Protein–RNA interactions for Protein: A0N8R1

Trav12-1, T cell receptor alpha variable 12-1 (Fragment), mousemouse

Predictions only

Length 115 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trav12-1A0N8R1 Iffo1-201ENSMUST00000117675 2833 ntAPPRIS P4 TSL 1 (best) BASIC12.38□□□□□ -0.43
Trav12-1A0N8R1 Mon1a-202ENSMUST00000191906 2821 ntTSL 2 BASIC12.38□□□□□ -0.43
Trav12-1A0N8R1 Cpeb2-205ENSMUST00000169035 7050 ntAPPRIS P2 TSL 5 BASIC12.38□□□□□ -0.43
Trav12-1A0N8R1 Dlx6-202ENSMUST00000160937 2216 ntAPPRIS P1 TSL 1 (best) BASIC12.38□□□□□ -0.43
Trav12-1A0N8R1 Anxa2-201ENSMUST00000034756 1447 ntAPPRIS P1 TSL 1 (best) BASIC12.38□□□□□ -0.43
Trav12-1A0N8R1 Chrm4-201ENSMUST00000045537 1440 ntAPPRIS P1 BASIC12.38□□□□□ -0.43
Trav12-1A0N8R1 Rassf10-201ENSMUST00000182858 3496 ntAPPRIS P1 BASIC12.38□□□□□ -0.43
Trav12-1A0N8R1 Rbbp8nl-201ENSMUST00000038529 2319 ntAPPRIS P1 TSL 1 (best) BASIC12.38□□□□□ -0.43
Trav12-1A0N8R1 Zcchc3-201ENSMUST00000099207 3073 ntAPPRIS P1 BASIC12.38□□□□□ -0.43
Trav12-1A0N8R1 Riox2-201ENSMUST00000023407 2159 ntAPPRIS P1 TSL 1 (best) BASIC12.38□□□□□ -0.43
Trav12-1A0N8R1 Ptk7-201ENSMUST00000044442 4255 ntAPPRIS P1 TSL 1 (best) BASIC12.38□□□□□ -0.43
Trav12-1A0N8R1 Rnf141-201ENSMUST00000106682 1101 ntAPPRIS P1 TSL 3 BASIC12.38□□□□□ -0.43
Trav12-1A0N8R1 Gm13418-201ENSMUST00000119097 944 ntBASIC12.38□□□□□ -0.43
Trav12-1A0N8R1 Hbb-bh0-201ENSMUST00000124800 129 ntBASIC12.38□□□□□ -0.43
Trav12-1A0N8R1 Gm12781-201ENSMUST00000146269 395 ntTSL 1 (best) BASIC12.38□□□□□ -0.43
Trav12-1A0N8R1 Gm11615-201ENSMUST00000156205 818 ntTSL 1 (best) BASIC12.38□□□□□ -0.43
Trav12-1A0N8R1 Mocs1-202ENSMUST00000165390 729 ntTSL 1 (best) BASIC12.38□□□□□ -0.43
Trav12-1A0N8R1 Gm4189-202ENSMUST00000174167 367 ntTSL 3 BASIC12.38□□□□□ -0.43
Trav12-1A0N8R1 Gm6089-201ENSMUST00000197666 938 ntBASIC12.38□□□□□ -0.43
Trav12-1A0N8R1 CT010506.4-201ENSMUST00000225457 351 ntBASIC12.38□□□□□ -0.43
Trav12-1A0N8R1 Rpp25l-201ENSMUST00000038434 856 ntAPPRIS P1 TSL 1 (best) BASIC12.38□□□□□ -0.43
Trav12-1A0N8R1 4931422A03Rik-201ENSMUST00000056170 1037 ntAPPRIS P1 TSL 1 (best) BASIC12.38□□□□□ -0.43
Trav12-1A0N8R1 Tsr3-201ENSMUST00000063574 1192 ntAPPRIS P1 TSL 1 (best) BASIC12.38□□□□□ -0.43
Trav12-1A0N8R1 Lce3f-201ENSMUST00000090863 611 ntAPPRIS P1 TSL 1 (best) BASIC12.38□□□□□ -0.43
Trav12-1A0N8R1 Gatm-201ENSMUST00000028624 2389 ntAPPRIS P1 TSL 1 (best) BASIC12.38□□□□□ -0.43
Trav12-1A0N8R1 Snx8-205ENSMUST00000196566 1914 ntAPPRIS ALT2 TSL 5 BASIC12.38□□□□□ -0.43
Trav12-1A0N8R1 Necap2-201ENSMUST00000030760 1906 ntAPPRIS P1 TSL 1 (best) BASIC12.38□□□□□ -0.43
Trav12-1A0N8R1 Nfat5-203ENSMUST00000125721 5899 ntAPPRIS ALT2 TSL 5 BASIC12.38□□□□□ -0.43
Trav12-1A0N8R1 Dnmt3b-202ENSMUST00000072997 4208 ntAPPRIS P4 TSL 1 (best) BASIC12.38□□□□□ -0.43
Trav12-1A0N8R1 Pqlc1-203ENSMUST00000123750 2004 ntAPPRIS ALT2 TSL 1 (best) BASIC12.38□□□□□ -0.43
Trav12-1A0N8R1 Asah1-201ENSMUST00000034000 2773 ntAPPRIS P1 TSL 1 (best) BASIC12.38□□□□□ -0.43
Trav12-1A0N8R1 Smg9-201ENSMUST00000002280 2242 ntAPPRIS P1 TSL 1 (best) BASIC12.38□□□□□ -0.43
Trav12-1A0N8R1 Slc39a4-201ENSMUST00000073428 2224 ntAPPRIS P1 TSL 1 (best) BASIC12.38□□□□□ -0.43
Trav12-1A0N8R1 Fam163b-201ENSMUST00000151224 2959 ntAPPRIS P1 TSL 1 (best) BASIC12.38□□□□□ -0.43
Trav12-1A0N8R1 Krt14-201ENSMUST00000007272 1698 ntAPPRIS P1 TSL 1 (best) BASIC12.38□□□□□ -0.43
Trav12-1A0N8R1 Sumo3-201ENSMUST00000020501 2630 ntAPPRIS P3 TSL 1 (best) BASIC12.38□□□□□ -0.43
Trav12-1A0N8R1 Susd6-201ENSMUST00000068519 4977 ntAPPRIS P2 TSL 1 (best) BASIC12.38□□□□□ -0.43
Trav12-1A0N8R1 Atp2a2-202ENSMUST00000177974 3984 ntAPPRIS ALT1 TSL 1 (best) BASIC12.37□□□□□ -0.43
Trav12-1A0N8R1 Zfp668-204ENSMUST00000106263 3132 ntAPPRIS P1 TSL 1 (best) BASIC12.37□□□□□ -0.43
Trav12-1A0N8R1 Shd-202ENSMUST00000223629 1430 ntAPPRIS P2 BASIC12.37□□□□□ -0.43
Trav12-1A0N8R1 Sacs-201ENSMUST00000089394 3345 ntAPPRIS P2 TSL 1 (best) BASIC12.37□□□□□ -0.43
Trav12-1A0N8R1 Iqck-201ENSMUST00000098087 1503 ntAPPRIS ALT2 TSL 5 BASIC12.37□□□□□ -0.43
Trav12-1A0N8R1 Cacnb4-201ENSMUST00000078324 8225 ntTSL 1 (best) BASIC12.37□□□□□ -0.43
Trav12-1A0N8R1 Dnase2a-201ENSMUST00000003910 1715 ntAPPRIS P2 TSL 1 (best) BASIC12.37□□□□□ -0.43
Trav12-1A0N8R1 Mcfd2-201ENSMUST00000024963 1823 ntAPPRIS P1 TSL 1 (best) BASIC12.37□□□□□ -0.43
Trav12-1A0N8R1 Ffar2-202ENSMUST00000163504 1913 ntAPPRIS P1 TSL 2 BASIC12.37□□□□□ -0.43
Trav12-1A0N8R1 Smpd3-202ENSMUST00000212896 2626 ntAPPRIS P1 TSL 1 (best) BASIC12.37□□□□□ -0.43
Trav12-1A0N8R1 Rspry1-207ENSMUST00000212729 2800 ntTSL 1 (best) BASIC12.37□□□□□ -0.43
Trav12-1A0N8R1 Trmt10c-201ENSMUST00000059052 3002 ntAPPRIS P1 TSL 1 (best) BASIC12.37□□□□□ -0.43
Trav12-1A0N8R1 Selenon-201ENSMUST00000060435 3445 ntAPPRIS P1 TSL 5 BASIC12.37□□□□□ -0.43
Trav12-1A0N8R1 Acss1-201ENSMUST00000028944 3618 ntAPPRIS P1 TSL 1 (best) BASIC12.37□□□□□ -0.43
Trav12-1A0N8R1 Casc3-204ENSMUST00000169695 3741 ntAPPRIS P1 TSL 1 (best) BASIC12.37□□□□□ -0.43
Trav12-1A0N8R1 A930006K02Rik-201ENSMUST00000149172 776 ntTSL 1 (best) BASIC12.37□□□□□ -0.43
Trav12-1A0N8R1 Gm14964-202ENSMUST00000149574 716 ntTSL 1 (best) BASIC12.37□□□□□ -0.43
Trav12-1A0N8R1 Rbm14-203ENSMUST00000180008 370 ntTSL 5 BASIC12.37□□□□□ -0.43
Trav12-1A0N8R1 Gm26620-201ENSMUST00000180542 817 ntAPPRIS P1 BASIC12.37□□□□□ -0.43
Trav12-1A0N8R1 AC140264.2-201ENSMUST00000219668 289 ntTSL 2 BASIC12.37□□□□□ -0.43
Trav12-1A0N8R1 Rpl8-201ENSMUST00000004072 862 ntAPPRIS P1 TSL 1 (best) BASIC12.37□□□□□ -0.43
Trav12-1A0N8R1 Insl6-201ENSMUST00000052380 708 ntAPPRIS P1 TSL 1 (best) BASIC12.37□□□□□ -0.43
Trav12-1A0N8R1 Gsdmcl1-201ENSMUST00000071847 1133 ntTSL 1 (best) BASIC12.37□□□□□ -0.43
Trav12-1A0N8R1 Sdhc-201ENSMUST00000081560 815 ntTSL 3 BASIC12.37□□□□□ -0.43
Trav12-1A0N8R1 Tacc1-202ENSMUST00000084512 6471 ntAPPRIS ALT2 TSL 1 (best) BASIC12.37□□□□□ -0.43
Trav12-1A0N8R1 Terf1-201ENSMUST00000027057 1581 ntTSL 1 (best) BASIC12.37□□□□□ -0.43
Trav12-1A0N8R1 Dbndd1-201ENSMUST00000176155 1677 ntAPPRIS P1 TSL 1 (best) BASIC12.37□□□□□ -0.43
Trav12-1A0N8R1 Mcrs1-202ENSMUST00000163506 1795 ntTSL 1 (best) BASIC12.37□□□□□ -0.43
Trav12-1A0N8R1 Skap1-205ENSMUST00000107662 1861 ntTSL 1 (best) BASIC12.37□□□□□ -0.43
Trav12-1A0N8R1 Mfng-201ENSMUST00000018313 1865 ntAPPRIS P1 TSL 1 (best) BASIC12.37□□□□□ -0.43
Trav12-1A0N8R1 Irf1-201ENSMUST00000019043 2069 ntAPPRIS P3 TSL 1 (best) BASIC12.37□□□□□ -0.43
Trav12-1A0N8R1 Las1l-202ENSMUST00000113864 2581 ntAPPRIS ALT2 TSL 5 BASIC12.37□□□□□ -0.43
Trav12-1A0N8R1 Sh2b1-205ENSMUST00000205733 2956 ntAPPRIS ALT2 TSL 1 (best) BASIC12.37□□□□□ -0.43
Trav12-1A0N8R1 Gnpat-201ENSMUST00000034466 2984 ntAPPRIS P1 TSL 1 (best) BASIC12.37□□□□□ -0.43
Trav12-1A0N8R1 Cpne1-203ENSMUST00000109608 3492 ntAPPRIS P1 TSL 1 (best) BASIC12.37□□□□□ -0.43
Trav12-1A0N8R1 Iffo1-202ENSMUST00000119527 2840 ntAPPRIS ALT2 TSL 1 (best) BASIC12.37□□□□□ -0.43
Trav12-1A0N8R1 Rnf180-203ENSMUST00000224662 2734 ntAPPRIS ALT2 BASIC12.37□□□□□ -0.43
Trav12-1A0N8R1 Efcab14-202ENSMUST00000106522 2636 ntTSL 1 (best) BASIC12.37□□□□□ -0.43
Trav12-1A0N8R1 Kcnc1-201ENSMUST00000025202 7760 ntTSL 1 (best) BASIC12.37□□□□□ -0.43
Trav12-1A0N8R1 Ftcd-201ENSMUST00000001183 1933 ntAPPRIS P1 TSL 1 (best) BASIC12.37□□□□□ -0.43
Trav12-1A0N8R1 Cyp4f18-201ENSMUST00000003574 1702 ntAPPRIS P1 TSL 1 (best) BASIC12.37□□□□□ -0.43
Trav12-1A0N8R1 3830417A13Rik-201ENSMUST00000033522 1649 ntAPPRIS P1 TSL 1 (best) BASIC12.37□□□□□ -0.43
Trav12-1A0N8R1 Bag6-201ENSMUST00000025250 3858 ntAPPRIS P3 TSL 5 BASIC12.37□□□□□ -0.43
Trav12-1A0N8R1 Fbxl19-203ENSMUST00000186207 3178 ntAPPRIS P2 TSL 1 (best) BASIC12.36□□□□□ -0.43
Trav12-1A0N8R1 Ano7-201ENSMUST00000058682 2963 ntAPPRIS ALT2 TSL 1 (best) BASIC12.36□□□□□ -0.43
Trav12-1A0N8R1 Bbs7-203ENSMUST00000108156 2687 ntAPPRIS P2 TSL 1 (best) BASIC12.36□□□□□ -0.43
Trav12-1A0N8R1 Parp3-203ENSMUST00000123555 2495 ntAPPRIS P3 TSL 1 (best) BASIC12.36□□□□□ -0.43
Trav12-1A0N8R1 Ppp1r15b-201ENSMUST00000052529 5594 ntAPPRIS P1 TSL 1 (best) BASIC12.36□□□□□ -0.43
Trav12-1A0N8R1 Gng2-204ENSMUST00000160013 3826 ntAPPRIS P1 TSL 1 (best) BASIC12.36□□□□□ -0.43
Trav12-1A0N8R1 Aldh1b1-201ENSMUST00000044384 2298 ntAPPRIS P1 TSL 1 (best) BASIC12.36□□□□□ -0.43
Trav12-1A0N8R1 Zbtb14-201ENSMUST00000062369 3625 ntAPPRIS P1 TSL 1 (best) BASIC12.36□□□□□ -0.43
Trav12-1A0N8R1 Vta1-205ENSMUST00000154132 1974 ntAPPRIS P2 TSL 1 (best) BASIC12.36□□□□□ -0.43
Trav12-1A0N8R1 Fundc1-201ENSMUST00000026016 1983 ntAPPRIS P1 TSL 1 (best) BASIC12.36□□□□□ -0.43
Trav12-1A0N8R1 Mast2-201ENSMUST00000003908 5445 ntAPPRIS ALT2 TSL 1 (best) BASIC12.36□□□□□ -0.43
Trav12-1A0N8R1 Pdia2-202ENSMUST00000120333 1661 ntAPPRIS ALT2 TSL 1 (best) BASIC12.36□□□□□ -0.43
Trav12-1A0N8R1 Cyb561a3-201ENSMUST00000168445 1474 ntAPPRIS P1 TSL 5 BASIC12.36□□□□□ -0.43
Trav12-1A0N8R1 Nkapl-201ENSMUST00000068235 1463 ntAPPRIS P1 BASIC12.36□□□□□ -0.43
Trav12-1A0N8R1 Trmt1-205ENSMUST00000125370 2114 ntAPPRIS ALT2 TSL 5 BASIC12.36□□□□□ -0.43
Trav12-1A0N8R1 Blvrb-204ENSMUST00000133750 509 ntTSL 2 BASIC12.36□□□□□ -0.43
Trav12-1A0N8R1 Tulp3-205ENSMUST00000157005 1053 ntTSL 1 (best) BASIC12.36□□□□□ -0.43
Trav12-1A0N8R1 1700023H06Rik-201ENSMUST00000161006 1044 ntTSL 1 (best) BASIC12.36□□□□□ -0.43
Trav12-1A0N8R1 Gm5682-201ENSMUST00000173402 505 ntBASIC12.36□□□□□ -0.43
Trav12-1A0N8R1 Ankrd23-204ENSMUST00000194853 1073 ntTSL 1 (best) BASIC12.36□□□□□ -0.43
Retrieved 100 of 76,532 protein–RNA pairs in 42.8 ms