Protein–RNA interactions for Protein: A0A0A6YYE2

Trbv3, T cell receptor beta, variable 3 (Fragment), mousemouse

Predictions only

Length 117 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trbv3A0A0A6YYE2 Peli3-202ENSMUST00000120475 2988 ntTSL 1 (best) BASIC11.43□□□□□ -0.58
Trbv3A0A0A6YYE2 Hotairm1-202ENSMUST00000132559 713 ntTSL 1 (best) BASIC11.43□□□□□ -0.58
Trbv3A0A0A6YYE2 Gm12973-201ENSMUST00000143967 607 ntTSL 5 BASIC11.43□□□□□ -0.58
Trbv3A0A0A6YYE2 Psmd13-209ENSMUST00000164681 726 ntTSL 5 BASIC11.43□□□□□ -0.58
Trbv3A0A0A6YYE2 Entpd4-205ENSMUST00000184314 989 ntTSL 1 (best) BASIC11.43□□□□□ -0.58
Trbv3A0A0A6YYE2 AC134329.2-201ENSMUST00000217897 428 ntBASIC11.43□□□□□ -0.58
Trbv3A0A0A6YYE2 Arhgef33-211ENSMUST00000225658 473 ntBASIC11.43□□□□□ -0.58
Trbv3A0A0A6YYE2 Metrn-201ENSMUST00000002344 987 ntAPPRIS P1 TSL 5 BASIC11.43□□□□□ -0.58
Trbv3A0A0A6YYE2 Rpl39l-201ENSMUST00000044103 805 ntAPPRIS P1 TSL 1 (best) BASIC11.43□□□□□ -0.58
Trbv3A0A0A6YYE2 Hist1h1a-201ENSMUST00000055770 741 ntAPPRIS P1 BASIC11.43□□□□□ -0.58
Trbv3A0A0A6YYE2 Entpd4b-201ENSMUST00000064846 989 ntTSL 1 (best) BASIC11.43□□□□□ -0.58
Trbv3A0A0A6YYE2 Gm8909-202ENSMUST00000097335 1182 ntAPPRIS ALT2 TSL 5 BASIC11.43□□□□□ -0.58
Trbv3A0A0A6YYE2 Grb2-203ENSMUST00000106497 2683 ntAPPRIS P1 TSL 1 (best) BASIC11.43□□□□□ -0.58
Trbv3A0A0A6YYE2 Sufu-203ENSMUST00000118440 2663 ntTSL 5 BASIC11.43□□□□□ -0.58
Trbv3A0A0A6YYE2 Sirt2-201ENSMUST00000072965 1843 ntAPPRIS P3 TSL 1 (best) BASIC11.43□□□□□ -0.58
Trbv3A0A0A6YYE2 Kif21b-201ENSMUST00000075164 9115 ntAPPRIS P1 TSL 2 BASIC11.43□□□□□ -0.58
Trbv3A0A0A6YYE2 Ints8-203ENSMUST00000108319 3220 ntAPPRIS P1 TSL 1 (best) BASIC11.43□□□□□ -0.58
Trbv3A0A0A6YYE2 Txndc11-202ENSMUST00000118362 4248 ntTSL 1 (best) BASIC11.43□□□□□ -0.58
Trbv3A0A0A6YYE2 Repin1-201ENSMUST00000009420 3145 ntAPPRIS P3 TSL 1 (best) BASIC11.43□□□□□ -0.58
Trbv3A0A0A6YYE2 Jph3-201ENSMUST00000026357 3637 ntAPPRIS P1 TSL 1 (best) BASIC11.43□□□□□ -0.58
Trbv3A0A0A6YYE2 Aldh1b1-201ENSMUST00000044384 2298 ntAPPRIS P1 TSL 1 (best) BASIC11.43□□□□□ -0.58
Trbv3A0A0A6YYE2 Ube3a-201ENSMUST00000107537 4911 ntAPPRIS ALT2 TSL 1 (best) BASIC11.43□□□□□ -0.58
Trbv3A0A0A6YYE2 Siglecf-201ENSMUST00000012798 2510 ntAPPRIS P3 TSL 1 (best) BASIC11.43□□□□□ -0.58
Trbv3A0A0A6YYE2 Pcsk4-201ENSMUST00000020340 2539 ntAPPRIS P1 TSL 1 (best) BASIC11.43□□□□□ -0.58
Trbv3A0A0A6YYE2 Slc43a1-201ENSMUST00000028469 2539 ntAPPRIS ALT2 TSL 1 (best) BASIC11.43□□□□□ -0.58
Trbv3A0A0A6YYE2 Hes2-201ENSMUST00000030782 2521 ntAPPRIS P1 TSL 1 (best) BASIC11.43□□□□□ -0.58
Trbv3A0A0A6YYE2 Fbxl4-201ENSMUST00000039234 2546 ntAPPRIS P1 TSL 1 (best) BASIC11.43□□□□□ -0.58
Trbv3A0A0A6YYE2 Rrp1-201ENSMUST00000062678 1984 ntAPPRIS P1 TSL 1 (best) BASIC11.43□□□□□ -0.58
Trbv3A0A0A6YYE2 Gdap1l1-201ENSMUST00000018087 2220 ntAPPRIS P2 TSL 1 (best) BASIC11.43□□□□□ -0.58
Trbv3A0A0A6YYE2 Bbx-204ENSMUST00000114477 4516 ntAPPRIS ALT2 TSL 1 (best) BASIC11.43□□□□□ -0.58
Trbv3A0A0A6YYE2 Gps1-201ENSMUST00000100134 1925 ntTSL 2 BASIC11.43□□□□□ -0.58
Trbv3A0A0A6YYE2 Slc52a3-201ENSMUST00000073228 2669 ntAPPRIS P1 TSL 1 (best) BASIC11.43□□□□□ -0.58
Trbv3A0A0A6YYE2 Galnt6os-201ENSMUST00000160960 1389 ntTSL 1 (best) BASIC11.42□□□□□ -0.58
Trbv3A0A0A6YYE2 Gm43868-201ENSMUST00000205187 2114 ntBASIC11.42□□□□□ -0.58
Trbv3A0A0A6YYE2 Ubqln2-201ENSMUST00000060714 3344 ntAPPRIS P1 BASIC11.42□□□□□ -0.58
Trbv3A0A0A6YYE2 Hoxa3-201ENSMUST00000114434 2591 ntAPPRIS P1 TSL 1 (best) BASIC11.42□□□□□ -0.58
Trbv3A0A0A6YYE2 Ak1-202ENSMUST00000113277 2063 ntAPPRIS P1 TSL 1 (best) BASIC11.42□□□□□ -0.58
Trbv3A0A0A6YYE2 Xpot-201ENSMUST00000039810 5992 ntTSL 5 BASIC11.42□□□□□ -0.58
Trbv3A0A0A6YYE2 Ephx3-202ENSMUST00000162117 1590 ntAPPRIS ALT2 TSL 1 (best) BASIC11.42□□□□□ -0.58
Trbv3A0A0A6YYE2 Ptprk-201ENSMUST00000166468 6177 ntAPPRIS P2 TSL 2 BASIC11.42□□□□□ -0.58
Trbv3A0A0A6YYE2 Plekhn1-201ENSMUST00000105569 3014 ntAPPRIS P1 TSL 1 (best) BASIC11.42□□□□□ -0.58
Trbv3A0A0A6YYE2 Dnajb12-205ENSMUST00000147914 3041 ntAPPRIS ALT2 TSL 1 (best) BASIC11.42□□□□□ -0.58
Trbv3A0A0A6YYE2 4632404H12Rik-201ENSMUST00000038450 2791 ntTSL 1 (best) BASIC11.42□□□□□ -0.58
Trbv3A0A0A6YYE2 Tmem110-201ENSMUST00000006701 3742 ntAPPRIS P1 TSL 1 (best) BASIC11.42□□□□□ -0.58
Trbv3A0A0A6YYE2 Synj1-203ENSMUST00000121759 7090 ntAPPRIS P4 TSL 5 BASIC11.42□□□□□ -0.58
Trbv3A0A0A6YYE2 Clgn-202ENSMUST00000109831 2293 ntAPPRIS P1 TSL 1 (best) BASIC11.42□□□□□ -0.58
Trbv3A0A0A6YYE2 Adam15-201ENSMUST00000029676 2975 ntAPPRIS P4 TSL 1 (best) BASIC11.42□□□□□ -0.58
Trbv3A0A0A6YYE2 Ttc7-201ENSMUST00000041110 4614 ntAPPRIS P1 TSL 1 (best) BASIC11.42□□□□□ -0.58
Trbv3A0A0A6YYE2 2010300F17Rik-202ENSMUST00000181758 2493 ntTSL 1 (best) BASIC11.42□□□□□ -0.58
Trbv3A0A0A6YYE2 Selenoh-201ENSMUST00000102646 783 ntAPPRIS P2 TSL 1 (best) BASIC11.42□□□□□ -0.58
Trbv3A0A0A6YYE2 Olfr55-201ENSMUST00000112168 948 ntAPPRIS P1 BASIC11.42□□□□□ -0.58
Trbv3A0A0A6YYE2 Gm13312-201ENSMUST00000119631 718 ntBASIC11.42□□□□□ -0.58
Trbv3A0A0A6YYE2 Gm13559-201ENSMUST00000120476 863 ntBASIC11.42□□□□□ -0.58
Trbv3A0A0A6YYE2 Saa1-201ENSMUST00000128088 609 ntAPPRIS P1 TSL 1 (best) BASIC11.42□□□□□ -0.58
Trbv3A0A0A6YYE2 Gm10653-202ENSMUST00000139570 835 ntBASIC11.42□□□□□ -0.58
Trbv3A0A0A6YYE2 Fhad1os2-201ENSMUST00000152351 945 ntTSL 1 (best) BASIC11.42□□□□□ -0.58
Trbv3A0A0A6YYE2 Gfod2-203ENSMUST00000155038 951 ntTSL 2 BASIC11.42□□□□□ -0.58
Trbv3A0A0A6YYE2 Gm20675-201ENSMUST00000175861 338 ntTSL 3 BASIC11.42□□□□□ -0.58
Trbv3A0A0A6YYE2 Msh3-205ENSMUST00000187424 666 ntTSL 2 BASIC11.42□□□□□ -0.58
Trbv3A0A0A6YYE2 Selenoh-206ENSMUST00000189988 390 ntTSL 3 BASIC11.42□□□□□ -0.58
Trbv3A0A0A6YYE2 Gm42884-202ENSMUST00000202523 423 ntTSL 3 BASIC11.42□□□□□ -0.58
Trbv3A0A0A6YYE2 Gm10358-201ENSMUST00000212864 1250 ntAPPRIS P1 BASIC11.42□□□□□ -0.58
Trbv3A0A0A6YYE2 AL669916.2-201ENSMUST00000213219 358 ntTSL 2 BASIC11.42□□□□□ -0.58
Trbv3A0A0A6YYE2 AC127349.1-201ENSMUST00000224590 266 ntBASIC11.42□□□□□ -0.58
Trbv3A0A0A6YYE2 Vapb-201ENSMUST00000067530 7029 ntAPPRIS P1 TSL 1 (best) BASIC11.42□□□□□ -0.58
Trbv3A0A0A6YYE2 Tcea1-202ENSMUST00000165720 2854 ntTSL 5 BASIC11.42□□□□□ -0.58
Trbv3A0A0A6YYE2 Col3a1-201ENSMUST00000087883 5564 ntAPPRIS P1 TSL 1 (best) BASIC11.42□□□□□ -0.58
Trbv3A0A0A6YYE2 Ccdc181-201ENSMUST00000027867 1909 ntAPPRIS P1 TSL 1 (best) BASIC11.42□□□□□ -0.58
Trbv3A0A0A6YYE2 Mocs1-204ENSMUST00000173033 2588 ntAPPRIS P1 TSL 1 (best) BASIC11.42□□□□□ -0.58
Trbv3A0A0A6YYE2 Prss23-201ENSMUST00000041761 3228 ntAPPRIS P1 TSL 1 (best) BASIC11.42□□□□□ -0.58
Trbv3A0A0A6YYE2 Kcnf1-201ENSMUST00000170580 4789 ntAPPRIS P1 BASIC11.42□□□□□ -0.58
Trbv3A0A0A6YYE2 Pam-201ENSMUST00000058762 4095 ntAPPRIS ALT2 TSL 1 (best) BASIC11.42□□□□□ -0.58
Trbv3A0A0A6YYE2 Fam20a-201ENSMUST00000020938 2541 ntAPPRIS P1 TSL 1 (best) BASIC11.42□□□□□ -0.58
Trbv3A0A0A6YYE2 Eif4e3-201ENSMUST00000032151 2515 ntAPPRIS P1 TSL 1 (best) BASIC11.42□□□□□ -0.58
Trbv3A0A0A6YYE2 B3gnt4-201ENSMUST00000031384 1423 ntAPPRIS P1 BASIC11.42□□□□□ -0.58
Trbv3A0A0A6YYE2 Ptk7-201ENSMUST00000044442 4255 ntAPPRIS P1 TSL 1 (best) BASIC11.42□□□□□ -0.58
Trbv3A0A0A6YYE2 Vwa2-201ENSMUST00000026068 4049 ntAPPRIS P1 TSL 1 (best) BASIC11.42□□□□□ -0.58
Trbv3A0A0A6YYE2 Ints3-202ENSMUST00000071488 4038 ntAPPRIS P2 TSL 1 (best) BASIC11.42□□□□□ -0.58
Trbv3A0A0A6YYE2 Gm6198-201ENSMUST00000191337 2929 ntBASIC11.42□□□□□ -0.58
Trbv3A0A0A6YYE2 Kcnj9-202ENSMUST00000194204 2265 ntAPPRIS P1 TSL 1 (best) BASIC11.42□□□□□ -0.58
Trbv3A0A0A6YYE2 Repin1-204ENSMUST00000135151 3057 ntAPPRIS ALT2 TSL 1 (best) BASIC11.41□□□□□ -0.58
Trbv3A0A0A6YYE2 Slc25a25-204ENSMUST00000113308 2643 ntTSL 5 BASIC11.41□□□□□ -0.58
Trbv3A0A0A6YYE2 Hpca-203ENSMUST00000116442 1568 ntAPPRIS P1 TSL 3 BASIC11.41□□□□□ -0.58
Trbv3A0A0A6YYE2 Efemp2-204ENSMUST00000165485 1557 ntAPPRIS P1 TSL 1 (best) BASIC11.41□□□□□ -0.58
Trbv3A0A0A6YYE2 Atp2b3-201ENSMUST00000033744 3894 ntTSL 1 (best) BASIC11.41□□□□□ -0.58
Trbv3A0A0A6YYE2 Ly6h-207ENSMUST00000163116 2801 ntAPPRIS ALT1 TSL 2 BASIC11.41□□□□□ -0.58
Trbv3A0A0A6YYE2 Camk2b-209ENSMUST00000109813 4023 ntAPPRIS P2 TSL 1 (best) BASIC11.41□□□□□ -0.58
Trbv3A0A0A6YYE2 Camk2b-204ENSMUST00000090443 4004 ntTSL 1 (best) BASIC11.41□□□□□ -0.58
Trbv3A0A0A6YYE2 Sept12-201ENSMUST00000170323 2576 ntAPPRIS P1 TSL 1 (best) BASIC11.41□□□□□ -0.58
Trbv3A0A0A6YYE2 Ociad2-201ENSMUST00000087195 2554 ntAPPRIS P1 TSL 1 (best) BASIC11.41□□□□□ -0.58
Trbv3A0A0A6YYE2 A930033H14Rik-201ENSMUST00000170048 2969 ntAPPRIS P1 TSL 1 (best) BASIC11.41□□□□□ -0.58
Trbv3A0A0A6YYE2 Rnf208-202ENSMUST00000114355 1333 ntAPPRIS P1 BASIC11.41□□□□□ -0.58
Trbv3A0A0A6YYE2 Zfp346-201ENSMUST00000021937 3333 ntAPPRIS P2 TSL 1 (best) BASIC11.41□□□□□ -0.58
Trbv3A0A0A6YYE2 Slc13a3-201ENSMUST00000029208 3524 ntAPPRIS P2 TSL 1 (best) BASIC11.41□□□□□ -0.58
Trbv3A0A0A6YYE2 Lipe-202ENSMUST00000054301 2661 ntAPPRIS ALT2 TSL 1 (best) BASIC11.41□□□□□ -0.58
Trbv3A0A0A6YYE2 Slc5a2-202ENSMUST00000118169 2277 ntAPPRIS P1 TSL 1 (best) BASIC11.41□□□□□ -0.58
Trbv3A0A0A6YYE2 Epsti1-201ENSMUST00000022591 1870 ntAPPRIS P2 TSL 1 (best) BASIC11.41□□□□□ -0.58
Trbv3A0A0A6YYE2 Pdia2-202ENSMUST00000120333 1661 ntAPPRIS ALT2 TSL 1 (best) BASIC11.41□□□□□ -0.58
Trbv3A0A0A6YYE2 Nkapl-201ENSMUST00000068235 1463 ntAPPRIS P1 BASIC11.41□□□□□ -0.58
Trbv3A0A0A6YYE2 Gm11729-201ENSMUST00000124901 713 ntTSL 3 BASIC11.41□□□□□ -0.58
Retrieved 100 of 76,532 protein–RNA pairs in 33.5 ms