Protein–RNA interactions for Protein: A6H584

Col6a5, Collagen alpha-5(VI) chain, mousemouse

Predictions only

Length 2,640 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Col6a5A6H584 Tubgcp4-203ENSMUST00000110658 4250 ntAPPRIS ALT1 TSL 1 (best) BASIC11.08□□□□□ -0.64
Col6a5A6H584 Glrx2-210ENSMUST00000185362 3337 ntAPPRIS P4 TSL 1 (best) BASIC11.08□□□□□ -0.64
Col6a5A6H584 Cyp2t4-202ENSMUST00000164093 1512 ntAPPRIS P2 TSL 5 BASIC11.08□□□□□ -0.64
Col6a5A6H584 BC001981-202ENSMUST00000191393 1545 ntBASIC11.08□□□□□ -0.64
Col6a5A6H584 Tubb3-201ENSMUST00000071134 1868 ntAPPRIS P1 TSL 1 (best) BASIC11.08□□□□□ -0.64
Col6a5A6H584 Rbm8a2-201ENSMUST00000104983 1338 ntAPPRIS P1 BASIC11.08□□□□□ -0.64
Col6a5A6H584 Zbtb25-205ENSMUST00000176509 1591 ntTSL 2 BASIC11.08□□□□□ -0.64
Col6a5A6H584 Gm36445-203ENSMUST00000209951 1597 ntTSL 5 BASIC11.08□□□□□ -0.64
Col6a5A6H584 Armc9-205ENSMUST00000131412 2160 ntAPPRIS P1 TSL 1 (best) BASIC11.08□□□□□ -0.64
Col6a5A6H584 Dmc1-201ENSMUST00000023065 2192 ntAPPRIS P1 TSL 1 (best) BASIC11.08□□□□□ -0.64
Col6a5A6H584 Cyp2ab1-205ENSMUST00000182741 1497 ntAPPRIS P1 TSL 5 BASIC11.08□□□□□ -0.64
Col6a5A6H584 Xpr1-202ENSMUST00000111774 2753 ntTSL 1 (best) BASIC11.08□□□□□ -0.64
Col6a5A6H584 Hnrnpr-202ENSMUST00000105850 2683 ntAPPRIS P1 TSL 1 (best) BASIC11.08□□□□□ -0.64
Col6a5A6H584 Hps6-201ENSMUST00000099393 2696 ntAPPRIS P1 BASIC11.08□□□□□ -0.64
Col6a5A6H584 4933409G03Rik-201ENSMUST00000102713 1263 ntAPPRIS P2 TSL 1 (best) BASIC11.07□□□□□ -0.64
Col6a5A6H584 Irak1-204ENSMUST00000114352 3825 ntAPPRIS P3 TSL 1 (best) BASIC11.07□□□□□ -0.64
Col6a5A6H584 Gm12928-201ENSMUST00000117115 573 ntBASIC11.07□□□□□ -0.64
Col6a5A6H584 Gm13442-201ENSMUST00000135749 663 ntTSL 3 BASIC11.07□□□□□ -0.64
Col6a5A6H584 Creb3-206ENSMUST00000167751 1212 ntAPPRIS ALT2 TSL 5 BASIC11.07□□□□□ -0.64
Col6a5A6H584 Gm38804-201ENSMUST00000203998 767 ntTSL 3 BASIC11.07□□□□□ -0.64
Col6a5A6H584 Kcnip2-203ENSMUST00000086993 1005 ntTSL 1 (best) BASIC11.07□□□□□ -0.64
Col6a5A6H584 Camkmt-201ENSMUST00000095188 972 ntAPPRIS P1 TSL 1 (best) BASIC11.07□□□□□ -0.64
Col6a5A6H584 Slc13a3-202ENSMUST00000109279 3131 ntAPPRIS ALT2 TSL 1 (best) BASIC11.07□□□□□ -0.64
Col6a5A6H584 Kif7-202ENSMUST00000178048 4524 ntAPPRIS ALT2 TSL 1 (best) BASIC11.07□□□□□ -0.64
Col6a5A6H584 H2afy2-201ENSMUST00000020283 2175 ntAPPRIS P1 TSL 1 (best) BASIC11.07□□□□□ -0.64
Col6a5A6H584 Wdr45-223ENSMUST00000207675 1335 ntTSL 5 BASIC11.07□□□□□ -0.64
Col6a5A6H584 Senp3-202ENSMUST00000066760 2219 ntAPPRIS P1 TSL 1 (best) BASIC11.07□□□□□ -0.64
Col6a5A6H584 Akt2-214ENSMUST00000167435 2865 ntAPPRIS P1 TSL 1 (best) BASIC11.07□□□□□ -0.64
Col6a5A6H584 Cidec-201ENSMUST00000032416 1703 ntAPPRIS P2 TSL 1 (best) BASIC11.07□□□□□ -0.64
Col6a5A6H584 Ppia-206ENSMUST00000213200 1450 ntTSL 5 BASIC11.07□□□□□ -0.64
Col6a5A6H584 Susd1-201ENSMUST00000040166 3295 ntAPPRIS P2 TSL 1 (best) BASIC11.07□□□□□ -0.64
Col6a5A6H584 Spdya-204ENSMUST00000167641 1891 ntAPPRIS P1 TSL 5 BASIC11.07□□□□□ -0.64
Col6a5A6H584 Spdya-201ENSMUST00000064420 1877 ntTSL 1 (best) BASIC11.07□□□□□ -0.64
Col6a5A6H584 Slc39a11-202ENSMUST00000071539 2664 ntAPPRIS P3 TSL 1 (best) BASIC11.07□□□□□ -0.64
Col6a5A6H584 Fam81a-201ENSMUST00000034749 3703 ntAPPRIS P1 TSL 1 (best) BASIC11.07□□□□□ -0.64
Col6a5A6H584 Zscan12-202ENSMUST00000099720 2182 ntAPPRIS P1 TSL 1 (best) BASIC11.07□□□□□ -0.64
Col6a5A6H584 Cables1-202ENSMUST00000171109 3396 ntAPPRIS ALT2 TSL 1 (best) BASIC11.07□□□□□ -0.64
Col6a5A6H584 Nup98-205ENSMUST00000211022 3132 ntTSL 2 BASIC11.07□□□□□ -0.64
Col6a5A6H584 Gba2-201ENSMUST00000030189 3544 ntAPPRIS P1 TSL 1 (best) BASIC11.07□□□□□ -0.64
Col6a5A6H584 A630072M18Rik-201ENSMUST00000190567 5410 ntBASIC11.07□□□□□ -0.64
Col6a5A6H584 1810043G02Rik-202ENSMUST00000105398 899 ntAPPRIS ALT2 TSL 1 (best) BASIC11.07□□□□□ -0.64
Col6a5A6H584 1700042G07Rik-201ENSMUST00000106492 385 ntAPPRIS P1 TSL 1 (best) BASIC11.07□□□□□ -0.64
Col6a5A6H584 Shf-202ENSMUST00000110530 910 ntAPPRIS ALT2 TSL 5 BASIC11.07□□□□□ -0.64
Col6a5A6H584 Igf1-206ENSMUST00000122100 651 ntTSL 1 (best) BASIC11.07□□□□□ -0.64
Col6a5A6H584 Gm24514-201ENSMUST00000174961 285 ntBASIC11.07□□□□□ -0.64
Col6a5A6H584 Gm45339-201ENSMUST00000210823 877 ntTSL 5 BASIC11.07□□□□□ -0.64
Col6a5A6H584 Sorbs1-213ENSMUST00000225153 3589 ntAPPRIS P4 BASIC11.07□□□□□ -0.64
Col6a5A6H584 Gm43702-201ENSMUST00000198772 2546 ntBASIC11.07□□□□□ -0.64
Col6a5A6H584 Gm15816-201ENSMUST00000141930 1688 ntTSL 1 (best) BASIC11.07□□□□□ -0.64
Col6a5A6H584 Baiap2-204ENSMUST00000106231 4005 ntAPPRIS ALT2 TSL 1 (best) BASIC11.07□□□□□ -0.64
Col6a5A6H584 Pdlim1-201ENSMUST00000068439 2571 ntAPPRIS P1 TSL 1 (best) BASIC11.07□□□□□ -0.64
Col6a5A6H584 P2rx4-201ENSMUST00000031429 2702 ntAPPRIS P1 TSL 1 (best) BASIC11.07□□□□□ -0.64
Col6a5A6H584 Pafah1b3-202ENSMUST00000108410 689 ntTSL 3 BASIC11.06□□□□□ -0.64
Col6a5A6H584 Ndufa3-202ENSMUST00000108644 351 ntTSL 3 BASIC11.06□□□□□ -0.64
Col6a5A6H584 Rhox7-ps1-201ENSMUST00000117595 806 ntBASIC11.06□□□□□ -0.64
Col6a5A6H584 Pdpn-202ENSMUST00000119654 762 ntAPPRIS ALT2 TSL 3 BASIC11.06□□□□□ -0.64
Col6a5A6H584 Rps15-ps2-201ENSMUST00000121788 438 ntBASIC11.06□□□□□ -0.64
Col6a5A6H584 Gm17180-201ENSMUST00000172211 435 ntTSL 3 BASIC11.06□□□□□ -0.64
Col6a5A6H584 Rufy3-205ENSMUST00000198965 3536 ntAPPRIS P1 TSL 1 (best) BASIC11.06□□□□□ -0.64
Col6a5A6H584 Gm8969-201ENSMUST00000199694 526 ntBASIC11.06□□□□□ -0.64
Col6a5A6H584 Gm44632-201ENSMUST00000207245 474 ntTSL 2 BASIC11.06□□□□□ -0.64
Col6a5A6H584 Pole2-201ENSMUST00000021359 1706 ntAPPRIS P1 TSL 1 (best) BASIC11.06□□□□□ -0.64
Col6a5A6H584 Gm18556-201ENSMUST00000219748 1031 ntBASIC11.06□□□□□ -0.64
Col6a5A6H584 Gm9843-201ENSMUST00000052867 504 ntAPPRIS P1 BASIC11.06□□□□□ -0.64
Col6a5A6H584 Krt6b-201ENSMUST00000023786 2226 ntAPPRIS P1 TSL 1 (best) BASIC11.06□□□□□ -0.64
Col6a5A6H584 Fgfr2-207ENSMUST00000117872 4223 ntAPPRIS ALT2 TSL 1 (best) BASIC11.06□□□□□ -0.64
Col6a5A6H584 Mcrs1-202ENSMUST00000163506 1795 ntTSL 1 (best) BASIC11.06□□□□□ -0.64
Col6a5A6H584 Hnrnpa1-202ENSMUST00000087351 1759 ntAPPRIS P1 TSL 1 (best) BASIC11.06□□□□□ -0.64
Col6a5A6H584 Wac-216ENSMUST00000171486 1608 ntTSL 5 BASIC11.06□□□□□ -0.64
Col6a5A6H584 Gm13050-201ENSMUST00000122149 1345 ntBASIC11.06□□□□□ -0.64
Col6a5A6H584 Sprn-201ENSMUST00000059241 3374 ntAPPRIS P1 TSL 1 (best) BASIC11.06□□□□□ -0.64
Col6a5A6H584 Crem-239ENSMUST00000165086 2778 ntTSL 5 BASIC11.06□□□□□ -0.64
Col6a5A6H584 Tmem117-201ENSMUST00000080141 2781 ntAPPRIS P1 TSL 1 (best) BASIC11.06□□□□□ -0.64
Col6a5A6H584 Adamtsl1-201ENSMUST00000048885 1842 ntTSL 5 BASIC11.06□□□□□ -0.64
Col6a5A6H584 Kcmf1-201ENSMUST00000068697 3251 ntAPPRIS P1 TSL 1 (best) BASIC11.06□□□□□ -0.64
Col6a5A6H584 Rab33b-201ENSMUST00000054387 3492 ntAPPRIS P1 TSL 1 (best) BASIC11.06□□□□□ -0.64
Col6a5A6H584 Tbc1d8-201ENSMUST00000054462 4451 ntAPPRIS P2 TSL 1 (best) BASIC11.06□□□□□ -0.64
Col6a5A6H584 Gm16136-203ENSMUST00000162520 1121 ntTSL 2 BASIC11.06□□□□□ -0.64
Col6a5A6H584 Gm38266-201ENSMUST00000194931 421 ntBASIC11.06□□□□□ -0.64
Col6a5A6H584 Gstt2-203ENSMUST00000218500 794 ntTSL 5 BASIC11.06□□□□□ -0.64
Col6a5A6H584 Gm8598-201ENSMUST00000221184 836 ntBASIC11.06□□□□□ -0.64
Col6a5A6H584 AC125117.1-201ENSMUST00000228121 468 ntBASIC11.06□□□□□ -0.64
Col6a5A6H584 Abr-202ENSMUST00000072740 5394 ntAPPRIS P1 TSL 5 BASIC11.06□□□□□ -0.64
Col6a5A6H584 Rhot2-201ENSMUST00000043897 3189 ntAPPRIS P1 TSL 1 (best) BASIC11.06□□□□□ -0.64
Col6a5A6H584 Plaa-201ENSMUST00000107107 2784 ntAPPRIS P1 TSL 1 (best) BASIC11.06□□□□□ -0.64
Col6a5A6H584 Mbp-204ENSMUST00000080658 2063 ntTSL 1 (best) BASIC11.06□□□□□ -0.64
Col6a5A6H584 Plekhh3-206ENSMUST00000164474 3010 ntAPPRIS ALT2 TSL 1 (best) BASIC11.06□□□□□ -0.64
Col6a5A6H584 Zdhhc23-201ENSMUST00000036321 1380 ntTSL 1 (best) BASIC11.06□□□□□ -0.64
Col6a5A6H584 Dclk2-201ENSMUST00000029719 4012 ntAPPRIS P3 TSL 1 (best) BASIC11.06□□□□□ -0.64
Col6a5A6H584 Slc25a29-201ENSMUST00000021693 1976 ntAPPRIS P1 TSL 1 (best) BASIC11.06□□□□□ -0.64
Col6a5A6H584 Pias4-201ENSMUST00000005064 2571 ntAPPRIS P1 TSL 1 (best) BASIC11.06□□□□□ -0.64
Col6a5A6H584 Gm13342-201ENSMUST00000121055 207 ntBASIC11.05□□□□□ -0.64
Col6a5A6H584 Hypk-204ENSMUST00000126764 961 ntAPPRIS P1 TSL 1 (best) BASIC11.05□□□□□ -0.64
Col6a5A6H584 Arf5-202ENSMUST00000169841 768 ntAPPRIS P1 TSL 5 BASIC11.05□□□□□ -0.64
Col6a5A6H584 Gm4819-201ENSMUST00000182170 1009 ntBASIC11.05□□□□□ -0.64
Col6a5A6H584 2610306M01Rik-201ENSMUST00000185414 1042 ntBASIC11.05□□□□□ -0.64
Col6a5A6H584 Gm29264-201ENSMUST00000191240 1264 ntTSL 1 (best) BASIC11.05□□□□□ -0.64
Col6a5A6H584 Pomc-202ENSMUST00000218089 977 ntAPPRIS P1 TSL 1 (best) BASIC11.05□□□□□ -0.64
Col6a5A6H584 Dph3-201ENSMUST00000022461 1057 ntAPPRIS P1 TSL 1 (best) BASIC11.05□□□□□ -0.64
Col6a5A6H584 Mien1-201ENSMUST00000002655 747 ntAPPRIS P1 TSL 1 (best) BASIC11.05□□□□□ -0.64
Retrieved 100 of 76,532 protein–RNA pairs in 28.5 ms