□ -0.27
Pcdh1F7BJK1 Paox-202ENSMUST00000097967 1024 ntTSL 1 (best) BASIC13.35□□□□□ -0.27
Pcdh1F7BJK1 Adam23-205ENSMUST00000114107 6110 ntAPPRIS ALT2 TSL 5 BASIC13.35□□□□□ -0.27
Pcdh1F7BJK1 Slc22a18-202ENSMUST00000105917 1552 ntAPPRIS P1 TSL 1 (best) BASIC13.35□□□□□ -0.27
Pcdh1F7BJK1 Wwc2-201ENSMUST00000057561 8678 ntAPPRIS P1 TSL 1 (best) BASIC13.35□□□□□ -0.27
Pcdh1F7BJK1 Gckr-201ENSMUST00000072228 2014 ntAPPRIS P2 TSL 1 (best) BASIC13.35□□□□□ -0.27
Pcdh1F7BJK1 Gm43738-201ENSMUST00000200659 2635 ntAPPRIS P1 TSL 5 BASIC13.35□□□□□ -0.27
Pcdh1F7BJK1 Plod2-203ENSMUST00000160359 3663 ntAPPRIS ALT2 TSL 1 (best) BASIC13.35□□□□□ -0.27
Pcdh1F7BJK1 Elp6-205ENSMUST00000199592 1304 ntAPPRIS P1 TSL 1 (best) BASIC13.35□□□□□ -0.27
Pcdh1F7BJK1 Cfap45-201ENSMUST00000085894 1908 ntAPPRIS P1 TSL 1 (best) BASIC13.35□□□□□ -0.27
Pcdh1F7BJK1 Rnf103-203ENSMUST00000114179 2671 ntAPPRIS P1 TSL 5 BASIC13.35□□□□□ -0.27
Pcdh1F7BJK1 Trib1-201ENSMUST00000067543 4330 ntAPPRIS P1 TSL 1 (best) BASIC13.35□□□□□ -0.27
Pcdh1F7BJK1 1700029J07Rik-201ENSMUST00000095323 2740 ntAPPRIS P1 TSL 1 (best) BASIC13.34□□□□□ -0.27
Pcdh1F7BJK1 Cd82-202ENSMUST00000099696 1657 ntAPPRIS P1 TSL 1 (best) BASIC13.34□□□□□ -0.27
Pcdh1F7BJK1 Sept8-202ENSMUST00000117061 4563 ntAPPRIS P3 TSL 1 (best) BASIC13.34□□□□□ -0.27
Pcdh1F7BJK1 Ahsa1-201ENSMUST00000021425 1377 ntAPPRIS P1 TSL 1 (best) BASIC13.34□□□□□ -0.27
Pcdh1F7BJK1 Smarce1-201ENSMUST00000103133 2919 ntAPPRIS P1 TSL 1 (best) BASIC13.34□□□□□ -0.27
Pcdh1F7BJK1 9930104L06Rik-201ENSMUST00000094769 2911 ntTSL 1 (best) BASIC13.34□□□□□ -0.27
Pcdh1F7BJK1 Fam19a4-201ENSMUST00000089295 2190 ntAPPRIS P1 TSL 1 (best) BASIC13.34□□□□□ -0.27
Pcdh1F7BJK1 Ankrd24-201ENSMUST00000119336 3561 ntAPPRIS P1 TSL 5 BASIC13.34□□□□□ -0.27
Pcdh1F7BJK1 Fbxo34-203ENSMUST00000163324 3132 ntAPPRIS ALT2 TSL 2 BASIC13.34□□□□□ -0.27
Pcdh1F7BJK1 H13-202ENSMUST00000089059 1743 ntTSL 1 (best) BASIC13.34□□□□□ -0.27
Pcdh1F7BJK1 Tsn-201ENSMUST00000027623 7063 ntAPPRIS P1 TSL 1 (best) BASIC13.34□□□□□ -0.27
Pcdh1F7BJK1 Slc39a3-202ENSMUST00000117276 3796 ntAPPRIS P1 TSL 1 (best) BASIC13.34□□□□□ -0.27
Pcdh1F7BJK1 Zkscan3-202ENSMUST00000116433 1421 ntTSL 1 (best) BASIC13.34□□□□□ -0.27
Pcdh1F7BJK1 Krtap1-4-201ENSMUST00000100479 593 ntAPPRIS P1 BASIC13.34□□□□□ -0.27
Pcdh1F7BJK1 Gmnn-202ENSMUST00000110382 963 ntAPPRIS P1 TSL 1 (best) BASIC13.34□□□□□ -0.27
Pcdh1F7BJK1 Rasgrp2-205ENSMUST00000113471 535 ntTSL 1 (best) BASIC13.34□□□□□ -0.27
Pcdh1F7BJK1 Gm15952-201ENSMUST00000122858 490 ntTSL 3 BASIC13.34□□□□□ -0.27
Pcdh1F7BJK1 BC022687-202ENSMUST00000177808 1207 ntAPPRIS P1 TSL 1 (best) BASIC13.34□□□□□ -0.27
Pcdh1F7BJK1 Gm21362-201ENSMUST00000194272 928 ntBASIC13.34□□□□□ -0.27
Pcdh1F7BJK1 Gm45631-201ENSMUST00000210318 1244 ntTSL 1 (best) BASIC13.34□□□□□ -0.27
Pcdh1F7BJK1 Gm6296-201ENSMUST00000222599 943 ntBASIC13.34□□□□□ -0.27
Pcdh1F7BJK1 Insl6-201ENSMUST00000052380 708 ntAPPRIS P1 TSL 1 (best) BASIC13.34□□□□□ -0.27
Pcdh1F7BJK1 Comt-202ENSMUST00000115609 1786 ntAPPRIS P1 TSL 1 (best) BASIC13.34□□□□□ -0.27
Pcdh1F7BJK1 Zdhhc7-201ENSMUST00000034280 3069 ntAPPRIS P1 TSL 1 (best) BASIC13.34□□□□□ -0.27
Pcdh1F7BJK1 Aldh1b1-201ENSMUST00000044384 2298 ntAPPRIS P1 TSL 1 (best) BASIC13.34□□□□□ -0.27
Pcdh1F7BJK1 App-204ENSMUST00000227021 3264 ntAPPRIS ALT2 BASIC13.34□□□□□ -0.27
Pcdh1F7BJK1 1110008P14Rik-202ENSMUST00000146423 2618 ntTSL 1 (best) BASIC13.34□□□□□ -0.27
Pcdh1F7BJK1 Cxcr5-201ENSMUST00000062215 2614 ntAPPRIS P1 TSL 1 (best) BASIC13.34□□□□□ -0.27
Pcdh1F7BJK1 Fundc1-201ENSMUST00000026016 1983 ntAPPRIS P1 TSL 1 (best) BASIC13.34□□□□□ -0.27
Pcdh1F7BJK1 Exoc3l-201ENSMUST00000057855 2497 ntAPPRIS P1 TSL 1 (best) BASIC13.34□□□□□ -0.27
Pcdh1F7BJK1 Vav1-201ENSMUST00000005889 2963 ntAPPRIS P3 TSL 1 (best) BASIC13.34□□□□□ -0.27
Pcdh1F7BJK1 Dlx4os-201ENSMUST00000156477 1664 ntTSL 1 (best) BASIC13.34□□□□□ -0.27
Pcdh1F7BJK1 Cspg5-204ENSMUST00000197850 7868 ntAPPRIS ALT2 TSL 5 BASIC13.34□□□□□ -0.27
Pcdh1F7BJK1 Lsm12-202ENSMUST00000107156 2015 ntTSL 5 BASIC13.34□□□□□ -0.27
Pcdh1F7BJK1 Mocos-201ENSMUST00000068006 2884 ntAPPRIS P1 TSL 1 (best) BASIC13.34□□□□□ -0.27
Pcdh1F7BJK1 1700051A21Rik-201ENSMUST00000147937 1516 ntTSL 5 BASIC13.34□□□□□ -0.27
Pcdh1F7BJK1 Gm26882-201ENSMUST00000181611 1537 ntTSL 5 BASIC13.34□□□□□ -0.27
Pcdh1F7BJK1 Clns1a-201ENSMUST00000026506 1504 ntAPPRIS P1 TSL 1 (best) BASIC13.34□□□□□ -0.27
Pcdh1F7BJK1 Arhgef40-220ENSMUST00000182909 5108 ntAPPRIS P4 TSL 5 BASIC13.33□□□□□ -0.27
Pcdh1F7BJK1 Nr2f1-205ENSMUST00000150498 2588 ntTSL 1 (best) BASIC13.33□□□□□ -0.27
Pcdh1F7BJK1 Synm-204ENSMUST00000208231 4457 ntAPPRIS ALT2 TSL 1 (best) BASIC13.33□□□□□ -0.27
Pcdh1F7BJK1 Dnm1-205ENSMUST00000113365 3257 ntAPPRIS ALT1 TSL 5 BASIC13.33□□□□□ -0.27
Pcdh1F7BJK1 Acin1-224ENSMUST00000167015 1746 ntAPPRIS ALT2 TSL 1 (best) BASIC13.33□□□□□ -0.27
Pcdh1F7BJK1 Uba3-201ENSMUST00000089287 2257 ntAPPRIS P4 TSL 1 (best) BASIC13.33□□□□□ -0.28
Pcdh1F7BJK1 Fbxo41-202ENSMUST00000161078 6562 ntAPPRIS P1 TSL 1 (best) BASIC13.33□□□□□ -0.28
Pcdh1F7BJK1 Slc25a34-201ENSMUST00000038661 2670 ntAPPRIS P1 TSL 1 (best) BASIC13.33□□□□□ -0.28
Pcdh1F7BJK1 Atl1-201ENSMUST00000021466 5150 ntAPPRIS P1 TSL 1 (best) BASIC13.33□□□□□ -0.28
Pcdh1F7BJK1 Gm3373-202ENSMUST00000177556 1955 ntAPPRIS P5 TSL 5 BASIC13.33□□□□□ -0.28
Pcdh1F7BJK1 Gm3500-201ENSMUST00000177986 1955 ntAPPRIS P1 TSL 5 BASIC13.33□□□□□ -0.28
Pcdh1F7BJK1 Znhit1-203ENSMUST00000111090 698 ntTSL 2 BASIC13.33□□□□□ -0.28
Pcdh1F7BJK1 Alkal1-201ENSMUST00000133144 971 ntAPPRIS P1 TSL 1 (best) BASIC13.33□□□□□ -0.28
Pcdh1F7BJK1 Blvrb-204ENSMUST00000133750 509 ntTSL 2 BASIC13.33□□□□□ -0.28
Pcdh1F7BJK1 Gm28051-201ENSMUST00000179306 445 ntAPPRIS P1 TSL 2 BASIC13.33□□□□□ -0.28
Pcdh1F7BJK1 Gm18669-201ENSMUST00000216049 778 ntBASIC13.33□□□□□ -0.28
Pcdh1F7BJK1 Gm9857-201ENSMUST00000050914 393 ntAPPRIS P1 BASIC13.33□□□□□ -0.28
Pcdh1F7BJK1 Dupd1-201ENSMUST00000073870 1138 ntAPPRIS P1 TSL 1 (best) BASIC13.33□□□□□ -0.28
Pcdh1F7BJK1 Cldn19-201ENSMUST00000084309 924 ntAPPRIS P4 TSL 1 (best) BASIC13.33□□□□□ -0.28
Retrieved 100 of 76,532 protein–RNA pairs in 36.6 ms