Protein–RNA interactions for Protein: A0A0G2JFX3

Trav13d-4, T cell receptor alpha variable 13D-4 (Fragment), mousemouse

Predictions only

Length 110 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trav13d-4A0A0G2JFX3 Fgf13-203ENSMUST00000119833 2237 ntTSL 5 BASIC10.24□□□□□ -0.77
Trav13d-4A0A0G2JFX3 Cecr2-202ENSMUST00000112686 9212 ntAPPRIS P2 TSL 5 BASIC10.24□□□□□ -0.77
Trav13d-4A0A0G2JFX3 Lzts3-203ENSMUST00000110260 3827 ntAPPRIS ALT2 TSL 1 (best) BASIC10.24□□□□□ -0.77
Trav13d-4A0A0G2JFX3 Adal-203ENSMUST00000110662 1231 ntTSL 5 BASIC10.24□□□□□ -0.77
Trav13d-4A0A0G2JFX3 Rps15-ps2-201ENSMUST00000121788 438 ntBASIC10.24□□□□□ -0.77
Trav13d-4A0A0G2JFX3 Gm12497-201ENSMUST00000138778 237 ntBASIC10.24□□□□□ -0.77
Trav13d-4A0A0G2JFX3 Tsc22d1-208ENSMUST00000142683 797 ntTSL 3 BASIC10.24□□□□□ -0.77
Trav13d-4A0A0G2JFX3 Mpst-202ENSMUST00000167140 1279 ntAPPRIS P1 TSL 5 BASIC10.24□□□□□ -0.77
Trav13d-4A0A0G2JFX3 Gm26871-202ENSMUST00000180774 695 ntTSL 2 BASIC10.24□□□□□ -0.77
Trav13d-4A0A0G2JFX3 Gm29501-201ENSMUST00000186133 530 ntTSL 5 BASIC10.24□□□□□ -0.77
Trav13d-4A0A0G2JFX3 AC122024.2-201ENSMUST00000220086 871 ntBASIC10.24□□□□□ -0.77
Trav13d-4A0A0G2JFX3 AC171004.1-201ENSMUST00000221723 664 ntTSL 3 BASIC10.24□□□□□ -0.77
Trav13d-4A0A0G2JFX3 AC158538.2-201ENSMUST00000225455 906 ntBASIC10.24□□□□□ -0.77
Trav13d-4A0A0G2JFX3 AC154532.1-201ENSMUST00000227860 965 ntBASIC10.24□□□□□ -0.77
Trav13d-4A0A0G2JFX3 Ube2t-201ENSMUST00000027687 1116 ntAPPRIS P1 TSL 1 (best) BASIC10.24□□□□□ -0.77
Trav13d-4A0A0G2JFX3 Sult2b1-201ENSMUST00000075571 1193 ntAPPRIS P2 TSL 1 (best) BASIC10.24□□□□□ -0.77
Trav13d-4A0A0G2JFX3 Fam228b-201ENSMUST00000053458 2851 ntAPPRIS P2 TSL 1 (best) BASIC10.24□□□□□ -0.77
Trav13d-4A0A0G2JFX3 Foxp1-208ENSMUST00000113329 1926 ntTSL 1 (best) BASIC10.24□□□□□ -0.77
Trav13d-4A0A0G2JFX3 Gm15512-201ENSMUST00000137359 2257 ntTSL 1 (best) BASIC10.24□□□□□ -0.77
Trav13d-4A0A0G2JFX3 Vcan-205ENSMUST00000159337 2273 ntTSL 1 (best) BASIC10.24□□□□□ -0.77
Trav13d-4A0A0G2JFX3 Pxdn-202ENSMUST00000122328 6614 ntAPPRIS P1 TSL 1 (best) BASIC10.24□□□□□ -0.77
Trav13d-4A0A0G2JFX3 Atp13a2-201ENSMUST00000037055 3956 ntAPPRIS P3 TSL 1 (best) BASIC10.24□□□□□ -0.77
Trav13d-4A0A0G2JFX3 Trim11-203ENSMUST00000108810 2301 ntTSL 1 (best) BASIC10.24□□□□□ -0.77
Trav13d-4A0A0G2JFX3 Rnaseh2a-203ENSMUST00000109738 2044 ntAPPRIS P1 TSL 1 (best) BASIC10.24□□□□□ -0.77
Trav13d-4A0A0G2JFX3 Anxa4-201ENSMUST00000001187 2002 ntAPPRIS P1 TSL 1 (best) BASIC10.24□□□□□ -0.77
Trav13d-4A0A0G2JFX3 9330182L06Rik-202ENSMUST00000115348 3403 ntAPPRIS ALT2 TSL 1 (best) BASIC10.24□□□□□ -0.77
Trav13d-4A0A0G2JFX3 Arrb2-203ENSMUST00000102563 1352 ntAPPRIS P1 TSL 1 (best) BASIC10.24□□□□□ -0.77
Trav13d-4A0A0G2JFX3 Ch25h-201ENSMUST00000050562 1350 ntAPPRIS P1 BASIC10.24□□□□□ -0.77
Trav13d-4A0A0G2JFX3 Mus81-202ENSMUST00000124334 2067 ntAPPRIS P1 TSL 1 (best) BASIC10.24□□□□□ -0.77
Trav13d-4A0A0G2JFX3 Nyap1-204ENSMUST00000212152 2499 ntAPPRIS ALT2 TSL 1 (best) BASIC10.24□□□□□ -0.77
Trav13d-4A0A0G2JFX3 Polg-201ENSMUST00000073889 7837 ntAPPRIS P1 TSL 1 (best) BASIC10.24□□□□□ -0.77
Trav13d-4A0A0G2JFX3 Rnf168-201ENSMUST00000014218 3932 ntAPPRIS ALT2 TSL 1 (best) BASIC10.24□□□□□ -0.77
Trav13d-4A0A0G2JFX3 Arhgap33-203ENSMUST00000207858 4337 ntAPPRIS ALT2 TSL 1 (best) BASIC10.24□□□□□ -0.77
Trav13d-4A0A0G2JFX3 Vps72-201ENSMUST00000009102 1456 ntAPPRIS P1 TSL 1 (best) BASIC10.23□□□□□ -0.77
Trav13d-4A0A0G2JFX3 Mxra8-201ENSMUST00000030947 2203 ntAPPRIS P1 TSL 1 (best) BASIC10.23□□□□□ -0.77
Trav13d-4A0A0G2JFX3 Dnajc28-201ENSMUST00000049244 1891 ntAPPRIS ALT2 TSL 1 (best) BASIC10.23□□□□□ -0.77
Trav13d-4A0A0G2JFX3 Epb41-208ENSMUST00000105981 5303 ntAPPRIS P3 TSL 5 BASIC10.23□□□□□ -0.77
Trav13d-4A0A0G2JFX3 Sp2-203ENSMUST00000107624 3055 ntAPPRIS P2 TSL 1 (best) BASIC10.23□□□□□ -0.77
Trav13d-4A0A0G2JFX3 Dtx3-201ENSMUST00000038217 1944 ntAPPRIS P2 TSL 1 (best) BASIC10.23□□□□□ -0.77
Trav13d-4A0A0G2JFX3 Zfp628-201ENSMUST00000116354 3523 ntAPPRIS P1 TSL 1 (best) BASIC10.23□□□□□ -0.77
Trav13d-4A0A0G2JFX3 Tmem40-202ENSMUST00000112946 1554 ntAPPRIS ALT2 TSL 1 (best) BASIC10.23□□□□□ -0.77
Trav13d-4A0A0G2JFX3 Lrp11-203ENSMUST00000130590 3220 ntAPPRIS ALT2 TSL 1 (best) BASIC10.23□□□□□ -0.77
Trav13d-4A0A0G2JFX3 Vps53-201ENSMUST00000056601 2833 ntAPPRIS P1 TSL 1 (best) BASIC10.23□□□□□ -0.77
Trav13d-4A0A0G2JFX3 Dcaf10-204ENSMUST00000155551 7250 ntAPPRIS P1 TSL 1 (best) BASIC10.23□□□□□ -0.77
Trav13d-4A0A0G2JFX3 Slc46a3-201ENSMUST00000031655 2434 ntAPPRIS P1 TSL 1 (best) BASIC10.23□□□□□ -0.77
Trav13d-4A0A0G2JFX3 Dnajc9-201ENSMUST00000022345 1631 ntAPPRIS P1 TSL 1 (best) BASIC10.23□□□□□ -0.77
Trav13d-4A0A0G2JFX3 Mir142hg-201ENSMUST00000123700 269 ntTSL 1 (best) BASIC10.23□□□□□ -0.77
Trav13d-4A0A0G2JFX3 Calu-207ENSMUST00000173216 673 ntTSL 5 BASIC10.23□□□□□ -0.77
Trav13d-4A0A0G2JFX3 Jpx-202ENSMUST00000182447 712 ntTSL 3 BASIC10.23□□□□□ -0.77
Trav13d-4A0A0G2JFX3 Hist1h2bc-201ENSMUST00000018246 1156 ntAPPRIS P1 TSL 1 (best) BASIC10.23□□□□□ -0.77
Trav13d-4A0A0G2JFX3 Mir7071-201ENSMUST00000184847 69 ntBASIC10.23□□□□□ -0.77
Trav13d-4A0A0G2JFX3 Smim22-208ENSMUST00000185147 399 ntAPPRIS ALT2 TSL 2 BASIC10.23□□□□□ -0.77
Trav13d-4A0A0G2JFX3 AC108846.1-201ENSMUST00000214531 513 ntBASIC10.23□□□□□ -0.77
Trav13d-4A0A0G2JFX3 1700022H01Rik-201ENSMUST00000219142 387 ntTSL 1 (best) BASIC10.23□□□□□ -0.77
Trav13d-4A0A0G2JFX3 Cmtm5-203ENSMUST00000227441 610 ntBASIC10.23□□□□□ -0.77
Trav13d-4A0A0G2JFX3 Otx2os1-206ENSMUST00000228153 787 ntBASIC10.23□□□□□ -0.77
Trav13d-4A0A0G2JFX3 Insl3-201ENSMUST00000034261 623 ntAPPRIS P1 TSL 1 (best) BASIC10.23□□□□□ -0.77
Trav13d-4A0A0G2JFX3 Apof-201ENSMUST00000050901 1258 ntAPPRIS P1 TSL 1 (best) BASIC10.23□□□□□ -0.77
Trav13d-4A0A0G2JFX3 Hist1h2ba-201ENSMUST00000052776 384 ntAPPRIS P1 BASIC10.23□□□□□ -0.77
Trav13d-4A0A0G2JFX3 2610206C17Rik-201ENSMUST00000129059 1717 ntTSL 2 BASIC10.23□□□□□ -0.77
Trav13d-4A0A0G2JFX3 Gm26534-201ENSMUST00000181687 1724 ntTSL 1 (best) BASIC10.23□□□□□ -0.77
Trav13d-4A0A0G2JFX3 Tbx15-201ENSMUST00000029462 3566 ntAPPRIS P1 TSL 1 (best) BASIC10.23□□□□□ -0.77
Trav13d-4A0A0G2JFX3 Eif4g1-205ENSMUST00000115461 5507 ntAPPRIS ALT2 TSL 5 BASIC10.23□□□□□ -0.77
Trav13d-4A0A0G2JFX3 Gm11190-201ENSMUST00000132487 3414 ntTSL 1 (best) BASIC10.23□□□□□ -0.77
Trav13d-4A0A0G2JFX3 Fbxo28-201ENSMUST00000051431 4925 ntAPPRIS P1 TSL 1 (best) BASIC10.23□□□□□ -0.77
Trav13d-4A0A0G2JFX3 Mtif3-202ENSMUST00000066675 4927 ntAPPRIS P1 TSL 1 (best) BASIC10.23□□□□□ -0.77
Trav13d-4A0A0G2JFX3 Fam163b-201ENSMUST00000151224 2959 ntAPPRIS P1 TSL 1 (best) BASIC10.23□□□□□ -0.77
Trav13d-4A0A0G2JFX3 Naa30-201ENSMUST00000037362 4464 ntAPPRIS ALT2 TSL 5 BASIC10.23□□□□□ -0.77
Trav13d-4A0A0G2JFX3 Rprd1b-202ENSMUST00000103123 4504 ntAPPRIS P3 TSL 1 (best) BASIC10.23□□□□□ -0.77
Trav13d-4A0A0G2JFX3 Polr3d-202ENSMUST00000180358 2032 ntAPPRIS P1 TSL 1 (best) BASIC10.23□□□□□ -0.77
Trav13d-4A0A0G2JFX3 Trmu-201ENSMUST00000023019 1526 ntAPPRIS P1 TSL 1 (best) BASIC10.23□□□□□ -0.77
Trav13d-4A0A0G2JFX3 Zyg11b-201ENSMUST00000043616 8691 ntAPPRIS P1 TSL 1 (best) BASIC10.23□□□□□ -0.77
Trav13d-4A0A0G2JFX3 Daxx-201ENSMUST00000079421 2580 ntAPPRIS P2 TSL 1 (best) BASIC10.22□□□□□ -0.77
Trav13d-4A0A0G2JFX3 Nab1-205ENSMUST00000186764 3640 ntAPPRIS ALT1 TSL 5 BASIC10.22□□□□□ -0.77
Trav13d-4A0A0G2JFX3 Gal3st4-202ENSMUST00000161279 2059 ntAPPRIS P3 TSL 3 BASIC10.22□□□□□ -0.77
Trav13d-4A0A0G2JFX3 Fbxl12-205ENSMUST00000140702 1555 ntBASIC10.22□□□□□ -0.77
Trav13d-4A0A0G2JFX3 Atp6v1c2-201ENSMUST00000020884 1569 ntTSL 1 (best) BASIC10.22□□□□□ -0.77
Trav13d-4A0A0G2JFX3 Pcdha6-202ENSMUST00000193777 5367 ntAPPRIS P2 TSL 1 (best) BASIC10.22□□□□□ -0.77
Trav13d-4A0A0G2JFX3 Ints3-203ENSMUST00000196530 3778 ntAPPRIS ALT2 TSL 1 (best) BASIC10.22□□□□□ -0.77
Trav13d-4A0A0G2JFX3 Maea-201ENSMUST00000114449 2193 ntAPPRIS P1 TSL 1 (best) BASIC10.22□□□□□ -0.77
Trav13d-4A0A0G2JFX3 Slc25a46-201ENSMUST00000060396 4371 ntAPPRIS P1 TSL 1 (best) BASIC10.22□□□□□ -0.77
Trav13d-4A0A0G2JFX3 Arhgef5-201ENSMUST00000031750 5469 ntAPPRIS P1 TSL 5 BASIC10.22□□□□□ -0.77
Trav13d-4A0A0G2JFX3 Cers5-202ENSMUST00000109035 2775 ntAPPRIS ALT2 TSL 1 (best) BASIC10.22□□□□□ -0.77
Trav13d-4A0A0G2JFX3 Cpsf6-206ENSMUST00000176670 2227 ntTSL 5 BASIC10.22□□□□□ -0.77
Trav13d-4A0A0G2JFX3 Gpr88-201ENSMUST00000090473 3469 ntAPPRIS P1 TSL 1 (best) BASIC10.22□□□□□ -0.77
Trav13d-4A0A0G2JFX3 Gm43195-201ENSMUST00000200614 2332 ntBASIC10.22□□□□□ -0.77
Trav13d-4A0A0G2JFX3 Slc13a3-201ENSMUST00000029208 3524 ntAPPRIS P2 TSL 1 (best) BASIC10.22□□□□□ -0.77
Trav13d-4A0A0G2JFX3 Rbbp8-201ENSMUST00000047322 3618 ntAPPRIS P1 TSL 1 (best) BASIC10.22□□□□□ -0.77
Trav13d-4A0A0G2JFX3 Gm42632-201ENSMUST00000201707 2411 ntBASIC10.22□□□□□ -0.77
Trav13d-4A0A0G2JFX3 Pola2-201ENSMUST00000025752 2424 ntAPPRIS P1 TSL 1 (best) BASIC10.22□□□□□ -0.77
Trav13d-4A0A0G2JFX3 Arf1-201ENSMUST00000061242 1800 ntAPPRIS P1 TSL 1 (best) BASIC10.22□□□□□ -0.77
Trav13d-4A0A0G2JFX3 Pds5b-201ENSMUST00000016569 7417 ntAPPRIS P3 TSL 1 (best) BASIC10.22□□□□□ -0.77
Trav13d-4A0A0G2JFX3 Nop56-202ENSMUST00000103198 1877 ntAPPRIS P1 TSL 1 (best) BASIC10.22□□□□□ -0.77
Trav13d-4A0A0G2JFX3 Wbp2-202ENSMUST00000106444 1012 ntTSL 2 BASIC10.22□□□□□ -0.77
Trav13d-4A0A0G2JFX3 Fhad1os2-201ENSMUST00000152351 945 ntTSL 1 (best) BASIC10.22□□□□□ -0.77
Trav13d-4A0A0G2JFX3 Gm27704-201ENSMUST00000185094 107 ntBASIC10.22□□□□□ -0.77
Trav13d-4A0A0G2JFX3 Gm8655-201ENSMUST00000221159 852 ntBASIC10.22□□□□□ -0.77
Trav13d-4A0A0G2JFX3 Atp5l-201ENSMUST00000043675 544 ntAPPRIS P1 TSL 1 (best) BASIC10.22□□□□□ -0.77
Trav13d-4A0A0G2JFX3 Slc25a43-201ENSMUST00000047655 1111 ntAPPRIS P1 TSL 1 (best) BASIC10.22□□□□□ -0.77
Trav13d-4A0A0G2JFX3 Gpank1-201ENSMUST00000052167 1295 ntAPPRIS P3 TSL 1 (best) BASIC10.22□□□□□ -0.77
Retrieved 100 of 76,532 protein–RNA pairs in 32.3 ms