Protein–RNA interactions for Protein: A0A0G2JDP3

Trav9n-2, T cell receptor alpha variable 9D-2 (Fragment), mousemouse

Predictions only

Length 113 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trav9n-2A0A0G2JDP3 Alg3-201ENSMUST00000045918 1451 ntAPPRIS P1 TSL 1 (best) BASIC10.8□□□□□ -0.68
Trav9n-2A0A0G2JDP3 Hnrnpa2b1-201ENSMUST00000069949 1647 ntTSL 1 (best) BASIC10.8□□□□□ -0.68
Trav9n-2A0A0G2JDP3 Setd1b-204ENSMUST00000163030 8857 ntAPPRIS P2 TSL 5 BASIC10.8□□□□□ -0.68
Trav9n-2A0A0G2JDP3 Camk2g-217ENSMUST00000226630 1937 ntBASIC10.8□□□□□ -0.68
Trav9n-2A0A0G2JDP3 Rps3-201ENSMUST00000032998 1908 ntAPPRIS P1 TSL 1 (best) BASIC10.8□□□□□ -0.68
Trav9n-2A0A0G2JDP3 Fkbp4-201ENSMUST00000032508 2217 ntAPPRIS P1 TSL 1 (best) BASIC10.8□□□□□ -0.68
Trav9n-2A0A0G2JDP3 Kcnip4-201ENSMUST00000087395 2366 ntTSL 5 BASIC10.8□□□□□ -0.68
Trav9n-2A0A0G2JDP3 Ctdp1-201ENSMUST00000036229 3713 ntAPPRIS P1 TSL 1 (best) BASIC10.8□□□□□ -0.68
Trav9n-2A0A0G2JDP3 Gm45779-201ENSMUST00000212189 4064 ntBASIC10.79□□□□□ -0.68
Trav9n-2A0A0G2JDP3 Gm21981-201ENSMUST00000143789 2721 ntAPPRIS P1 TSL 5 BASIC10.79□□□□□ -0.68
Trav9n-2A0A0G2JDP3 Hars-201ENSMUST00000001416 1987 ntAPPRIS P1 TSL 1 (best) BASIC10.79□□□□□ -0.68
Trav9n-2A0A0G2JDP3 Krt25-201ENSMUST00000038004 1989 ntAPPRIS P1 TSL 1 (best) BASIC10.79□□□□□ -0.68
Trav9n-2A0A0G2JDP3 Ccdc103-201ENSMUST00000021307 1841 ntAPPRIS P1 TSL 1 (best) BASIC10.79□□□□□ -0.68
Trav9n-2A0A0G2JDP3 Gm29676-201ENSMUST00000222396 1689 ntTSL 1 (best) BASIC10.79□□□□□ -0.68
Trav9n-2A0A0G2JDP3 Brpf1-209ENSMUST00000204198 4307 ntTSL 5 BASIC10.79□□□□□ -0.68
Trav9n-2A0A0G2JDP3 Fut11-201ENSMUST00000048016 4163 ntAPPRIS P1 TSL 1 (best) BASIC10.79□□□□□ -0.68
Trav9n-2A0A0G2JDP3 Gm3739-201ENSMUST00000165744 2011 ntAPPRIS P1 TSL 5 BASIC10.79□□□□□ -0.68
Trav9n-2A0A0G2JDP3 1700034H15Rik-202ENSMUST00000139827 4354 ntTSL 5 BASIC10.79□□□□□ -0.68
Trav9n-2A0A0G2JDP3 Oas1a-201ENSMUST00000080322 1885 ntAPPRIS P1 TSL 1 (best) BASIC10.79□□□□□ -0.68
Trav9n-2A0A0G2JDP3 Prss41-204ENSMUST00000151797 1743 ntTSL 1 (best) BASIC10.79□□□□□ -0.68
Trav9n-2A0A0G2JDP3 Dnase2a-201ENSMUST00000003910 1715 ntAPPRIS P2 TSL 1 (best) BASIC10.79□□□□□ -0.68
Trav9n-2A0A0G2JDP3 Terf1-201ENSMUST00000027057 1581 ntTSL 1 (best) BASIC10.79□□□□□ -0.68
Trav9n-2A0A0G2JDP3 Knop1-204ENSMUST00000106550 5524 ntAPPRIS P3 TSL 1 (best) BASIC10.79□□□□□ -0.68
Trav9n-2A0A0G2JDP3 Slc6a8-203ENSMUST00000114465 3314 ntAPPRIS P1 TSL 1 (best) BASIC10.79□□□□□ -0.68
Trav9n-2A0A0G2JDP3 Ndufab1-203ENSMUST00000123296 1416 ntAPPRIS P1 TSL 1 (best) BASIC10.79□□□□□ -0.68
Trav9n-2A0A0G2JDP3 Syvn1-203ENSMUST00000134667 3159 ntAPPRIS P2 TSL 1 (best) BASIC10.79□□□□□ -0.68
Trav9n-2A0A0G2JDP3 Mdk-204ENSMUST00000111309 771 ntAPPRIS P1 TSL 2 BASIC10.79□□□□□ -0.68
Trav9n-2A0A0G2JDP3 Wdr61-203ENSMUST00000121204 1290 ntAPPRIS P1 TSL 1 (best) BASIC10.79□□□□□ -0.68
Trav9n-2A0A0G2JDP3 Rhox13-201ENSMUST00000152730 876 ntAPPRIS P1 TSL 1 (best) BASIC10.79□□□□□ -0.68
Trav9n-2A0A0G2JDP3 Gm27741-201ENSMUST00000185060 237 ntBASIC10.79□□□□□ -0.68
Trav9n-2A0A0G2JDP3 Gm38708-201ENSMUST00000203855 677 ntTSL 5 BASIC10.79□□□□□ -0.68
Trav9n-2A0A0G2JDP3 Gm45144-201ENSMUST00000207473 354 ntTSL 5 BASIC10.79□□□□□ -0.68
Trav9n-2A0A0G2JDP3 Pih1d1-206ENSMUST00000210139 1077 ntAPPRIS P1 TSL 1 (best) BASIC10.79□□□□□ -0.68
Trav9n-2A0A0G2JDP3 6030408B16Rik-201ENSMUST00000071328 1155 ntAPPRIS ALT2 TSL 5 BASIC10.79□□□□□ -0.68
Trav9n-2A0A0G2JDP3 Aspm-205ENSMUST00000200083 6072 ntTSL 1 (best) BASIC10.79□□□□□ -0.68
Trav9n-2A0A0G2JDP3 Kdm5c-202ENSMUST00000112584 5900 ntAPPRIS ALT2 TSL 5 BASIC10.79□□□□□ -0.68
Trav9n-2A0A0G2JDP3 Tet3-203ENSMUST00000186548 5944 ntAPPRIS P1 TSL 1 (best) BASIC10.79□□□□□ -0.68
Trav9n-2A0A0G2JDP3 Rnps1-203ENSMUST00000163717 1920 ntAPPRIS P1 TSL 5 BASIC10.79□□□□□ -0.68
Trav9n-2A0A0G2JDP3 Gm5357-201ENSMUST00000212720 1924 ntBASIC10.79□□□□□ -0.68
Trav9n-2A0A0G2JDP3 Fbxl8-201ENSMUST00000036221 1901 ntAPPRIS P1 TSL 1 (best) BASIC10.79□□□□□ -0.68
Trav9n-2A0A0G2JDP3 Gm10676-201ENSMUST00000098778 3221 ntBASIC10.79□□□□□ -0.68
Trav9n-2A0A0G2JDP3 Afg3l2-201ENSMUST00000025408 3085 ntAPPRIS P1 TSL 1 (best) BASIC10.79□□□□□ -0.68
Trav9n-2A0A0G2JDP3 Slc35e2-201ENSMUST00000043829 2910 ntAPPRIS P1 TSL 1 (best) BASIC10.79□□□□□ -0.68
Trav9n-2A0A0G2JDP3 Pttg1ip-201ENSMUST00000009435 2294 ntAPPRIS P2 TSL 1 (best) BASIC10.79□□□□□ -0.68
Trav9n-2A0A0G2JDP3 Ercc2-203ENSMUST00000108461 2799 ntTSL 1 (best) BASIC10.79□□□□□ -0.68
Trav9n-2A0A0G2JDP3 4933433G15Rik-201ENSMUST00000180533 1481 ntTSL 1 (best) BASIC10.79□□□□□ -0.68
Trav9n-2A0A0G2JDP3 Mef2b-203ENSMUST00000110143 1312 ntAPPRIS ALT2 TSL 1 (best) BASIC10.79□□□□□ -0.68
Trav9n-2A0A0G2JDP3 1700029H14Rik-203ENSMUST00000134023 1319 ntAPPRIS ALT2 TSL 1 (best) BASIC10.79□□□□□ -0.68
Trav9n-2A0A0G2JDP3 Cyb5r1-201ENSMUST00000027726 1837 ntAPPRIS P1 TSL 1 (best) BASIC10.79□□□□□ -0.68
Trav9n-2A0A0G2JDP3 Map7d1-203ENSMUST00000122129 3249 ntAPPRIS ALT2 TSL 5 BASIC10.79□□□□□ -0.68
Trav9n-2A0A0G2JDP3 Irf2bpl-201ENSMUST00000038422 4098 ntAPPRIS P1 BASIC10.79□□□□□ -0.68
Trav9n-2A0A0G2JDP3 Spred2-202ENSMUST00000093299 4449 ntTSL 5 BASIC10.78□□□□□ -0.68
Trav9n-2A0A0G2JDP3 Tsc2-205ENSMUST00000226398 5459 ntAPPRIS P2 BASIC10.78□□□□□ -0.68
Trav9n-2A0A0G2JDP3 Washc1-201ENSMUST00000072383 2904 ntAPPRIS P1 TSL 1 (best) BASIC10.78□□□□□ -0.68
Trav9n-2A0A0G2JDP3 Slc41a1-201ENSMUST00000086559 4697 ntAPPRIS P1 TSL 1 (best) BASIC10.78□□□□□ -0.68
Trav9n-2A0A0G2JDP3 Slc22a18-202ENSMUST00000105917 1552 ntAPPRIS P1 TSL 1 (best) BASIC10.78□□□□□ -0.68
Trav9n-2A0A0G2JDP3 Endov-202ENSMUST00000106244 5070 ntAPPRIS P1 TSL 1 (best) BASIC10.78□□□□□ -0.68
Trav9n-2A0A0G2JDP3 Ascc3-201ENSMUST00000035606 7760 ntAPPRIS P1 TSL 5 BASIC10.78□□□□□ -0.68
Trav9n-2A0A0G2JDP3 Gm43598-201ENSMUST00000202482 2479 ntBASIC10.78□□□□□ -0.68
Trav9n-2A0A0G2JDP3 Luc7l3-201ENSMUST00000021226 3373 ntTSL 1 (best) BASIC10.78□□□□□ -0.68
Trav9n-2A0A0G2JDP3 Phtf2-201ENSMUST00000118174 4840 ntAPPRIS P1 TSL 1 (best) BASIC10.78□□□□□ -0.68
Trav9n-2A0A0G2JDP3 Trim11-203ENSMUST00000108810 2301 ntTSL 1 (best) BASIC10.78□□□□□ -0.68
Trav9n-2A0A0G2JDP3 Fbxl5-207ENSMUST00000124610 2306 ntTSL 5 BASIC10.78□□□□□ -0.68
Trav9n-2A0A0G2JDP3 Kcnn1-208ENSMUST00000212611 2528 ntAPPRIS P2 TSL 1 (best) BASIC10.78□□□□□ -0.68
Trav9n-2A0A0G2JDP3 Sp2-203ENSMUST00000107624 3055 ntAPPRIS P2 TSL 1 (best) BASIC10.78□□□□□ -0.68
Trav9n-2A0A0G2JDP3 Rbfox3-205ENSMUST00000117731 3084 ntAPPRIS ALT2 TSL 1 (best) BASIC10.78□□□□□ -0.68
Trav9n-2A0A0G2JDP3 Lhx3-202ENSMUST00000054099 2184 ntTSL 1 (best) BASIC10.78□□□□□ -0.68
Trav9n-2A0A0G2JDP3 Prnp-201ENSMUST00000091288 2184 ntAPPRIS P1 TSL 1 (best) BASIC10.78□□□□□ -0.68
Trav9n-2A0A0G2JDP3 Slc38a6-204ENSMUST00000126488 589 ntTSL 5 BASIC10.78□□□□□ -0.68
Trav9n-2A0A0G2JDP3 Cgrrf1-204ENSMUST00000140114 419 ntTSL 1 (best) BASIC10.78□□□□□ -0.68
Trav9n-2A0A0G2JDP3 Egfl8-201ENSMUST00000015611 1150 ntAPPRIS P2 TSL 1 (best) BASIC10.78□□□□□ -0.68
Trav9n-2A0A0G2JDP3 Znhit1-206ENSMUST00000156963 1208 ntTSL 1 (best) BASIC10.78□□□□□ -0.68
Trav9n-2A0A0G2JDP3 Csrp3-202ENSMUST00000167786 899 ntAPPRIS P1 TSL 1 (best) BASIC10.78□□□□□ -0.68
Trav9n-2A0A0G2JDP3 Gm20680-201ENSMUST00000176881 789 ntTSL 5 BASIC10.78□□□□□ -0.68
Trav9n-2A0A0G2JDP3 Gm43767-201ENSMUST00000198933 381 ntBASIC10.78□□□□□ -0.68
Trav9n-2A0A0G2JDP3 AC138767.1-201ENSMUST00000222661 415 ntBASIC10.78□□□□□ -0.68
Trav9n-2A0A0G2JDP3 Mzt1-203ENSMUST00000227948 952 ntBASIC10.78□□□□□ -0.68
Trav9n-2A0A0G2JDP3 Cela3a-201ENSMUST00000024200 958 ntAPPRIS P1 TSL 5 BASIC10.78□□□□□ -0.68
Trav9n-2A0A0G2JDP3 Ly6d-201ENSMUST00000040404 744 ntAPPRIS P1 TSL 1 (best) BASIC10.78□□□□□ -0.68
Trav9n-2A0A0G2JDP3 6030498E09Rik-201ENSMUST00000050744 1291 ntAPPRIS P1 TSL 1 (best) BASIC10.78□□□□□ -0.68
Trav9n-2A0A0G2JDP3 Ythdf2-201ENSMUST00000085181 955 ntTSL 2 BASIC10.78□□□□□ -0.68
Trav9n-2A0A0G2JDP3 Egfl8-202ENSMUST00000097345 1064 ntAPPRIS ALT2 TSL 1 (best) BASIC10.78□□□□□ -0.68
Trav9n-2A0A0G2JDP3 Ttc22-201ENSMUST00000047922 2554 ntAPPRIS P1 TSL 1 (best) BASIC10.78□□□□□ -0.68
Trav9n-2A0A0G2JDP3 Lmna-203ENSMUST00000120377 2021 ntAPPRIS ALT2 TSL 1 (best) BASIC10.78□□□□□ -0.68
Trav9n-2A0A0G2JDP3 Gm29361-201ENSMUST00000183323 2000 ntBASIC10.78□□□□□ -0.68
Trav9n-2A0A0G2JDP3 Slc7a15-204ENSMUST00000165657 1467 ntTSL 1 (best) BASIC10.78□□□□□ -0.68
Trav9n-2A0A0G2JDP3 Gtf2b-201ENSMUST00000029938 1455 ntAPPRIS P1 TSL 1 (best) BASIC10.78□□□□□ -0.68
Trav9n-2A0A0G2JDP3 Slc7a15-202ENSMUST00000095863 1467 ntAPPRIS P1 TSL 1 (best) BASIC10.78□□□□□ -0.68
Trav9n-2A0A0G2JDP3 Ccna2-201ENSMUST00000029270 2965 ntAPPRIS P1 TSL 1 (best) BASIC10.78□□□□□ -0.68
Trav9n-2A0A0G2JDP3 Abi2-206ENSMUST00000188594 1658 ntTSL 5 BASIC10.78□□□□□ -0.68
Trav9n-2A0A0G2JDP3 Taf2-201ENSMUST00000041733 5031 ntAPPRIS P1 TSL 1 (best) BASIC10.78□□□□□ -0.68
Trav9n-2A0A0G2JDP3 Rfx5-203ENSMUST00000107254 4450 ntTSL 1 (best) BASIC10.78□□□□□ -0.68
Trav9n-2A0A0G2JDP3 Atp2b3-202ENSMUST00000088429 4483 ntAPPRIS P2 TSL 1 (best) BASIC10.78□□□□□ -0.68
Trav9n-2A0A0G2JDP3 Gm8237-201ENSMUST00000164484 2051 ntAPPRIS P5 TSL 5 BASIC10.78□□□□□ -0.68
Trav9n-2A0A0G2JDP3 Nabp1-205ENSMUST00000186684 2677 ntTSL 1 (best) BASIC10.78□□□□□ -0.68
Trav9n-2A0A0G2JDP3 Lhx5-201ENSMUST00000031591 2689 ntAPPRIS P1 TSL 1 (best) BASIC10.78□□□□□ -0.68
Trav9n-2A0A0G2JDP3 Cul5-209ENSMUST00000166367 5942 ntTSL 5 BASIC10.78□□□□□ -0.68
Trav9n-2A0A0G2JDP3 Dcaf17-202ENSMUST00000102701 1703 ntTSL 1 (best) BASIC10.78□□□□□ -0.68
Trav9n-2A0A0G2JDP3 Ric8b-201ENSMUST00000038523 3069 ntTSL 1 (best) BASIC10.78□□□□□ -0.68
Trav9n-2A0A0G2JDP3 Tmod2-208ENSMUST00000215614 1921 ntAPPRIS P1 TSL 1 (best) BASIC10.78□□□□□ -0.68
Retrieved 100 of 76,532 protein–RNA pairs in 24.6 ms