Protein–RNA interactions for Protein: D3YZU1

Shank1, SH3 and multiple ankyrin repeat domains protein 1, mousemouse

Predictions only

Length 2,167 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Shank1D3YZU1 Map3k12-207ENSMUST00000169377 4210 ntAPPRIS P1 TSL 1 (best) BASIC13.27□□□□□ -0.28
Shank1D3YZU1 Fam103a1-201ENSMUST00000042166 1452 ntAPPRIS P1 TSL 1 (best) BASIC13.27□□□□□ -0.28
Shank1D3YZU1 Spdya-201ENSMUST00000064420 1877 ntTSL 1 (best) BASIC13.27□□□□□ -0.29
Shank1D3YZU1 Trim3-205ENSMUST00000147044 2972 ntAPPRIS P1 TSL 1 (best) BASIC13.27□□□□□ -0.29
Shank1D3YZU1 Eml2-203ENSMUST00000120595 2255 ntAPPRIS ALT2 TSL 1 (best) BASIC13.27□□□□□ -0.29
Shank1D3YZU1 AC131743.5-201ENSMUST00000220775 1618 ntBASIC13.27□□□□□ -0.29
Shank1D3YZU1 Glis1-201ENSMUST00000046005 2906 ntAPPRIS P2 TSL 1 (best) BASIC13.27□□□□□ -0.29
Shank1D3YZU1 Bcor-202ENSMUST00000065143 6839 ntAPPRIS P4 TSL 1 (best) BASIC13.27□□□□□ -0.29
Shank1D3YZU1 Lenep-201ENSMUST00000057431 1806 ntAPPRIS P1 BASIC13.27□□□□□ -0.29
Shank1D3YZU1 Smarcc1-204ENSMUST00000197984 3538 ntAPPRIS ALT2 TSL 1 (best) BASIC13.27□□□□□ -0.29
Shank1D3YZU1 Pspc1-202ENSMUST00000163924 2863 ntAPPRIS ALT2 TSL 1 (best) BASIC13.27□□□□□ -0.29
Shank1D3YZU1 Col4a3bp-203ENSMUST00000179226 3040 ntTSL 1 (best) BASIC13.27□□□□□ -0.29
Shank1D3YZU1 Canx-205ENSMUST00000179865 4281 ntAPPRIS P1 TSL 1 (best) BASIC13.27□□□□□ -0.29
Shank1D3YZU1 Tjap1-214ENSMUST00000225413 2189 ntAPPRIS ALT2 BASIC13.27□□□□□ -0.29
Shank1D3YZU1 Adam33-201ENSMUST00000052104 2795 ntAPPRIS ALT2 TSL 1 (best) BASIC13.27□□□□□ -0.29
Shank1D3YZU1 Sergef-201ENSMUST00000033127 1465 ntAPPRIS P1 TSL 1 (best) BASIC13.27□□□□□ -0.29
Shank1D3YZU1 H13-203ENSMUST00000109825 1063 ntTSL 1 (best) BASIC13.27□□□□□ -0.29
Shank1D3YZU1 Gm13066-201ENSMUST00000145263 884 ntTSL 1 (best) BASIC13.27□□□□□ -0.29
Shank1D3YZU1 Cd63-ps-201ENSMUST00000145417 875 ntBASIC13.27□□□□□ -0.29
Shank1D3YZU1 AC090659.2-201ENSMUST00000225378 1186 ntBASIC13.27□□□□□ -0.29
Shank1D3YZU1 Nudt17-201ENSMUST00000029742 1039 ntTSL 1 (best) BASIC13.27□□□□□ -0.29
Shank1D3YZU1 Uqcr10-201ENSMUST00000058407 434 ntAPPRIS P1 TSL 1 (best) BASIC13.27□□□□□ -0.29
Shank1D3YZU1 Farp2-202ENSMUST00000122402 2816 ntTSL 1 (best) BASIC13.27□□□□□ -0.29
Shank1D3YZU1 Gk5-201ENSMUST00000085217 2815 ntAPPRIS ALT2 TSL 1 (best) BASIC13.27□□□□□ -0.29
Shank1D3YZU1 Carmil2-201ENSMUST00000062574 2526 ntTSL 1 (best) BASIC13.26□□□□□ -0.29
Shank1D3YZU1 Sphk1-202ENSMUST00000063446 2527 ntAPPRIS ALT2 TSL 2 BASIC13.26□□□□□ -0.29
Shank1D3YZU1 Fastk-203ENSMUST00000115043 3056 ntTSL 1 (best) BASIC13.26□□□□□ -0.29
Shank1D3YZU1 Ecel1-203ENSMUST00000160810 2898 ntAPPRIS P1 TSL 1 (best) BASIC13.26□□□□□ -0.29
Shank1D3YZU1 Bcor-203ENSMUST00000115512 6887 ntAPPRIS ALT2 TSL 1 (best) BASIC13.26□□□□□ -0.29
Shank1D3YZU1 Lifr-201ENSMUST00000067190 4143 ntAPPRIS P3 TSL 1 (best) BASIC13.26□□□□□ -0.29
Shank1D3YZU1 B3galt6-201ENSMUST00000052185 3184 ntAPPRIS P1 BASIC13.26□□□□□ -0.29
Shank1D3YZU1 Sez6-202ENSMUST00000093995 4239 ntAPPRIS P3 TSL 1 (best) BASIC13.26□□□□□ -0.29
Shank1D3YZU1 Spsb1-203ENSMUST00000105685 1537 ntAPPRIS P1 TSL 1 (best) BASIC13.26□□□□□ -0.29
Shank1D3YZU1 Poglut1-201ENSMUST00000036210 2758 ntAPPRIS P1 TSL 1 (best) BASIC13.26□□□□□ -0.29
Shank1D3YZU1 Cyp4f14-202ENSMUST00000179434 2207 ntAPPRIS P1 TSL 5 BASIC13.26□□□□□ -0.29
Shank1D3YZU1 Cyp4f14-201ENSMUST00000054174 2207 ntAPPRIS P1 TSL 1 (best) BASIC13.26□□□□□ -0.29
Shank1D3YZU1 Prkcb-201ENSMUST00000064921 2557 ntAPPRIS ALT2 TSL 1 (best) BASIC13.26□□□□□ -0.29
Shank1D3YZU1 Ripk1-201ENSMUST00000021844 3266 ntAPPRIS P1 TSL 1 (best) BASIC13.26□□□□□ -0.29
Shank1D3YZU1 Ldb3-207ENSMUST00000227819 1499 ntBASIC13.26□□□□□ -0.29
Shank1D3YZU1 Gda-201ENSMUST00000087600 5428 ntAPPRIS P1 TSL 1 (best) BASIC13.26□□□□□ -0.29
Shank1D3YZU1 Vill-207ENSMUST00000141185 1645 ntTSL 1 (best) BASIC13.26□□□□□ -0.29
Shank1D3YZU1 Mansc4-202ENSMUST00000123367 542 ntAPPRIS ALT2 TSL 2 BASIC13.26□□□□□ -0.29
Shank1D3YZU1 Gm15420-201ENSMUST00000133274 382 ntTSL 3 BASIC13.26□□□□□ -0.29
Shank1D3YZU1 Gm45552-201ENSMUST00000209340 778 ntTSL 3 BASIC13.26□□□□□ -0.29
Shank1D3YZU1 Gm45668-201ENSMUST00000211271 493 ntBASIC13.26□□□□□ -0.29
Shank1D3YZU1 Hdhd3-201ENSMUST00000037820 1205 ntAPPRIS P1 TSL 1 (best) BASIC13.26□□□□□ -0.29
Shank1D3YZU1 Krtap19-3-201ENSMUST00000075284 526 ntAPPRIS P1 BASIC13.26□□□□□ -0.29
Shank1D3YZU1 Ptprm-202ENSMUST00000223982 4802 ntAPPRIS P2 BASIC13.26□□□□□ -0.29
Shank1D3YZU1 Anapc5-201ENSMUST00000086216 2760 ntAPPRIS P3 TSL 1 (best) BASIC13.26□□□□□ -0.29
Shank1D3YZU1 Ccnyl1-202ENSMUST00000114077 3281 ntTSL 1 (best) BASIC13.26□□□□□ -0.29
Shank1D3YZU1 Ifrd2-201ENSMUST00000010192 2056 ntAPPRIS P1 TSL 1 (best) BASIC13.26□□□□□ -0.29
Shank1D3YZU1 Cyp2t4-201ENSMUST00000108385 1599 ntAPPRIS ALT2 TSL 5 BASIC13.26□□□□□ -0.29
Shank1D3YZU1 Rabggta-205ENSMUST00000227061 2882 ntAPPRIS P1 BASIC13.26□□□□□ -0.29
Shank1D3YZU1 Ccr9-202ENSMUST00000163559 3004 ntAPPRIS P1 TSL 1 (best) BASIC13.26□□□□□ -0.29
Shank1D3YZU1 Efhd1-201ENSMUST00000027472 1854 ntAPPRIS P1 TSL 1 (best) BASIC13.26□□□□□ -0.29
Shank1D3YZU1 Egfl7-202ENSMUST00000102907 1372 ntAPPRIS P4 TSL 1 (best) BASIC13.26□□□□□ -0.29
Shank1D3YZU1 Sema6d-201ENSMUST00000051419 4503 ntAPPRIS ALT2 TSL 1 (best) BASIC13.26□□□□□ -0.29
Shank1D3YZU1 Ncs1-201ENSMUST00000000199 4653 ntAPPRIS P1 TSL 1 (best) BASIC13.26□□□□□ -0.29
Shank1D3YZU1 Chchd5-201ENSMUST00000035481 1325 ntAPPRIS P1 TSL 1 (best) BASIC13.26□□□□□ -0.29
Shank1D3YZU1 AC164565.1-201ENSMUST00000217520 1484 ntBASIC13.26□□□□□ -0.29
Shank1D3YZU1 Elmo2-203ENSMUST00000094329 3466 ntAPPRIS P2 TSL 1 (best) BASIC13.26□□□□□ -0.29
Shank1D3YZU1 Gm44729-201ENSMUST00000206759 2052 ntBASIC13.26□□□□□ -0.29
Shank1D3YZU1 Foxi1-201ENSMUST00000060271 2357 ntAPPRIS P1 TSL 1 (best) BASIC13.26□□□□□ -0.29
Shank1D3YZU1 Znfx1-201ENSMUST00000048988 7218 ntAPPRIS P1 TSL 1 (best) BASIC13.25□□□□□ -0.29
Shank1D3YZU1 Nxf1-202ENSMUST00000010248 748 ntTSL 1 (best) BASIC13.25□□□□□ -0.29
Shank1D3YZU1 Tcf3-207ENSMUST00000105343 2920 ntAPPRIS ALT2 TSL 1 (best) BASIC13.25□□□□□ -0.29
Shank1D3YZU1 Park7-205ENSMUST00000105676 582 ntTSL 5 BASIC13.25□□□□□ -0.29
Shank1D3YZU1 Gm4204-201ENSMUST00000110798 1231 ntBASIC13.25□□□□□ -0.29
Shank1D3YZU1 Pisd-ps1-201ENSMUST00000119128 1115 ntBASIC13.25□□□□□ -0.29
Shank1D3YZU1 Gm37117-201ENSMUST00000194238 589 ntTSL 5 BASIC13.25□□□□□ -0.29
Shank1D3YZU1 Vps25-202ENSMUST00000042477 1106 ntAPPRIS P1 TSL 1 (best) BASIC13.25□□□□□ -0.29
Shank1D3YZU1 Lefty2-201ENSMUST00000085797 2473 ntAPPRIS P1 TSL 1 (best) BASIC13.25□□□□□ -0.29
Shank1D3YZU1 Fbxo22-201ENSMUST00000034859 2112 ntAPPRIS P1 TSL 1 (best) BASIC13.25□□□□□ -0.29
Shank1D3YZU1 Irgc1-204ENSMUST00000205776 1835 ntAPPRIS P1 TSL 1 (best) BASIC13.25□□□□□ -0.29
Shank1D3YZU1 Maged1-201ENSMUST00000026142 2821 ntAPPRIS P1 TSL 1 (best) BASIC13.25□□□□□ -0.29
Shank1D3YZU1 Nfat5-211ENSMUST00000151114 4982 ntAPPRIS P3 TSL 1 (best) BASIC13.25□□□□□ -0.29
Shank1D3YZU1 Wnt1-201ENSMUST00000023734 2378 ntAPPRIS P1 TSL 1 (best) BASIC13.25□□□□□ -0.29
Shank1D3YZU1 Ttll5-203ENSMUST00000095536 4150 ntAPPRIS ALT2 TSL 2 BASIC13.25□□□□□ -0.29
Shank1D3YZU1 Ppp1r8-201ENSMUST00000030702 2037 ntAPPRIS P3 TSL 1 (best) BASIC13.25□□□□□ -0.29
Shank1D3YZU1 Fzd5-201ENSMUST00000063982 6915 ntAPPRIS P1 TSL 1 (best) BASIC13.25□□□□□ -0.29
Shank1D3YZU1 Hoxc9-201ENSMUST00000001706 2374 ntAPPRIS P1 TSL 1 (best) BASIC13.25□□□□□ -0.29
Shank1D3YZU1 Gm45244-201ENSMUST00000211328 2200 ntBASIC13.25□□□□□ -0.29
Shank1D3YZU1 Fbxl19-201ENSMUST00000033081 3410 ntAPPRIS P2 TSL 1 (best) BASIC13.25□□□□□ -0.29
Shank1D3YZU1 Zfp74-203ENSMUST00000108211 1278 ntTSL 1 (best) BASIC13.25□□□□□ -0.29
Shank1D3YZU1 Mettl26-203ENSMUST00000163356 534 ntTSL 5 BASIC13.25□□□□□ -0.29
Shank1D3YZU1 Snx24-201ENSMUST00000025417 994 ntAPPRIS P1 TSL 1 (best) BASIC13.25□□□□□ -0.29
Shank1D3YZU1 Gm10244-201ENSMUST00000090237 830 ntTSL 1 (best) BASIC13.25□□□□□ -0.29
Shank1D3YZU1 Mtmr7-202ENSMUST00000048898 2488 ntAPPRIS P1 TSL 1 (best) BASIC13.25□□□□□ -0.29
Shank1D3YZU1 Irf7-201ENSMUST00000026571 1916 ntAPPRIS P3 TSL 1 (best) BASIC13.25□□□□□ -0.29
Shank1D3YZU1 Gm5320-201ENSMUST00000207163 1519 ntBASIC13.25□□□□□ -0.29
Shank1D3YZU1 Acbd6-201ENSMUST00000035560 5592 ntAPPRIS P1 TSL 1 (best) BASIC13.25□□□□□ -0.29
Shank1D3YZU1 Asic4-202ENSMUST00000113577 2667 ntAPPRIS ALT2 TSL 5 BASIC13.25□□□□□ -0.29
Shank1D3YZU1 Apc2-202ENSMUST00000105359 9173 ntAPPRIS ALT2 TSL 5 BASIC13.25□□□□□ -0.29
Shank1D3YZU1 Cyp2d10-201ENSMUST00000072776 1647 ntAPPRIS P1 TSL 1 (best) BASIC13.25□□□□□ -0.29
Shank1D3YZU1 Gm11696-201ENSMUST00000070956 2765 ntTSL 1 (best) BASIC13.25□□□□□ -0.29
Shank1D3YZU1 Tspoap1-202ENSMUST00000100644 7390 ntAPPRIS ALT2 TSL 5 BASIC13.25□□□□□ -0.29
Shank1D3YZU1 Ppp1r12b-202ENSMUST00000086444 3137 ntAPPRIS P2 TSL 5 BASIC13.25□□□□□ -0.29
Shank1D3YZU1 H2-Q10-202ENSMUST00000174525 1991 ntAPPRIS P1 TSL 5 BASIC13.25□□□□□ -0.29
Shank1D3YZU1 Tbxas1-201ENSMUST00000003017 1990 ntAPPRIS P1 TSL 1 (best) BASIC13.25□□□□□ -0.29
Shank1D3YZU1 Samm50-201ENSMUST00000023071 1673 ntAPPRIS P1 TSL 1 (best) BASIC13.24□□□□□ -0.29
Retrieved 100 of 76,532 protein–RNA pairs in 35.8 ms