Protein–RNA interactions for Protein: E9Q2N0

Cpsf4l, Cleavage and polyadenylation-specific factor 4-like, mousemouse

Predictions only

Length 280 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Cpsf4lE9Q2N0 Psmg3-202ENSMUST00000182602 733 ntAPPRIS P1 TSL 1 (best) BASIC12.55□□□□□ -0.4
Cpsf4lE9Q2N0 Gm20553-201ENSMUST00000204205 844 ntBASIC12.55□□□□□ -0.4
Cpsf4lE9Q2N0 Pde6g-201ENSMUST00000026452 900 ntAPPRIS P1 TSL 1 (best) BASIC12.55□□□□□ -0.4
Cpsf4lE9Q2N0 Anapc15-202ENSMUST00000035395 836 ntTSL 1 (best) BASIC12.55□□□□□ -0.4
Cpsf4lE9Q2N0 Rhox7a-201ENSMUST00000096454 983 ntAPPRIS P1 TSL 1 (best) BASIC12.55□□□□□ -0.4
Cpsf4lE9Q2N0 Olfr520-201ENSMUST00000098264 951 ntAPPRIS P1 BASIC12.55□□□□□ -0.4
Cpsf4lE9Q2N0 Alas1-207ENSMUST00000141118 3399 ntAPPRIS P2 TSL 5 BASIC12.55□□□□□ -0.4
Cpsf4lE9Q2N0 Nipal2-201ENSMUST00000040791 4331 ntAPPRIS P1 TSL 1 (best) BASIC12.55□□□□□ -0.4
Cpsf4lE9Q2N0 Cdc37l1-204ENSMUST00000224511 2944 ntAPPRIS ALT2 BASIC12.55□□□□□ -0.4
Cpsf4lE9Q2N0 Olah-201ENSMUST00000027955 1533 ntAPPRIS P1 TSL 1 (best) BASIC12.55□□□□□ -0.4
Cpsf4lE9Q2N0 Polr3d-202ENSMUST00000180358 2032 ntAPPRIS P1 TSL 1 (best) BASIC12.55□□□□□ -0.4
Cpsf4lE9Q2N0 Kif12-201ENSMUST00000030042 2250 ntAPPRIS P2 TSL 1 (best) BASIC12.55□□□□□ -0.4
Cpsf4lE9Q2N0 Wdr31-203ENSMUST00000120095 2549 ntAPPRIS P3 TSL 1 (best) BASIC12.55□□□□□ -0.4
Cpsf4lE9Q2N0 Mef2b-204ENSMUST00000110146 1342 ntAPPRIS P3 TSL 1 (best) BASIC12.55□□□□□ -0.4
Cpsf4lE9Q2N0 Map3k14-201ENSMUST00000021324 4246 ntAPPRIS P1 TSL 1 (best) BASIC12.55□□□□□ -0.4
Cpsf4lE9Q2N0 Gjb1-203ENSMUST00000119190 1585 ntAPPRIS P1 TSL 2 BASIC12.55□□□□□ -0.4
Cpsf4lE9Q2N0 Kcnt1-213ENSMUST00000198204 4714 ntAPPRIS ALT2 TSL 5 BASIC12.55□□□□□ -0.4
Cpsf4lE9Q2N0 Rbpms2-202ENSMUST00000169003 1803 ntAPPRIS ALT2 TSL 1 (best) BASIC12.55□□□□□ -0.4
Cpsf4lE9Q2N0 Arf3-201ENSMUST00000053183 3579 ntAPPRIS P1 TSL 1 (best) BASIC12.55□□□□□ -0.4
Cpsf4lE9Q2N0 Ntf3-202ENSMUST00000112244 1399 ntAPPRIS ALT1 TSL 3 BASIC12.55□□□□□ -0.4
Cpsf4lE9Q2N0 Gm20482-201ENSMUST00000172746 1644 ntTSL 1 (best) BASIC12.55□□□□□ -0.4
Cpsf4lE9Q2N0 Lat2-201ENSMUST00000036362 1637 ntAPPRIS P1 TSL 1 (best) BASIC12.55□□□□□ -0.4
Cpsf4lE9Q2N0 Chmp1a-201ENSMUST00000000759 2140 ntAPPRIS P1 TSL 1 (best) BASIC12.55□□□□□ -0.4
Cpsf4lE9Q2N0 Fbxl19-201ENSMUST00000033081 3410 ntAPPRIS P2 TSL 1 (best) BASIC12.55□□□□□ -0.4
Cpsf4lE9Q2N0 Adgrb2-201ENSMUST00000030571 4734 ntAPPRIS ALT2 TSL 5 BASIC12.54□□□□□ -0.4
Cpsf4lE9Q2N0 Zfp639-205ENSMUST00000193287 2211 ntAPPRIS P1 TSL 1 (best) BASIC12.54□□□□□ -0.4
Cpsf4lE9Q2N0 Slc39a4-201ENSMUST00000073428 2224 ntAPPRIS P1 TSL 1 (best) BASIC12.54□□□□□ -0.4
Cpsf4lE9Q2N0 Ipo8-201ENSMUST00000048418 5360 ntAPPRIS P1 TSL 1 (best) BASIC12.54□□□□□ -0.4
Cpsf4lE9Q2N0 Pacs2-201ENSMUST00000084891 5480 ntAPPRIS P2 TSL 5 BASIC12.54□□□□□ -0.4
Cpsf4lE9Q2N0 Pde1c-203ENSMUST00000164037 3068 ntTSL 1 (best) BASIC12.54□□□□□ -0.4
Cpsf4lE9Q2N0 Kcnj8-201ENSMUST00000032374 2269 ntTSL 1 (best) BASIC12.54□□□□□ -0.4
Cpsf4lE9Q2N0 Inha-201ENSMUST00000037330 1475 ntAPPRIS P1 TSL 1 (best) BASIC12.54□□□□□ -0.4
Cpsf4lE9Q2N0 Phyhip-201ENSMUST00000003561 2838 ntAPPRIS P1 TSL 1 (best) BASIC12.54□□□□□ -0.4
Cpsf4lE9Q2N0 Cox16-201ENSMUST00000002757 2007 ntAPPRIS P1 TSL 1 (best) BASIC12.54□□□□□ -0.4
Cpsf4lE9Q2N0 Cgnl1-203ENSMUST00000122065 4487 ntAPPRIS P2 TSL 1 (best) BASIC12.54□□□□□ -0.4
Cpsf4lE9Q2N0 Gm14026-201ENSMUST00000120625 1789 ntBASIC12.54□□□□□ -0.4
Cpsf4lE9Q2N0 Tcf21-202ENSMUST00000218002 1788 ntBASIC12.54□□□□□ -0.4
Cpsf4lE9Q2N0 Daxx-208ENSMUST00000174541 2325 ntAPPRIS ALT2 TSL 5 BASIC12.54□□□□□ -0.4
Cpsf4lE9Q2N0 Rgs6-216ENSMUST00000200911 2626 ntAPPRIS ALT2 TSL 1 (best) BASIC12.54□□□□□ -0.4
Cpsf4lE9Q2N0 Shroom3-203ENSMUST00000113055 6765 ntAPPRIS P1 TSL 1 (best) BASIC12.54□□□□□ -0.4
Cpsf4lE9Q2N0 Syndig1-201ENSMUST00000109934 2081 ntAPPRIS P1 TSL 5 BASIC12.54□□□□□ -0.4
Cpsf4lE9Q2N0 Pimreg-201ENSMUST00000021164 1513 ntAPPRIS P1 TSL 1 (best) BASIC12.54□□□□□ -0.4
Cpsf4lE9Q2N0 Tcf3-206ENSMUST00000105342 2928 ntAPPRIS ALT2 TSL 1 (best) BASIC12.54□□□□□ -0.4
Cpsf4lE9Q2N0 Gm13464-201ENSMUST00000119418 935 ntBASIC12.54□□□□□ -0.4
Cpsf4lE9Q2N0 4930481A15Rik-201ENSMUST00000128542 2106 ntTSL 1 (best) BASIC12.54□□□□□ -0.4
Cpsf4lE9Q2N0 Gm14321-202ENSMUST00000139927 351 ntTSL 5 BASIC12.54□□□□□ -0.4
Cpsf4lE9Q2N0 Ybx1-ps2-201ENSMUST00000201305 957 ntBASIC12.54□□□□□ -0.4
Cpsf4lE9Q2N0 Abhd18-207ENSMUST00000203892 1021 ntTSL 1 (best) BASIC12.54□□□□□ -0.4
Cpsf4lE9Q2N0 Lce1f-201ENSMUST00000047153 728 ntAPPRIS P1 TSL 1 (best) BASIC12.54□□□□□ -0.4
Cpsf4lE9Q2N0 Nutf2-201ENSMUST00000008594 948 ntAPPRIS P1 TSL 1 (best) BASIC12.54□□□□□ -0.4
Cpsf4lE9Q2N0 Gm26688-201ENSMUST00000181176 1568 ntTSL 1 (best) BASIC12.54□□□□□ -0.4
Cpsf4lE9Q2N0 Dnajc1-202ENSMUST00000091418 5070 ntAPPRIS P1 TSL 1 (best) BASIC12.54□□□□□ -0.4
Cpsf4lE9Q2N0 Slc32a1-201ENSMUST00000045738 2797 ntAPPRIS P1 TSL 1 (best) BASIC12.54□□□□□ -0.4
Cpsf4lE9Q2N0 6030408B16Rik-202ENSMUST00000191426 1947 ntAPPRIS P5 TSL 1 (best) BASIC12.54□□□□□ -0.4
Cpsf4lE9Q2N0 Gm10605-202ENSMUST00000183019 3198 ntBASIC12.54□□□□□ -0.4
Cpsf4lE9Q2N0 Eif2a-201ENSMUST00000029387 2299 ntAPPRIS P1 TSL 1 (best) BASIC12.54□□□□□ -0.4
Cpsf4lE9Q2N0 Zfp691-201ENSMUST00000052715 2341 ntAPPRIS P1 TSL 1 (best) BASIC12.54□□□□□ -0.4
Cpsf4lE9Q2N0 Tcf19-202ENSMUST00000160885 1732 ntAPPRIS P1 TSL 1 (best) BASIC12.54□□□□□ -0.4
Cpsf4lE9Q2N0 Gm6297-201ENSMUST00000181475 2146 ntTSL 1 (best) BASIC12.53□□□□□ -0.4
Cpsf4lE9Q2N0 Atg9a-208ENSMUST00000189702 4110 ntAPPRIS P1 TSL 5 BASIC12.53□□□□□ -0.4
Cpsf4lE9Q2N0 Pitpnm1-202ENSMUST00000100022 4512 ntAPPRIS P1 TSL 1 (best) BASIC12.53□□□□□ -0.4
Cpsf4lE9Q2N0 Rgs6-203ENSMUST00000185665 2201 ntAPPRIS P4 TSL 5 BASIC12.53□□□□□ -0.4
Cpsf4lE9Q2N0 Poli-201ENSMUST00000043286 2591 ntTSL 1 (best) BASIC12.53□□□□□ -0.4
Cpsf4lE9Q2N0 Washc1-201ENSMUST00000072383 2904 ntAPPRIS P1 TSL 1 (best) BASIC12.53□□□□□ -0.4
Cpsf4lE9Q2N0 Foxp1-208ENSMUST00000113329 1926 ntTSL 1 (best) BASIC12.53□□□□□ -0.4
Cpsf4lE9Q2N0 Rxrb-202ENSMUST00000116612 2283 ntAPPRIS ALT2 TSL 1 (best) BASIC12.53□□□□□ -0.4
Cpsf4lE9Q2N0 Fbxo15-204ENSMUST00000224467 1908 ntAPPRIS ALT2 BASIC12.53□□□□□ -0.4
Cpsf4lE9Q2N0 Gm16201-202ENSMUST00000139218 2330 ntTSL 1 (best) BASIC12.53□□□□□ -0.4
Cpsf4lE9Q2N0 Sgpl1-202ENSMUST00000122259 4102 ntAPPRIS P1 TSL 1 (best) BASIC12.53□□□□□ -0.4
Cpsf4lE9Q2N0 Hsph1-209ENSMUST00000202089 3054 ntTSL 5 BASIC12.53□□□□□ -0.4
Cpsf4lE9Q2N0 Nup62-205ENSMUST00000208626 2708 ntAPPRIS P1 TSL 5 BASIC12.53□□□□□ -0.4
Cpsf4lE9Q2N0 Nup62-201ENSMUST00000057195 2722 ntAPPRIS P1 TSL 1 (best) BASIC12.53□□□□□ -0.4
Cpsf4lE9Q2N0 Commd5-202ENSMUST00000109793 920 ntAPPRIS P1 TSL 5 BASIC12.53□□□□□ -0.4
Cpsf4lE9Q2N0 Mtif3-203ENSMUST00000110564 1257 ntAPPRIS P1 TSL 1 (best) BASIC12.53□□□□□ -0.4
Cpsf4lE9Q2N0 Mtif3-204ENSMUST00000110566 1134 ntAPPRIS P1 TSL 1 (best) BASIC12.53□□□□□ -0.4
Cpsf4lE9Q2N0 Cnbp-202ENSMUST00000113617 952 ntTSL 5 BASIC12.53□□□□□ -0.4
Cpsf4lE9Q2N0 Gm4913-201ENSMUST00000117075 1290 ntBASIC12.53□□□□□ -0.4
Cpsf4lE9Q2N0 Gm11594-201ENSMUST00000122313 162 ntBASIC12.53□□□□□ -0.4
Cpsf4lE9Q2N0 Bnipl-204ENSMUST00000137250 1251 ntTSL 5 BASIC12.53□□□□□ -0.4
Cpsf4lE9Q2N0 Psmb1-201ENSMUST00000014913 1036 ntAPPRIS P1 TSL 1 (best) BASIC12.53□□□□□ -0.4
Cpsf4lE9Q2N0 Gm20509-201ENSMUST00000174203 1016 ntAPPRIS P1 TSL 5 BASIC12.53□□□□□ -0.4
Cpsf4lE9Q2N0 1700030N18Rik-201ENSMUST00000202497 966 ntBASIC12.53□□□□□ -0.4
Cpsf4lE9Q2N0 Tspan32-211ENSMUST00000207211 1220 ntTSL 5 BASIC12.53□□□□□ -0.4
Cpsf4lE9Q2N0 Cyp2d40-201ENSMUST00000055721 1161 ntAPPRIS P1 TSL 1 (best) BASIC12.53□□□□□ -0.4
Cpsf4lE9Q2N0 Neurod2-201ENSMUST00000041685 3142 ntAPPRIS P1 TSL 1 (best) BASIC12.53□□□□□ -0.4
Cpsf4lE9Q2N0 Zfp184-202ENSMUST00000102978 3198 ntAPPRIS P1 TSL 5 BASIC12.53□□□□□ -0.4
Cpsf4lE9Q2N0 Sppl2b-201ENSMUST00000035597 2869 ntAPPRIS P1 TSL 1 (best) BASIC12.53□□□□□ -0.4
Cpsf4lE9Q2N0 Acp6-201ENSMUST00000090759 1754 ntAPPRIS P1 TSL 1 (best) BASIC12.53□□□□□ -0.4
Cpsf4lE9Q2N0 P3h1-203ENSMUST00000102662 2977 ntAPPRIS P3 TSL 5 BASIC12.53□□□□□ -0.4
Cpsf4lE9Q2N0 Fstl1-201ENSMUST00000114763 3789 ntAPPRIS P1 TSL 1 (best) BASIC12.53□□□□□ -0.4
Cpsf4lE9Q2N0 Xylt2-201ENSMUST00000116349 3442 ntAPPRIS P1 TSL 1 (best) BASIC12.53□□□□□ -0.4
Cpsf4lE9Q2N0 Cpsf6-206ENSMUST00000176670 2227 ntTSL 5 BASIC12.53□□□□□ -0.4
Cpsf4lE9Q2N0 Sesn3-201ENSMUST00000034507 1827 ntTSL 5 BASIC12.53□□□□□ -0.4
Cpsf4lE9Q2N0 Coro6-201ENSMUST00000021190 1418 ntAPPRIS P5 TSL 1 (best) BASIC12.53□□□□□ -0.4
Cpsf4lE9Q2N0 Lap3-201ENSMUST00000046122 2267 ntAPPRIS P1 TSL 1 (best) BASIC12.53□□□□□ -0.4
Cpsf4lE9Q2N0 Teddm2-202ENSMUST00000123490 1851 ntAPPRIS ALT2 TSL 1 (best) BASIC12.53□□□□□ -0.4
Cpsf4lE9Q2N0 Cyp27a1-201ENSMUST00000027356 1892 ntAPPRIS P1 TSL 1 (best) BASIC12.53□□□□□ -0.4
Cpsf4lE9Q2N0 AC164565.1-201ENSMUST00000217520 1484 ntBASIC12.53□□□□□ -0.4
Cpsf4lE9Q2N0 Bahd1-201ENSMUST00000036578 4594 ntAPPRIS P1 TSL 1 (best) BASIC12.52□□□□□ -0.4
Cpsf4lE9Q2N0 Ggh-201ENSMUST00000098242 1965 ntAPPRIS P1 TSL 1 (best) BASIC12.52□□□□□ -0.4
Retrieved 100 of 76,532 protein–RNA pairs in 25.6 ms