Protein–RNA interactions for Protein: E9PZP8

Herc1, HECT and RLD domain-containing E3 ubiquitin protein ligase family member 1, mousemouse

Predictions only

Length 4,859 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Herc1E9PZP8 Gm13935-201ENSMUST00000121859 798 ntBASIC8.12□□□□□ -1.11
Herc1E9PZP8 Gm11751-201ENSMUST00000126187 460 ntTSL 3 BASIC8.12□□□□□ -1.11
Herc1E9PZP8 Gm45460-201ENSMUST00000211385 1038 ntTSL 5 BASIC8.12□□□□□ -1.11
Herc1E9PZP8 Pacs2-207ENSMUST00000223502 3223 ntAPPRIS ALT2 TSL 1 (best) BASIC8.12□□□□□ -1.11
Herc1E9PZP8 Ache-201ENSMUST00000024099 2186 ntAPPRIS P1 TSL 1 (best) BASIC8.12□□□□□ -1.11
Herc1E9PZP8 Ddx28-201ENSMUST00000058579 2262 ntAPPRIS P1 BASIC8.12□□□□□ -1.11
Herc1E9PZP8 Phf7-201ENSMUST00000022459 2084 ntAPPRIS P1 TSL 1 (best) BASIC8.12□□□□□ -1.11
Herc1E9PZP8 Tatdn2-202ENSMUST00000113022 2416 ntAPPRIS ALT2 TSL 1 (best) BASIC8.12□□□□□ -1.11
Herc1E9PZP8 Nppa-201ENSMUST00000103230 865 ntAPPRIS P1 TSL 1 (best) BASIC8.12□□□□□ -1.11
Herc1E9PZP8 Pla2g2e-203ENSMUST00000105804 786 ntAPPRIS P1 TSL 1 (best) BASIC8.12□□□□□ -1.11
Herc1E9PZP8 Kctd10-201ENSMUST00000001125 1026 ntAPPRIS ALT1 TSL 5 BASIC8.12□□□□□ -1.11
Herc1E9PZP8 Lamr1-ps1-201ENSMUST00000119759 874 ntBASIC8.12□□□□□ -1.11
Herc1E9PZP8 Mpc1-202ENSMUST00000124023 555 ntTSL 2 BASIC8.12□□□□□ -1.11
Herc1E9PZP8 Pcp2-206ENSMUST00000144977 534 ntAPPRIS ALT2 TSL 3 BASIC8.12□□□□□ -1.11
Herc1E9PZP8 Gm15979-201ENSMUST00000149741 590 ntTSL 1 (best) BASIC8.12□□□□□ -1.11
Herc1E9PZP8 Mir6923-201ENSMUST00000184592 72 ntBASIC8.12□□□□□ -1.11
Herc1E9PZP8 Gm43778-201ENSMUST00000199438 199 ntBASIC8.12□□□□□ -1.11
Herc1E9PZP8 Gm10308-201ENSMUST00000095183 742 ntAPPRIS P1 TSL 2 BASIC8.12□□□□□ -1.11
Herc1E9PZP8 Ywhag-205ENSMUST00000198270 1610 ntAPPRIS P1 TSL 5 BASIC8.12□□□□□ -1.11
Herc1E9PZP8 Krt83-201ENSMUST00000023718 1756 ntAPPRIS P1 TSL 1 (best) BASIC8.12□□□□□ -1.11
Herc1E9PZP8 Pcnp-202ENSMUST00000114444 2295 ntAPPRIS P1 TSL 1 (best) BASIC8.12□□□□□ -1.11
Herc1E9PZP8 Npas3-203ENSMUST00000223057 2724 ntAPPRIS ALT2 TSL 5 BASIC8.12□□□□□ -1.11
Herc1E9PZP8 Bean1-204ENSMUST00000171018 3386 ntAPPRIS P4 TSL 1 (best) BASIC8.12□□□□□ -1.11
Herc1E9PZP8 Rasgrp2-224ENSMUST00000167240 2192 ntAPPRIS P1 TSL 5 BASIC8.12□□□□□ -1.11
Herc1E9PZP8 Gpr37l1-201ENSMUST00000027682 2269 ntAPPRIS P1 TSL 1 (best) BASIC8.12□□□□□ -1.11
Herc1E9PZP8 Itm2b-201ENSMUST00000022704 1796 ntAPPRIS P1 TSL 1 (best) BASIC8.12□□□□□ -1.11
Herc1E9PZP8 Nudt1-203ENSMUST00000110825 599 ntTSL 2 BASIC8.12□□□□□ -1.11
Herc1E9PZP8 Adtrp-204ENSMUST00000179758 1046 ntAPPRIS ALT2 TSL 5 BASIC8.12□□□□□ -1.11
Herc1E9PZP8 AC159376.1-201ENSMUST00000218504 630 ntBASIC8.12□□□□□ -1.11
Herc1E9PZP8 Panx2-203ENSMUST00000162424 3391 ntAPPRIS P1 TSL 1 (best) BASIC8.11□□□□□ -1.11
Herc1E9PZP8 Dtnb-222ENSMUST00000174479 3689 ntTSL 1 (best) BASIC8.11□□□□□ -1.11
Herc1E9PZP8 Klhdc8b-210ENSMUST00000193895 2718 ntAPPRIS P1 TSL 5 BASIC8.11□□□□□ -1.11
Herc1E9PZP8 Chsy1-201ENSMUST00000036372 4176 ntAPPRIS P1 TSL 1 (best) BASIC8.11□□□□□ -1.11
Herc1E9PZP8 Krt84-201ENSMUST00000023720 2570 ntAPPRIS P1 TSL 1 (best) BASIC8.11□□□□□ -1.11
Herc1E9PZP8 Apoe-208ENSMUST00000174191 472 ntTSL 2 BASIC8.11□□□□□ -1.11
Herc1E9PZP8 Smim22-207ENSMUST00000184439 382 ntAPPRIS P3 TSL 2 BASIC8.11□□□□□ -1.11
Herc1E9PZP8 Trem3-201ENSMUST00000048065 994 ntAPPRIS P1 TSL 1 (best) BASIC8.11□□□□□ -1.11
Herc1E9PZP8 Dyrk1a-202ENSMUST00000119878 5759 ntAPPRIS P1 TSL 5 BASIC8.11□□□□□ -1.11
Herc1E9PZP8 Rflna-201ENSMUST00000036109 1681 ntAPPRIS P1 TSL 5 BASIC8.11□□□□□ -1.11
Herc1E9PZP8 Med16-201ENSMUST00000105378 3197 ntAPPRIS ALT2 TSL 1 (best) BASIC8.11□□□□□ -1.11
Herc1E9PZP8 Etnk1-204ENSMUST00000205256 2647 ntTSL 1 (best) BASIC8.11□□□□□ -1.11
Herc1E9PZP8 Rgs17-203ENSMUST00000117676 1651 ntAPPRIS P1 TSL 1 (best) BASIC8.11□□□□□ -1.11
Herc1E9PZP8 Gm8365-201ENSMUST00000197334 648 ntBASIC8.11□□□□□ -1.11
Herc1E9PZP8 Ifrd2-201ENSMUST00000010192 2056 ntAPPRIS P1 TSL 1 (best) BASIC8.11□□□□□ -1.11
Herc1E9PZP8 Dsn1-201ENSMUST00000103129 2080 ntAPPRIS P1 TSL 1 (best) BASIC8.11□□□□□ -1.11
Herc1E9PZP8 4930429H19Rik-201ENSMUST00000205260 1818 ntTSL 1 (best) BASIC8.11□□□□□ -1.11
Herc1E9PZP8 Nup98-205ENSMUST00000211022 3132 ntTSL 2 BASIC8.11□□□□□ -1.11
Herc1E9PZP8 Spx-202ENSMUST00000126521 357 ntAPPRIS P2 TSL 5 BASIC8.11□□□□□ -1.11
Herc1E9PZP8 Rbm11-202ENSMUST00000114249 2750 ntAPPRIS ALT2 TSL 5 BASIC8.11□□□□□ -1.11
Herc1E9PZP8 Dctd-201ENSMUST00000033966 2072 ntAPPRIS P1 TSL 1 (best) BASIC8.11□□□□□ -1.11
Herc1E9PZP8 Crtac1-201ENSMUST00000048630 2616 ntAPPRIS P1 TSL 1 (best) BASIC8.11□□□□□ -1.11
Herc1E9PZP8 Klhdc10-201ENSMUST00000068240 3951 ntTSL 1 (best) BASIC8.11□□□□□ -1.11
Herc1E9PZP8 Rcn1-201ENSMUST00000006128 2720 ntAPPRIS P1 TSL 1 (best) BASIC8.11□□□□□ -1.11
Herc1E9PZP8 Irf7-201ENSMUST00000026571 1916 ntAPPRIS P3 TSL 1 (best) BASIC8.11□□□□□ -1.11
Herc1E9PZP8 Pip5k1c-202ENSMUST00000105327 2551 ntAPPRIS P3 TSL 1 (best) BASIC8.11□□□□□ -1.11
Herc1E9PZP8 Hirip3-201ENSMUST00000037248 2766 ntAPPRIS P1 TSL 1 (best) BASIC8.11□□□□□ -1.11
Herc1E9PZP8 Ssx2ip-204ENSMUST00000106153 3446 ntAPPRIS P3 TSL 1 (best) BASIC8.11□□□□□ -1.11
Herc1E9PZP8 G3bp2-209ENSMUST00000202258 1884 ntAPPRIS P3 TSL 1 (best) BASIC8.11□□□□□ -1.11
Herc1E9PZP8 Polr3h-201ENSMUST00000023113 2514 ntAPPRIS P1 TSL 1 (best) BASIC8.11□□□□□ -1.11
Herc1E9PZP8 Tcf3-206ENSMUST00000105342 2928 ntAPPRIS ALT2 TSL 1 (best) BASIC8.11□□□□□ -1.11
Herc1E9PZP8 Cap1-203ENSMUST00000106257 2768 ntAPPRIS P1 TSL 1 (best) BASIC8.11□□□□□ -1.11
Herc1E9PZP8 Deaf1-209ENSMUST00000211537 2882 ntTSL 2 BASIC8.11□□□□□ -1.11
Herc1E9PZP8 Gm11964-201ENSMUST00000120982 444 ntBASIC8.11□□□□□ -1.11
Herc1E9PZP8 Tepp-204ENSMUST00000161029 968 ntAPPRIS P4 TSL 1 (best) BASIC8.11□□□□□ -1.11
Herc1E9PZP8 Tlx1-202ENSMUST00000174617 806 ntTSL 5 BASIC8.11□□□□□ -1.11
Herc1E9PZP8 Anapc16-205ENSMUST00000182912 566 ntTSL 2 BASIC8.11□□□□□ -1.11
Herc1E9PZP8 Gm33320-201ENSMUST00000192232 530 ntBASIC8.11□□□□□ -1.11
Herc1E9PZP8 Defb36-201ENSMUST00000058086 468 ntAPPRIS P1 TSL 1 (best) BASIC8.11□□□□□ -1.11
Herc1E9PZP8 n-R5s195-201ENSMUST00000082891 119 ntBASIC8.11□□□□□ -1.11
Herc1E9PZP8 Trip10-201ENSMUST00000019631 2224 ntAPPRIS ALT2 TSL 1 (best) BASIC8.1□□□□□ -1.11
Herc1E9PZP8 Slc16a10-202ENSMUST00000213488 2325 ntTSL 1 (best) BASIC8.1□□□□□ -1.11
Herc1E9PZP8 AC123857.2-201ENSMUST00000225756 1582 ntBASIC8.1□□□□□ -1.11
Herc1E9PZP8 Amigo1-201ENSMUST00000050909 5030 ntAPPRIS P1 TSL 1 (best) BASIC8.1□□□□□ -1.11
Herc1E9PZP8 Ints8-203ENSMUST00000108319 3220 ntAPPRIS P1 TSL 1 (best) BASIC8.1□□□□□ -1.11
Herc1E9PZP8 Armc9-205ENSMUST00000131412 2160 ntAPPRIS P1 TSL 1 (best) BASIC8.1□□□□□ -1.11
Herc1E9PZP8 Stpg3-201ENSMUST00000043774 1430 ntAPPRIS P2 TSL 1 (best) BASIC8.1□□□□□ -1.11
Herc1E9PZP8 Gm38037-201ENSMUST00000192600 1624 ntBASIC8.1□□□□□ -1.11
Herc1E9PZP8 Abhd6-202ENSMUST00000166497 2226 ntAPPRIS P1 TSL 1 (best) BASIC8.1□□□□□ -1.11
Herc1E9PZP8 Nop56-202ENSMUST00000103198 1877 ntAPPRIS P1 TSL 1 (best) BASIC8.1□□□□□ -1.11
Herc1E9PZP8 Gm14726-201ENSMUST00000120623 896 ntBASIC8.1□□□□□ -1.11
Herc1E9PZP8 4930502E09Rik-201ENSMUST00000126016 755 ntTSL 1 (best) BASIC8.1□□□□□ -1.11
Herc1E9PZP8 Zfp637-210ENSMUST00000164472 1098 ntAPPRIS P1 TSL 1 (best) BASIC8.1□□□□□ -1.11
Herc1E9PZP8 6030498E09Rik-202ENSMUST00000168144 510 ntAPPRIS P1 TSL 5 BASIC8.1□□□□□ -1.11
Herc1E9PZP8 Gm6983-201ENSMUST00000214912 628 ntBASIC8.1□□□□□ -1.11
Herc1E9PZP8 Gpaa1-201ENSMUST00000023221 2107 ntAPPRIS P1 TSL 1 (best) BASIC8.1□□□□□ -1.11
Herc1E9PZP8 Necap2-201ENSMUST00000030760 1906 ntAPPRIS P1 TSL 1 (best) BASIC8.1□□□□□ -1.11
Herc1E9PZP8 Gm7324-201ENSMUST00000094051 1647 ntAPPRIS P1 BASIC8.1□□□□□ -1.11
Herc1E9PZP8 Wnt10a-201ENSMUST00000006718 2468 ntAPPRIS P1 TSL 1 (best) BASIC8.1□□□□□ -1.11
Herc1E9PZP8 Eif3b-201ENSMUST00000100507 2945 ntAPPRIS P1 TSL 1 (best) BASIC8.1□□□□□ -1.11
Herc1E9PZP8 Gm25604-201ENSMUST00000158359 133 ntBASIC8.1□□□□□ -1.11
Herc1E9PZP8 Gm6222-202ENSMUST00000182143 629 ntBASIC8.1□□□□□ -1.11
Herc1E9PZP8 Gm3671-201ENSMUST00000182463 1007 ntBASIC8.1□□□□□ -1.11
Herc1E9PZP8 Mrto4-ps1-201ENSMUST00000220565 721 ntBASIC8.1□□□□□ -1.11
Herc1E9PZP8 Gm13199-201ENSMUST00000071016 747 ntAPPRIS P1 TSL 1 (best) BASIC8.1□□□□□ -1.11
Herc1E9PZP8 Pigl-201ENSMUST00000014389 2174 ntAPPRIS P1 TSL 1 (best) BASIC8.1□□□□□ -1.11
Herc1E9PZP8 Tmem55a-201ENSMUST00000029875 2339 ntAPPRIS P1 TSL 1 (best) BASIC8.1□□□□□ -1.11
Herc1E9PZP8 A230060F14Rik-202ENSMUST00000190739 1889 ntBASIC8.1□□□□□ -1.11
Herc1E9PZP8 Pex11a-201ENSMUST00000032761 2241 ntAPPRIS P1 TSL 1 (best) BASIC8.1□□□□□ -1.11
Herc1E9PZP8 Rec8-201ENSMUST00000002395 2184 ntAPPRIS P1 TSL 1 (best) BASIC8.1□□□□□ -1.11
Herc1E9PZP8 Prmt6-203ENSMUST00000190378 3051 ntAPPRIS P1 TSL 1 (best) BASIC8.1□□□□□ -1.11
Retrieved 100 of 76,532 protein–RNA pairs in 22.9 ms