Protein–RNA interactions for Protein: A0A075B6C4

Trav21-dv12, T cell receptor alpha variable 21-DV12 (Fragment), mousemouse

Predictions only

Length 109 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trav21-dv12A0A075B6C4 Gm11452-201ENSMUST00000122376 690 ntBASIC11.42□□□□□ -0.58
Trav21-dv12A0A075B6C4 Slbp-205ENSMUST00000139518 1191 ntAPPRIS ALT2 TSL 2 BASIC11.42□□□□□ -0.58
Trav21-dv12A0A075B6C4 Tmem9-205ENSMUST00000165125 901 ntAPPRIS P1 TSL 3 BASIC11.42□□□□□ -0.58
Trav21-dv12A0A075B6C4 Rbm14-203ENSMUST00000180008 370 ntTSL 5 BASIC11.42□□□□□ -0.58
Trav21-dv12A0A075B6C4 Gm9682-201ENSMUST00000197505 556 ntBASIC11.42□□□□□ -0.58
Trav21-dv12A0A075B6C4 Ucn-202ENSMUST00000201184 499 ntAPPRIS P1 TSL 1 (best) BASIC11.42□□□□□ -0.58
Trav21-dv12A0A075B6C4 Gm7787-201ENSMUST00000216858 688 ntBASIC11.42□□□□□ -0.58
Trav21-dv12A0A075B6C4 Arf3-201ENSMUST00000053183 3579 ntAPPRIS P1 TSL 1 (best) BASIC11.42□□□□□ -0.58
Trav21-dv12A0A075B6C4 Sema3b-202ENSMUST00000102529 2875 ntAPPRIS P1 TSL 1 (best) BASIC11.42□□□□□ -0.58
Trav21-dv12A0A075B6C4 Gm5184-201ENSMUST00000220417 1702 ntBASIC11.42□□□□□ -0.58
Trav21-dv12A0A075B6C4 Sema4b-204ENSMUST00000205822 3760 ntAPPRIS P1 TSL 1 (best) BASIC11.42□□□□□ -0.58
Trav21-dv12A0A075B6C4 Ccne2-207ENSMUST00000170901 3006 ntAPPRIS P4 TSL 1 (best) BASIC11.42□□□□□ -0.58
Trav21-dv12A0A075B6C4 Otud4-203ENSMUST00000173286 7213 ntAPPRIS ALT2 TSL 1 (best) BASIC11.42□□□□□ -0.58
Trav21-dv12A0A075B6C4 Irs3-201ENSMUST00000057314 2337 ntAPPRIS P2 TSL 1 (best) BASIC11.42□□□□□ -0.58
Trav21-dv12A0A075B6C4 Glis1-202ENSMUST00000106738 2744 ntAPPRIS ALT2 TSL 5 BASIC11.42□□□□□ -0.58
Trav21-dv12A0A075B6C4 Parg-202ENSMUST00000163350 3374 ntAPPRIS ALT2 TSL 1 (best) BASIC11.42□□□□□ -0.58
Trav21-dv12A0A075B6C4 Ltv1-201ENSMUST00000019950 2297 ntAPPRIS P1 TSL 1 (best) BASIC11.42□□□□□ -0.58
Trav21-dv12A0A075B6C4 Scap-201ENSMUST00000098350 4227 ntAPPRIS P1 TSL 1 (best) BASIC11.42□□□□□ -0.58
Trav21-dv12A0A075B6C4 Phtf2-201ENSMUST00000118174 4840 ntAPPRIS P1 TSL 1 (best) BASIC11.42□□□□□ -0.58
Trav21-dv12A0A075B6C4 Rnaseh2a-203ENSMUST00000109738 2044 ntAPPRIS P1 TSL 1 (best) BASIC11.42□□□□□ -0.58
Trav21-dv12A0A075B6C4 Aqp11-205ENSMUST00000206389 3737 ntAPPRIS P1 TSL 1 (best) BASIC11.42□□□□□ -0.58
Trav21-dv12A0A075B6C4 Poc1b-204ENSMUST00000159990 3449 ntTSL 1 (best) BASIC11.41□□□□□ -0.58
Trav21-dv12A0A075B6C4 Cep170b-204ENSMUST00000220627 5395 ntTSL 1 (best) BASIC11.41□□□□□ -0.58
Trav21-dv12A0A075B6C4 Dbn1-203ENSMUST00000109923 2940 ntAPPRIS P3 TSL 1 (best) BASIC11.41□□□□□ -0.58
Trav21-dv12A0A075B6C4 Eftud2-202ENSMUST00000107060 3339 ntTSL 1 (best) BASIC11.41□□□□□ -0.58
Trav21-dv12A0A075B6C4 Ttc13-210ENSMUST00000214828 3301 ntAPPRIS P1 TSL 5 BASIC11.41□□□□□ -0.58
Trav21-dv12A0A075B6C4 Hmga2-201ENSMUST00000072777 3710 ntAPPRIS P1 TSL 1 (best) BASIC11.41□□□□□ -0.58
Trav21-dv12A0A075B6C4 Cttn-202ENSMUST00000103079 3286 ntAPPRIS P3 TSL 1 (best) BASIC11.41□□□□□ -0.58
Trav21-dv12A0A075B6C4 Otud6b-201ENSMUST00000117268 3266 ntAPPRIS P1 TSL 1 (best) BASIC11.41□□□□□ -0.58
Trav21-dv12A0A075B6C4 Oas1a-201ENSMUST00000080322 1885 ntAPPRIS P1 TSL 1 (best) BASIC11.41□□□□□ -0.58
Trav21-dv12A0A075B6C4 Papd5-203ENSMUST00000119033 4624 ntAPPRIS P1 TSL 1 (best) BASIC11.41□□□□□ -0.58
Trav21-dv12A0A075B6C4 Carmil3-201ENSMUST00000076236 4602 ntAPPRIS P1 TSL 2 BASIC11.41□□□□□ -0.58
Trav21-dv12A0A075B6C4 Bex1-203ENSMUST00000113120 718 ntAPPRIS P1 TSL 3 BASIC11.41□□□□□ -0.58
Trav21-dv12A0A075B6C4 Gm16295-201ENSMUST00000139512 643 ntTSL 3 BASIC11.41□□□□□ -0.58
Trav21-dv12A0A075B6C4 Zfp125-202ENSMUST00000144811 704 ntTSL 5 BASIC11.41□□□□□ -0.58
Trav21-dv12A0A075B6C4 Gm5682-201ENSMUST00000173402 505 ntBASIC11.41□□□□□ -0.58
Trav21-dv12A0A075B6C4 Gm21887-202ENSMUST00000179760 483 ntAPPRIS ALT2 TSL 5 BASIC11.41□□□□□ -0.58
Trav21-dv12A0A075B6C4 Gm37335-201ENSMUST00000192656 447 ntTSL 5 BASIC11.41□□□□□ -0.58
Trav21-dv12A0A075B6C4 Umpk-ps-201ENSMUST00000211897 827 ntBASIC11.41□□□□□ -0.58
Trav21-dv12A0A075B6C4 Lamc2-201ENSMUST00000027753 5164 ntAPPRIS P1 TSL 5 BASIC11.41□□□□□ -0.58
Trav21-dv12A0A075B6C4 Bin2-207ENSMUST00000183211 2036 ntAPPRIS P1 TSL 5 BASIC11.41□□□□□ -0.58
Trav21-dv12A0A075B6C4 Lrp11-201ENSMUST00000019931 3386 ntAPPRIS P2 TSL 1 (best) BASIC11.41□□□□□ -0.58
Trav21-dv12A0A075B6C4 Cyb5r1-201ENSMUST00000027726 1837 ntAPPRIS P1 TSL 1 (best) BASIC11.41□□□□□ -0.58
Trav21-dv12A0A075B6C4 Dsp-202ENSMUST00000127906 7761 ntAPPRIS ALT2 TSL 5 BASIC11.41□□□□□ -0.58
Trav21-dv12A0A075B6C4 Secisbp2l-201ENSMUST00000053699 6797 ntAPPRIS P1 TSL 1 (best) BASIC11.41□□□□□ -0.58
Trav21-dv12A0A075B6C4 Psmc4-201ENSMUST00000032824 1440 ntAPPRIS P1 TSL 1 (best) BASIC11.41□□□□□ -0.58
Trav21-dv12A0A075B6C4 Kcnc2-201ENSMUST00000092175 5046 ntAPPRIS ALT2 TSL 1 (best) BASIC11.41□□□□□ -0.58
Trav21-dv12A0A075B6C4 Msi1-208ENSMUST00000150779 3133 ntAPPRIS P1 TSL 1 (best) BASIC11.41□□□□□ -0.58
Trav21-dv12A0A075B6C4 Mfsd2a-201ENSMUST00000030408 2151 ntAPPRIS P1 TSL 1 (best) BASIC11.41□□□□□ -0.58
Trav21-dv12A0A075B6C4 Cgn-201ENSMUST00000107272 4963 ntAPPRIS ALT2 TSL 1 (best) BASIC11.41□□□□□ -0.58
Trav21-dv12A0A075B6C4 Ptp4a1-202ENSMUST00000076587 2851 ntAPPRIS P1 TSL 1 (best) BASIC11.41□□□□□ -0.58
Trav21-dv12A0A075B6C4 Dph5-204ENSMUST00000189799 1558 ntAPPRIS P1 TSL 5 BASIC11.41□□□□□ -0.58
Trav21-dv12A0A075B6C4 Dctn1-201ENSMUST00000077407 4118 ntAPPRIS ALT2 TSL 1 (best) BASIC11.41□□□□□ -0.58
Trav21-dv12A0A075B6C4 Trmt6-201ENSMUST00000039554 2828 ntAPPRIS P1 TSL 1 (best) BASIC11.41□□□□□ -0.58
Trav21-dv12A0A075B6C4 Srcin1-202ENSMUST00000107593 3733 ntAPPRIS ALT2 TSL 5 BASIC11.4□□□□□ -0.58
Trav21-dv12A0A075B6C4 Cndp2-202ENSMUST00000168419 2088 ntAPPRIS P1 TSL 1 (best) BASIC11.4□□□□□ -0.58
Trav21-dv12A0A075B6C4 Cd151-202ENSMUST00000106000 1865 ntAPPRIS P1 TSL 5 BASIC11.4□□□□□ -0.58
Trav21-dv12A0A075B6C4 Card9-201ENSMUST00000028294 1880 ntAPPRIS P1 TSL 5 BASIC11.4□□□□□ -0.58
Trav21-dv12A0A075B6C4 Nsg2-201ENSMUST00000020537 2239 ntAPPRIS P1 TSL 1 (best) BASIC11.4□□□□□ -0.58
Trav21-dv12A0A075B6C4 Dtd2-201ENSMUST00000021339 2564 ntAPPRIS P1 TSL 1 (best) BASIC11.4□□□□□ -0.58
Trav21-dv12A0A075B6C4 Gm39027-201ENSMUST00000208560 2942 ntTSL 5 BASIC11.4□□□□□ -0.58
Trav21-dv12A0A075B6C4 Tcf12-202ENSMUST00000183404 6299 ntAPPRIS P3 TSL 1 (best) BASIC11.4□□□□□ -0.58
Trav21-dv12A0A075B6C4 Sp2-203ENSMUST00000107624 3055 ntAPPRIS P2 TSL 1 (best) BASIC11.4□□□□□ -0.58
Trav21-dv12A0A075B6C4 Gm17108-201ENSMUST00000168625 2877 ntTSL 1 (best) BASIC11.4□□□□□ -0.58
Trav21-dv12A0A075B6C4 Mrpl58-203ENSMUST00000106539 2522 ntTSL 1 (best) BASIC11.4□□□□□ -0.58
Trav21-dv12A0A075B6C4 Kcp-201ENSMUST00000078112 4775 ntTSL 5 BASIC11.4□□□□□ -0.58
Trav21-dv12A0A075B6C4 Hyou1-201ENSMUST00000066601 4432 ntAPPRIS P1 TSL 1 (best) BASIC11.4□□□□□ -0.58
Trav21-dv12A0A075B6C4 Xpot-201ENSMUST00000039810 5992 ntTSL 5 BASIC11.4□□□□□ -0.58
Trav21-dv12A0A075B6C4 Hif1a-201ENSMUST00000021530 4724 ntAPPRIS P3 TSL 1 (best) BASIC11.4□□□□□ -0.58
Trav21-dv12A0A075B6C4 Sned1-201ENSMUST00000062202 9147 ntAPPRIS P1 TSL 1 (best) BASIC11.4□□□□□ -0.58
Trav21-dv12A0A075B6C4 Ndufb6-202ENSMUST00000108108 480 ntTSL 3 BASIC11.4□□□□□ -0.58
Trav21-dv12A0A075B6C4 Pgam1-ps2-201ENSMUST00000117129 765 ntBASIC11.4□□□□□ -0.58
Trav21-dv12A0A075B6C4 4930481B07Rik-201ENSMUST00000128160 1089 ntTSL 1 (best) BASIC11.4□□□□□ -0.58
Trav21-dv12A0A075B6C4 Gm11467-201ENSMUST00000129407 674 ntTSL 3 BASIC11.4□□□□□ -0.58
Trav21-dv12A0A075B6C4 D830030K20Rik-204ENSMUST00000225885 1142 ntBASIC11.4□□□□□ -0.58
Trav21-dv12A0A075B6C4 Ndufb9-201ENSMUST00000022980 704 ntAPPRIS P1 TSL 1 (best) BASIC11.4□□□□□ -0.58
Trav21-dv12A0A075B6C4 Ccna2-201ENSMUST00000029270 2965 ntAPPRIS P1 TSL 1 (best) BASIC11.4□□□□□ -0.58
Trav21-dv12A0A075B6C4 Cklf-201ENSMUST00000034342 667 ntAPPRIS P4 TSL 1 (best) BASIC11.4□□□□□ -0.58
Trav21-dv12A0A075B6C4 Cd300c-201ENSMUST00000061637 690 ntAPPRIS ALT2 TSL 5 BASIC11.4□□□□□ -0.58
Trav21-dv12A0A075B6C4 Krtap19-3-201ENSMUST00000075284 526 ntAPPRIS P1 BASIC11.4□□□□□ -0.58
Trav21-dv12A0A075B6C4 Cd300c-202ENSMUST00000092466 700 ntAPPRIS P5 TSL 5 BASIC11.4□□□□□ -0.58
Trav21-dv12A0A075B6C4 Zfand3-201ENSMUST00000057897 2617 ntTSL 1 (best) BASIC11.4□□□□□ -0.58
Trav21-dv12A0A075B6C4 Dzip1-202ENSMUST00000047208 4476 ntAPPRIS P1 TSL 5 BASIC11.4□□□□□ -0.58
Trav21-dv12A0A075B6C4 Ercc2-203ENSMUST00000108461 2799 ntTSL 1 (best) BASIC11.4□□□□□ -0.58
Trav21-dv12A0A075B6C4 Tubgcp4-215ENSMUST00000186659 2915 ntAPPRIS ALT1 TSL 1 (best) BASIC11.4□□□□□ -0.58
Trav21-dv12A0A075B6C4 Spred2-202ENSMUST00000093299 4449 ntTSL 5 BASIC11.4□□□□□ -0.58
Trav21-dv12A0A075B6C4 Lrp10-201ENSMUST00000022782 4228 ntAPPRIS P1 TSL 1 (best) BASIC11.4□□□□□ -0.58
Trav21-dv12A0A075B6C4 Tmem116-204ENSMUST00000111795 2221 ntAPPRIS ALT2 TSL 1 (best) BASIC11.4□□□□□ -0.58
Trav21-dv12A0A075B6C4 AI593442-203ENSMUST00000213937 5674 ntAPPRIS P1 TSL 2 BASIC11.4□□□□□ -0.58
Trav21-dv12A0A075B6C4 Tpm1-209ENSMUST00000113690 2890 ntTSL 3 BASIC11.4□□□□□ -0.58
Trav21-dv12A0A075B6C4 Cxcr3-201ENSMUST00000056614 1731 ntAPPRIS P1 TSL 1 (best) BASIC11.4□□□□□ -0.58
Trav21-dv12A0A075B6C4 Irgc1-201ENSMUST00000080594 1737 ntAPPRIS P1 TSL 1 (best) BASIC11.4□□□□□ -0.58
Trav21-dv12A0A075B6C4 AI849053-201ENSMUST00000181021 2658 ntTSL 3 BASIC11.4□□□□□ -0.59
Trav21-dv12A0A075B6C4 Nptn-201ENSMUST00000085651 2024 ntTSL 1 (best) BASIC11.4□□□□□ -0.59
Trav21-dv12A0A075B6C4 P2rx3-201ENSMUST00000028465 1812 ntAPPRIS P2 TSL 1 (best) BASIC11.39□□□□□ -0.59
Trav21-dv12A0A075B6C4 Spock1-203ENSMUST00000185905 2794 ntTSL 1 (best) BASIC11.39□□□□□ -0.59
Trav21-dv12A0A075B6C4 Gm12462-201ENSMUST00000140826 3056 ntTSL 1 (best) BASIC11.39□□□□□ -0.59
Trav21-dv12A0A075B6C4 Zfyve27-201ENSMUST00000099443 2573 ntAPPRIS ALT2 TSL 1 (best) BASIC11.39□□□□□ -0.59
Trav21-dv12A0A075B6C4 4930528D03Rik-201ENSMUST00000181528 1339 ntTSL 1 (best) BASIC11.39□□□□□ -0.59
Trav21-dv12A0A075B6C4 Gm21981-201ENSMUST00000143789 2721 ntAPPRIS P1 TSL 5 BASIC11.39□□□□□ -0.59
Retrieved 100 of 76,532 protein–RNA pairs in 26.6 ms