Protein–RNA interactions for Protein: E0CXC2

Gm28043, E3 ubiquitin-protein ligase RNF8, mousemouse

Predictions only

Length 719 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Gm28043E0CXC2 1700020A23Rik-202ENSMUST00000110281 521 ntAPPRIS P1 TSL 3 BASIC14.9□□□□□ -0.02
Gm28043E0CXC2 Pgam1-ps1-201ENSMUST00000119107 749 ntBASIC14.9□□□□□ -0.02
Gm28043E0CXC2 Ffar2-203ENSMUST00000168528 1210 ntAPPRIS P1 TSL 1 (best) BASIC14.9□□□□□ -0.02
Gm28043E0CXC2 Gm21887-202ENSMUST00000179760 483 ntAPPRIS ALT2 TSL 5 BASIC14.9□□□□□ -0.02
Gm28043E0CXC2 Rps13-ps1-201ENSMUST00000183478 538 ntBASIC14.9□□□□□ -0.02
Gm28043E0CXC2 D530014G21Rik-201ENSMUST00000208416 587 ntTSL 1 (best) BASIC14.9□□□□□ -0.02
Gm28043E0CXC2 Gm38575-201ENSMUST00000213881 652 ntTSL 2 BASIC14.9□□□□□ -0.02
Gm28043E0CXC2 5830454E08Rik-202ENSMUST00000213974 744 ntBASIC14.9□□□□□ -0.02
Gm28043E0CXC2 Gm33054-201ENSMUST00000216588 313 ntTSL 5 BASIC14.9□□□□□ -0.02
Gm28043E0CXC2 Chmp2a-201ENSMUST00000005711 949 ntAPPRIS P1 TSL 1 (best) BASIC14.9□□□□□ -0.02
Gm28043E0CXC2 Mrgpra9-201ENSMUST00000098436 1049 ntAPPRIS ALT2 TSL 5 BASIC14.9□□□□□ -0.02
Gm28043E0CXC2 Sh2b3-202ENSMUST00000086310 4195 ntAPPRIS P3 TSL 1 (best) BASIC14.9□□□□□ -0.02
Gm28043E0CXC2 Cul5-209ENSMUST00000166367 5942 ntTSL 5 BASIC14.9□□□□□ -0.02
Gm28043E0CXC2 Tmem39a-214ENSMUST00000171687 2667 ntTSL 1 (best) BASIC14.9□□□□□ -0.02
Gm28043E0CXC2 Aptx-201ENSMUST00000030119 5250 ntAPPRIS ALT2 TSL 1 (best) BASIC14.9□□□□□ -0.02
Gm28043E0CXC2 Fam169b-202ENSMUST00000125685 2821 ntAPPRIS P2 TSL 1 (best) BASIC14.9□□□□□ -0.02
Gm28043E0CXC2 Zfr2-201ENSMUST00000117798 3349 ntAPPRIS P1 TSL 5 BASIC14.9□□□□□ -0.02
Gm28043E0CXC2 Cpeb3-208ENSMUST00000132580 3148 ntAPPRIS P3 TSL 1 (best) BASIC14.9□□□□□ -0.02
Gm28043E0CXC2 Dnase1l2-201ENSMUST00000088506 1921 ntAPPRIS P1 TSL 1 (best) BASIC14.9□□□□□ -0.02
Gm28043E0CXC2 Rbbp9-201ENSMUST00000028915 2170 ntAPPRIS P1 TSL 1 (best) BASIC14.9□□□□□ -0.02
Gm28043E0CXC2 Ctnnb1-201ENSMUST00000007130 3623 ntAPPRIS P1 TSL 1 (best) BASIC14.9□□□□□ -0.02
Gm28043E0CXC2 Ren1-201ENSMUST00000094556 1592 ntAPPRIS P1 TSL 1 (best) BASIC14.9□□□□□ -0.02
Gm28043E0CXC2 Mindy1-212ENSMUST00000168223 1812 ntTSL 5 BASIC14.89□□□□□ -0.03
Gm28043E0CXC2 Drd5-201ENSMUST00000041646 3152 ntAPPRIS P1 BASIC14.89□□□□□ -0.03
Gm28043E0CXC2 Dab1-203ENSMUST00000106830 5278 ntAPPRIS P1 TSL 1 (best) BASIC14.89□□□□□ -0.03
Gm28043E0CXC2 Fut11-201ENSMUST00000048016 4163 ntAPPRIS P1 TSL 1 (best) BASIC14.89□□□□□ -0.03
Gm28043E0CXC2 Lix1l-201ENSMUST00000062058 3312 ntAPPRIS P1 TSL 1 (best) BASIC14.89□□□□□ -0.03
Gm28043E0CXC2 Camk2b-205ENSMUST00000093355 1973 ntTSL 5 BASIC14.89□□□□□ -0.03
Gm28043E0CXC2 Kcng1-202ENSMUST00000109191 4089 ntAPPRIS P1 TSL 5 BASIC14.89□□□□□ -0.03
Gm28043E0CXC2 Gm43399-201ENSMUST00000202546 2374 ntBASIC14.89□□□□□ -0.03
Gm28043E0CXC2 Cadps2-209ENSMUST00000142913 4533 ntAPPRIS ALT2 TSL 5 BASIC14.89□□□□□ -0.03
Gm28043E0CXC2 Kdm2b-201ENSMUST00000031435 3532 ntTSL 1 (best) BASIC14.89□□□□□ -0.03
Gm28043E0CXC2 Chodl-201ENSMUST00000023568 2535 ntAPPRIS P1 TSL 1 (best) BASIC14.89□□□□□ -0.03
Gm28043E0CXC2 Kdf1-203ENSMUST00000121797 2256 ntAPPRIS ALT2 TSL 2 BASIC14.89□□□□□ -0.03
Gm28043E0CXC2 Rragb-201ENSMUST00000039720 2258 ntAPPRIS P1 TSL 1 (best) BASIC14.89□□□□□ -0.03
Gm28043E0CXC2 Kif3a-201ENSMUST00000057330 2290 ntTSL 1 (best) BASIC14.89□□□□□ -0.03
Gm28043E0CXC2 Cyp2a5-201ENSMUST00000005685 2013 ntAPPRIS P1 TSL 1 (best) BASIC14.89□□□□□ -0.03
Gm28043E0CXC2 Psmd14-201ENSMUST00000028278 1541 ntAPPRIS P1 TSL 1 (best) BASIC14.89□□□□□ -0.03
Gm28043E0CXC2 Thumpd1-201ENSMUST00000033236 2689 ntAPPRIS P1 TSL 1 (best) BASIC14.89□□□□□ -0.03
Gm28043E0CXC2 Gm25990-201ENSMUST00000102440 86 ntBASIC14.89□□□□□ -0.03
Gm28043E0CXC2 Yif1b-203ENSMUST00000108238 1126 ntAPPRIS ALT2 TSL 1 (best) BASIC14.89□□□□□ -0.03
Gm28043E0CXC2 Gm13418-201ENSMUST00000119097 944 ntBASIC14.89□□□□□ -0.03
Gm28043E0CXC2 Gm15358-201ENSMUST00000119249 520 ntBASIC14.89□□□□□ -0.03
Gm28043E0CXC2 Rbmx-206ENSMUST00000143310 1296 ntTSL 5 BASIC14.89□□□□□ -0.03
Gm28043E0CXC2 Slc19a2-204ENSMUST00000169394 894 ntTSL 5 BASIC14.89□□□□□ -0.03
Gm28043E0CXC2 Gm44202-201ENSMUST00000203549 532 ntTSL 3 BASIC14.89□□□□□ -0.03
Gm28043E0CXC2 AC093926.2-201ENSMUST00000214468 1228 ntBASIC14.89□□□□□ -0.03
Gm28043E0CXC2 AC158538.2-201ENSMUST00000225455 906 ntBASIC14.89□□□□□ -0.03
Gm28043E0CXC2 AC154757.1-201ENSMUST00000228289 336 ntBASIC14.89□□□□□ -0.03
Gm28043E0CXC2 A330070K13Rik-201ENSMUST00000063656 633 ntAPPRIS P1 TSL 1 (best) BASIC14.89□□□□□ -0.03
Gm28043E0CXC2 Aurkaip1-201ENSMUST00000084097 1159 ntAPPRIS P1 TSL 1 (best) BASIC14.89□□□□□ -0.03
Gm28043E0CXC2 Acaa1b-201ENSMUST00000010795 1689 ntAPPRIS P1 TSL 1 (best) BASIC14.89□□□□□ -0.03
Gm28043E0CXC2 2700080J24Rik-201ENSMUST00000205314 1662 ntBASIC14.89□□□□□ -0.03
Gm28043E0CXC2 Ints10-203ENSMUST00000110241 2322 ntTSL 1 (best) BASIC14.89□□□□□ -0.03
Gm28043E0CXC2 Il1r1-202ENSMUST00000114795 4832 ntAPPRIS ALT2 TSL 1 (best) BASIC14.89□□□□□ -0.03
Gm28043E0CXC2 Rxrg-203ENSMUST00000111384 1967 ntAPPRIS P1 TSL 5 BASIC14.89□□□□□ -0.03
Gm28043E0CXC2 Trim27-201ENSMUST00000021761 4204 ntAPPRIS P1 TSL 1 (best) BASIC14.89□□□□□ -0.03
Gm28043E0CXC2 Syt12-201ENSMUST00000059295 3581 ntAPPRIS P1 TSL 1 (best) BASIC14.89□□□□□ -0.03
Gm28043E0CXC2 Lcat-201ENSMUST00000038896 1342 ntAPPRIS P1 TSL 1 (best) BASIC14.89□□□□□ -0.03
Gm28043E0CXC2 Rnf34-201ENSMUST00000031434 4440 ntAPPRIS P1 TSL 1 (best) BASIC14.89□□□□□ -0.03
Gm28043E0CXC2 Fam103a1-201ENSMUST00000042166 1452 ntAPPRIS P1 TSL 1 (best) BASIC14.89□□□□□ -0.03
Gm28043E0CXC2 Robo4-205ENSMUST00000214185 4952 ntAPPRIS ALT2 TSL 1 (best) BASIC14.88□□□□□ -0.03
Gm28043E0CXC2 Adam22-207ENSMUST00000115388 9161 ntAPPRIS ALT2 TSL 5 BASIC14.88□□□□□ -0.03
Gm28043E0CXC2 Gnpat-201ENSMUST00000034466 2984 ntAPPRIS P1 TSL 1 (best) BASIC14.88□□□□□ -0.03
Gm28043E0CXC2 Ppig-201ENSMUST00000040915 6245 ntAPPRIS P1 TSL 1 (best) BASIC14.88□□□□□ -0.03
Gm28043E0CXC2 Slc33a1-203ENSMUST00000161659 2554 ntAPPRIS P1 TSL 1 (best) BASIC14.88□□□□□ -0.03
Gm28043E0CXC2 Pde4dip-205ENSMUST00000168438 8264 ntAPPRIS ALT2 TSL 1 (best) BASIC14.88□□□□□ -0.03
Gm28043E0CXC2 Ppfia3-201ENSMUST00000003961 4647 ntAPPRIS P1 TSL 1 (best) BASIC14.88□□□□□ -0.03
Gm28043E0CXC2 Cage1-202ENSMUST00000089840 3449 ntTSL 1 (best) BASIC14.88□□□□□ -0.03
Gm28043E0CXC2 Klf15-202ENSMUST00000113530 2374 ntAPPRIS P1 TSL 5 BASIC14.88□□□□□ -0.03
Gm28043E0CXC2 Serpinf1-201ENSMUST00000000769 1832 ntAPPRIS P1 TSL 1 (best) BASIC14.88□□□□□ -0.03
Gm28043E0CXC2 Gm12620-201ENSMUST00000119791 1986 ntBASIC14.88□□□□□ -0.03
Gm28043E0CXC2 Gm12612-201ENSMUST00000140182 1986 ntBASIC14.88□□□□□ -0.03
Gm28043E0CXC2 Tsacc-202ENSMUST00000107556 584 ntAPPRIS P1 TSL 1 (best) BASIC14.88□□□□□ -0.03
Gm28043E0CXC2 Gm14722-201ENSMUST00000118943 689 ntBASIC14.88□□□□□ -0.03
Gm28043E0CXC2 Chchd7-203ENSMUST00000119307 889 ntAPPRIS P1 TSL 2 BASIC14.88□□□□□ -0.03
Gm28043E0CXC2 Otud4-203ENSMUST00000173286 7213 ntAPPRIS ALT2 TSL 1 (best) BASIC14.88□□□□□ -0.03
Gm28043E0CXC2 Gm4189-202ENSMUST00000174167 367 ntTSL 3 BASIC14.88□□□□□ -0.03
Gm28043E0CXC2 Mir8098-201ENSMUST00000184011 137 ntBASIC14.88□□□□□ -0.03
Gm28043E0CXC2 Abhd18-206ENSMUST00000203650 797 ntTSL 5 BASIC14.88□□□□□ -0.03
Gm28043E0CXC2 Gm6376-201ENSMUST00000209407 580 ntBASIC14.88□□□□□ -0.03
Gm28043E0CXC2 Ndufb9-201ENSMUST00000022980 704 ntAPPRIS P1 TSL 1 (best) BASIC14.88□□□□□ -0.03
Gm28043E0CXC2 Gm15512-201ENSMUST00000137359 2257 ntTSL 1 (best) BASIC14.88□□□□□ -0.03
Gm28043E0CXC2 Asb18-201ENSMUST00000086882 3862 ntAPPRIS P1 TSL 1 (best) BASIC14.88□□□□□ -0.03
Gm28043E0CXC2 Mocos-201ENSMUST00000068006 2884 ntAPPRIS P1 TSL 1 (best) BASIC14.88□□□□□ -0.03
Gm28043E0CXC2 Tpgs2-201ENSMUST00000115817 4159 ntAPPRIS P3 TSL 1 (best) BASIC14.88□□□□□ -0.03
Gm28043E0CXC2 Mbp-202ENSMUST00000062446 2186 ntAPPRIS P4 TSL 1 (best) BASIC14.88□□□□□ -0.03
Gm28043E0CXC2 Ext1-201ENSMUST00000077273 7663 ntAPPRIS P1 TSL 1 (best) BASIC14.88□□□□□ -0.03
Gm28043E0CXC2 Cpne1-203ENSMUST00000109608 3492 ntAPPRIS P1 TSL 1 (best) BASIC14.87□□□□□ -0.03
Gm28043E0CXC2 Rnf144a-201ENSMUST00000020971 5164 ntAPPRIS P1 TSL 1 (best) BASIC14.87□□□□□ -0.03
Gm28043E0CXC2 Gm18856-201ENSMUST00000178096 1374 ntBASIC14.87□□□□□ -0.03
Gm28043E0CXC2 Ttc7-201ENSMUST00000041110 4614 ntAPPRIS P1 TSL 1 (best) BASIC14.87□□□□□ -0.03
Gm28043E0CXC2 Chtop-205ENSMUST00000107343 3118 ntTSL 1 (best) BASIC14.87□□□□□ -0.03
Gm28043E0CXC2 Pcdh7-202ENSMUST00000094783 3752 ntAPPRIS ALT1 TSL 1 (best) BASIC14.87□□□□□ -0.03
Gm28043E0CXC2 AC167013.2-201ENSMUST00000228520 2684 ntBASIC14.87□□□□□ -0.03
Gm28043E0CXC2 Cspp1-205ENSMUST00000122156 2535 ntTSL 1 (best) BASIC14.87□□□□□ -0.03
Gm28043E0CXC2 Rnf31-201ENSMUST00000019443 3485 ntAPPRIS P1 TSL 1 (best) BASIC14.87□□□□□ -0.03
Gm28043E0CXC2 Gm37297-201ENSMUST00000192974 2384 ntBASIC14.87□□□□□ -0.03
Gm28043E0CXC2 Ndufb6-202ENSMUST00000108108 480 ntTSL 3 BASIC14.87□□□□□ -0.03
Gm28043E0CXC2 Btn1a1-202ENSMUST00000110434 1077 ntTSL 1 (best) BASIC14.87□□□□□ -0.03
Retrieved 100 of 76,532 protein–RNA pairs in 33.5 ms