Protein–RNA interactions for Protein: A0A0G2JEU8

Trav13n-1, T cell receptor alpha variable 13N-1 (Fragment), mousemouse

Predictions only

Length 110 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trav13n-1A0A0G2JEU8 Meioc-201ENSMUST00000100378 4573 ntAPPRIS P1 TSL 5 BASIC10.78□□□□□ -0.68
Trav13n-1A0A0G2JEU8 Phf8-204ENSMUST00000112666 2556 ntAPPRIS ALT2 TSL 1 (best) BASIC10.78□□□□□ -0.68
Trav13n-1A0A0G2JEU8 Fuz-213ENSMUST00000209039 1453 ntTSL 5 BASIC10.78□□□□□ -0.68
Trav13n-1A0A0G2JEU8 Pard6b-201ENSMUST00000052125 3399 ntAPPRIS P1 TSL 1 (best) BASIC10.78□□□□□ -0.68
Trav13n-1A0A0G2JEU8 Mef2b-203ENSMUST00000110143 1312 ntAPPRIS ALT2 TSL 1 (best) BASIC10.78□□□□□ -0.68
Trav13n-1A0A0G2JEU8 Nt5e-201ENSMUST00000034992 3995 ntAPPRIS P1 TSL 1 (best) BASIC10.78□□□□□ -0.68
Trav13n-1A0A0G2JEU8 Trmu-201ENSMUST00000023019 1526 ntAPPRIS P1 TSL 1 (best) BASIC10.78□□□□□ -0.68
Trav13n-1A0A0G2JEU8 Slc38a1-201ENSMUST00000088452 7266 ntAPPRIS P1 TSL 1 (best) BASIC10.78□□□□□ -0.68
Trav13n-1A0A0G2JEU8 Sf3b4-201ENSMUST00000076372 1915 ntAPPRIS P1 TSL 1 (best) BASIC10.78□□□□□ -0.68
Trav13n-1A0A0G2JEU8 Lonrf3-201ENSMUST00000016383 2911 ntAPPRIS P1 TSL 1 (best) BASIC10.78□□□□□ -0.68
Trav13n-1A0A0G2JEU8 Col2a1-202ENSMUST00000088355 4862 ntAPPRIS P1 TSL 1 (best) BASIC10.78□□□□□ -0.68
Trav13n-1A0A0G2JEU8 Gm5648-201ENSMUST00000122244 1587 ntBASIC10.77□□□□□ -0.68
Trav13n-1A0A0G2JEU8 Reep4-201ENSMUST00000047218 1565 ntAPPRIS P1 TSL 1 (best) BASIC10.77□□□□□ -0.68
Trav13n-1A0A0G2JEU8 Zbtb46-201ENSMUST00000029106 5309 ntAPPRIS P1 TSL 5 BASIC10.77□□□□□ -0.68
Trav13n-1A0A0G2JEU8 Cadm2-203ENSMUST00000120898 2768 ntTSL 1 (best) BASIC10.77□□□□□ -0.68
Trav13n-1A0A0G2JEU8 Ccnj-202ENSMUST00000119316 3763 ntAPPRIS P1 TSL 5 BASIC10.77□□□□□ -0.68
Trav13n-1A0A0G2JEU8 1700034H15Rik-202ENSMUST00000139827 4354 ntTSL 5 BASIC10.77□□□□□ -0.68
Trav13n-1A0A0G2JEU8 Dlg4-201ENSMUST00000018700 3204 ntAPPRIS P3 TSL 1 (best) BASIC10.77□□□□□ -0.68
Trav13n-1A0A0G2JEU8 Ccdc68-201ENSMUST00000043929 1618 ntAPPRIS P2 TSL 1 (best) BASIC10.77□□□□□ -0.68
Trav13n-1A0A0G2JEU8 Etv3-202ENSMUST00000119109 5309 ntAPPRIS P2 TSL 1 (best) BASIC10.77□□□□□ -0.68
Trav13n-1A0A0G2JEU8 Clgn-202ENSMUST00000109831 2293 ntAPPRIS P1 TSL 1 (best) BASIC10.77□□□□□ -0.69
Trav13n-1A0A0G2JEU8 Muc3a-201ENSMUST00000179412 1881 ntAPPRIS ALT2 TSL 1 (best) BASIC10.77□□□□□ -0.69
Trav13n-1A0A0G2JEU8 Spdya-201ENSMUST00000064420 1877 ntTSL 1 (best) BASIC10.77□□□□□ -0.69
Trav13n-1A0A0G2JEU8 Gm39027-201ENSMUST00000208560 2942 ntTSL 5 BASIC10.77□□□□□ -0.69
Trav13n-1A0A0G2JEU8 Flt4-201ENSMUST00000020617 6255 ntAPPRIS P1 TSL 1 (best) BASIC10.77□□□□□ -0.69
Trav13n-1A0A0G2JEU8 Gpr160-207ENSMUST00000166278 1689 ntAPPRIS P1 TSL 1 (best) BASIC10.77□□□□□ -0.69
Trav13n-1A0A0G2JEU8 Gm26793-201ENSMUST00000180930 2732 ntTSL 1 (best) BASIC10.77□□□□□ -0.69
Trav13n-1A0A0G2JEU8 Aldh1a3-203ENSMUST00000174209 1496 ntTSL 1 (best) BASIC10.77□□□□□ -0.69
Trav13n-1A0A0G2JEU8 Fam103a1-201ENSMUST00000042166 1452 ntAPPRIS P1 TSL 1 (best) BASIC10.77□□□□□ -0.69
Trav13n-1A0A0G2JEU8 Dio1-202ENSMUST00000106748 396 ntTSL 5 BASIC10.77□□□□□ -0.69
Trav13n-1A0A0G2JEU8 Dlk1-203ENSMUST00000109842 1129 ntTSL 1 (best) BASIC10.77□□□□□ -0.69
Trav13n-1A0A0G2JEU8 Gm14722-201ENSMUST00000118943 689 ntBASIC10.77□□□□□ -0.69
Trav13n-1A0A0G2JEU8 Gm11795-201ENSMUST00000127180 396 ntTSL 5 BASIC10.77□□□□□ -0.69
Trav13n-1A0A0G2JEU8 Btf3-204ENSMUST00000134542 780 ntAPPRIS P1 TSL 2 BASIC10.77□□□□□ -0.69
Trav13n-1A0A0G2JEU8 Pcp2-204ENSMUST00000136105 504 ntAPPRIS P4 TSL 1 (best) BASIC10.77□□□□□ -0.69
Trav13n-1A0A0G2JEU8 Prss45-202ENSMUST00000146794 1208 ntAPPRIS ALT2 TSL 1 (best) BASIC10.77□□□□□ -0.69
Trav13n-1A0A0G2JEU8 A430093F15Rik-205ENSMUST00000188480 509 ntTSL 3 BASIC10.77□□□□□ -0.69
Trav13n-1A0A0G2JEU8 Gm29456-201ENSMUST00000189894 768 ntTSL 3 BASIC10.77□□□□□ -0.69
Trav13n-1A0A0G2JEU8 Gm44945-201ENSMUST00000206764 1187 ntBASIC10.77□□□□□ -0.69
Trav13n-1A0A0G2JEU8 AC154572.2-201ENSMUST00000225105 997 ntBASIC10.77□□□□□ -0.69
Trav13n-1A0A0G2JEU8 Cnksr2-202ENSMUST00000112513 4471 ntTSL 5 BASIC10.77□□□□□ -0.69
Trav13n-1A0A0G2JEU8 Zkscan3-201ENSMUST00000070785 2561 ntAPPRIS P1 TSL 1 (best) BASIC10.77□□□□□ -0.69
Trav13n-1A0A0G2JEU8 Slc43a3-201ENSMUST00000090726 2583 ntAPPRIS P1 TSL 1 (best) BASIC10.77□□□□□ -0.69
Trav13n-1A0A0G2JEU8 Dagla-201ENSMUST00000039327 5634 ntAPPRIS P1 TSL 5 BASIC10.77□□□□□ -0.69
Trav13n-1A0A0G2JEU8 Mef2d-204ENSMUST00000119251 3488 ntTSL 5 BASIC10.77□□□□□ -0.69
Trav13n-1A0A0G2JEU8 Lipo3-202ENSMUST00000112508 2839 ntAPPRIS P1 TSL 1 (best) BASIC10.77□□□□□ -0.69
Trav13n-1A0A0G2JEU8 Acbd5-215ENSMUST00000228050 4804 ntAPPRIS ALT2 BASIC10.77□□□□□ -0.69
Trav13n-1A0A0G2JEU8 Dkk1-201ENSMUST00000025803 2427 ntAPPRIS P1 TSL 1 (best) BASIC10.77□□□□□ -0.69
Trav13n-1A0A0G2JEU8 Gm14026-201ENSMUST00000120625 1789 ntBASIC10.77□□□□□ -0.69
Trav13n-1A0A0G2JEU8 Lamp2-201ENSMUST00000016678 1769 ntAPPRIS ALT2 TSL 1 (best) BASIC10.77□□□□□ -0.69
Trav13n-1A0A0G2JEU8 Grik5-201ENSMUST00000003468 3763 ntAPPRIS P1 TSL 1 (best) BASIC10.77□□□□□ -0.69
Trav13n-1A0A0G2JEU8 Hoxaas3-202ENSMUST00000136806 2207 ntTSL 1 (best) BASIC10.77□□□□□ -0.69
Trav13n-1A0A0G2JEU8 Tnn-201ENSMUST00000039178 5817 ntAPPRIS P1 TSL 1 (best) BASIC10.77□□□□□ -0.69
Trav13n-1A0A0G2JEU8 Tfap2a-203ENSMUST00000223869 2037 ntBASIC10.77□□□□□ -0.69
Trav13n-1A0A0G2JEU8 Gadd45gip1-201ENSMUST00000036734 2494 ntAPPRIS P1 TSL 1 (best) BASIC10.77□□□□□ -0.69
Trav13n-1A0A0G2JEU8 Galnt6os-201ENSMUST00000160960 1389 ntTSL 1 (best) BASIC10.77□□□□□ -0.69
Trav13n-1A0A0G2JEU8 Alpl-201ENSMUST00000030551 2522 ntAPPRIS P1 TSL 1 (best) BASIC10.77□□□□□ -0.69
Trav13n-1A0A0G2JEU8 Sec24a-203ENSMUST00000109092 2094 ntTSL 1 (best) BASIC10.77□□□□□ -0.69
Trav13n-1A0A0G2JEU8 Gemin5-205ENSMUST00000172035 6213 ntAPPRIS ALT2 TSL 1 (best) BASIC10.77□□□□□ -0.69
Trav13n-1A0A0G2JEU8 Phldb1-211ENSMUST00000135436 2844 ntTSL 1 (best) BASIC10.76□□□□□ -0.69
Trav13n-1A0A0G2JEU8 Zfp13-202ENSMUST00000115516 2104 ntAPPRIS ALT2 TSL 1 (best) BASIC10.76□□□□□ -0.69
Trav13n-1A0A0G2JEU8 Htr7-205ENSMUST00000166074 3079 ntTSL 5 BASIC10.76□□□□□ -0.69
Trav13n-1A0A0G2JEU8 Lypd1-201ENSMUST00000027582 1447 ntTSL 1 (best) BASIC10.76□□□□□ -0.69
Trav13n-1A0A0G2JEU8 Scube2-203ENSMUST00000106729 3563 ntAPPRIS P2 TSL 1 (best) BASIC10.76□□□□□ -0.69
Trav13n-1A0A0G2JEU8 Mael-202ENSMUST00000194057 1691 ntTSL 5 BASIC10.76□□□□□ -0.69
Trav13n-1A0A0G2JEU8 A330040F15Rik-202ENSMUST00000224046 1918 ntBASIC10.76□□□□□ -0.69
Trav13n-1A0A0G2JEU8 Reep1-201ENSMUST00000121469 3924 ntAPPRIS P1 TSL 1 (best) BASIC10.76□□□□□ -0.69
Trav13n-1A0A0G2JEU8 Thap12-201ENSMUST00000033009 3723 ntAPPRIS P1 TSL 1 (best) BASIC10.76□□□□□ -0.69
Trav13n-1A0A0G2JEU8 Mis12-201ENSMUST00000048807 3003 ntAPPRIS P1 TSL 1 (best) BASIC10.76□□□□□ -0.69
Trav13n-1A0A0G2JEU8 Gm29361-201ENSMUST00000183323 2000 ntBASIC10.76□□□□□ -0.69
Trav13n-1A0A0G2JEU8 Tsc2-217ENSMUST00000227745 5598 ntAPPRIS ALT2 BASIC10.76□□□□□ -0.69
Trav13n-1A0A0G2JEU8 Stard7-201ENSMUST00000110374 1530 ntTSL 1 (best) BASIC10.76□□□□□ -0.69
Trav13n-1A0A0G2JEU8 Lyrm1-203ENSMUST00000106517 1279 ntAPPRIS P1 TSL 1 (best) BASIC10.76□□□□□ -0.69
Trav13n-1A0A0G2JEU8 Slc39a1-ps-201ENSMUST00000120862 969 ntBASIC10.76□□□□□ -0.69
Trav13n-1A0A0G2JEU8 Gm25911-201ENSMUST00000157621 56 ntBASIC10.76□□□□□ -0.69
Trav13n-1A0A0G2JEU8 Ndufa1-201ENSMUST00000016571 419 ntAPPRIS P1 TSL 1 (best) BASIC10.76□□□□□ -0.69
Trav13n-1A0A0G2JEU8 4930556N13Rik-201ENSMUST00000173677 1034 ntTSL 1 (best) BASIC10.76□□□□□ -0.69
Trav13n-1A0A0G2JEU8 1600014C10Rik-207ENSMUST00000179503 784 ntTSL 5 BASIC10.76□□□□□ -0.69
Trav13n-1A0A0G2JEU8 Mzb1-201ENSMUST00000025211 905 ntAPPRIS P1 TSL 1 (best) BASIC10.76□□□□□ -0.69
Trav13n-1A0A0G2JEU8 Epc1-202ENSMUST00000050542 565 ntTSL 1 (best) BASIC10.76□□□□□ -0.69
Trav13n-1A0A0G2JEU8 1110038F14Rik-201ENSMUST00000071792 1010 ntAPPRIS P1 TSL 1 (best) BASIC10.76□□□□□ -0.69
Trav13n-1A0A0G2JEU8 2610027K06Rik-203ENSMUST00000140673 2076 ntTSL 5 BASIC10.76□□□□□ -0.69
Trav13n-1A0A0G2JEU8 Camta1-211ENSMUST00000169423 5208 ntAPPRIS P2 TSL 5 BASIC10.76□□□□□ -0.69
Trav13n-1A0A0G2JEU8 Grin1os-201ENSMUST00000129723 2891 ntTSL 1 (best) BASIC10.76□□□□□ -0.69
Trav13n-1A0A0G2JEU8 Myo1c-204ENSMUST00000108431 4718 ntAPPRIS P2 TSL 1 (best) BASIC10.76□□□□□ -0.69
Trav13n-1A0A0G2JEU8 A230060F14Rik-202ENSMUST00000190739 1889 ntBASIC10.76□□□□□ -0.69
Trav13n-1A0A0G2JEU8 Setd1b-204ENSMUST00000163030 8857 ntAPPRIS P2 TSL 5 BASIC10.76□□□□□ -0.69
Trav13n-1A0A0G2JEU8 Ubp1-206ENSMUST00000216558 1623 ntAPPRIS P4 TSL 1 (best) BASIC10.76□□□□□ -0.69
Trav13n-1A0A0G2JEU8 Cfap69-205ENSMUST00000135252 2188 ntAPPRIS ALT2 TSL 1 (best) BASIC10.76□□□□□ -0.69
Trav13n-1A0A0G2JEU8 Tle3-201ENSMUST00000034820 4646 ntTSL 1 (best) BASIC10.76□□□□□ -0.69
Trav13n-1A0A0G2JEU8 Hnf4a-202ENSMUST00000109411 4362 ntTSL 1 (best) BASIC10.76□□□□□ -0.69
Trav13n-1A0A0G2JEU8 Ntng1-203ENSMUST00000106570 1386 ntTSL 5 BASIC10.76□□□□□ -0.69
Trav13n-1A0A0G2JEU8 Gm10814-201ENSMUST00000180505 1933 ntTSL 1 (best) BASIC10.76□□□□□ -0.69
Trav13n-1A0A0G2JEU8 Ctnnd2-203ENSMUST00000226119 4111 ntAPPRIS ALT2 BASIC10.76□□□□□ -0.69
Trav13n-1A0A0G2JEU8 Cep55-203ENSMUST00000169673 2761 ntAPPRIS ALT2 TSL 1 (best) BASIC10.76□□□□□ -0.69
Trav13n-1A0A0G2JEU8 Cdk2-201ENSMUST00000026415 2240 ntAPPRIS P1 TSL 1 (best) BASIC10.76□□□□□ -0.69
Trav13n-1A0A0G2JEU8 Uhrf1bp1l-201ENSMUST00000020112 6448 ntAPPRIS P1 TSL 1 (best) BASIC10.76□□□□□ -0.69
Trav13n-1A0A0G2JEU8 Poli-201ENSMUST00000043286 2591 ntTSL 1 (best) BASIC10.75□□□□□ -0.69
Trav13n-1A0A0G2JEU8 Spns1-203ENSMUST00000119846 2017 ntTSL 5 BASIC10.75□□□□□ -0.69
Trav13n-1A0A0G2JEU8 AC157650.3-201ENSMUST00000225058 1476 ntBASIC10.75□□□□□ -0.69
Retrieved 100 of 76,532 protein–RNA pairs in 30 ms