Protein–RNA interactions for Protein: A0A075B6B9

Trav6d-5, T cell receptor alpha variable 6D-5 (Fragment), mousemouse

Predictions only

Length 112 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trav6d-5A0A075B6B9 Irf7-203ENSMUST00000106023 2237 ntAPPRIS ALT2 TSL 1 (best) BASIC11.98□□□□□ -0.49
Trav6d-5A0A075B6B9 Angptl7-201ENSMUST00000030840 2157 ntAPPRIS P1 TSL 1 (best) BASIC11.98□□□□□ -0.49
Trav6d-5A0A075B6B9 Stx5a-202ENSMUST00000073430 2112 ntAPPRIS P2 TSL 1 (best) BASIC11.98□□□□□ -0.49
Trav6d-5A0A075B6B9 Emilin3-201ENSMUST00000057169 3547 ntAPPRIS P3 TSL 1 (best) BASIC11.98□□□□□ -0.49
Trav6d-5A0A075B6B9 9330182L06Rik-201ENSMUST00000069538 4688 ntAPPRIS P2 TSL 1 (best) BASIC11.98□□□□□ -0.49
Trav6d-5A0A075B6B9 Cyp27a1-201ENSMUST00000027356 1892 ntAPPRIS P1 TSL 1 (best) BASIC11.97□□□□□ -0.49
Trav6d-5A0A075B6B9 Arhgef40-201ENSMUST00000093813 5621 ntAPPRIS P4 TSL 1 (best) BASIC11.97□□□□□ -0.49
Trav6d-5A0A075B6B9 Tsc2-217ENSMUST00000227745 5598 ntAPPRIS ALT2 BASIC11.97□□□□□ -0.49
Trav6d-5A0A075B6B9 Fgd1-201ENSMUST00000026296 4001 ntAPPRIS P1 TSL 1 (best) BASIC11.97□□□□□ -0.49
Trav6d-5A0A075B6B9 Exosc5-206ENSMUST00000206561 1680 ntAPPRIS P1 TSL 1 (best) BASIC11.97□□□□□ -0.49
Trav6d-5A0A075B6B9 Pid1-204ENSMUST00000176559 1564 ntTSL 2 BASIC11.97□□□□□ -0.49
Trav6d-5A0A075B6B9 Celf4-207ENSMUST00000225477 2626 ntAPPRIS P3 BASIC11.97□□□□□ -0.49
Trav6d-5A0A075B6B9 R3hdm4-202ENSMUST00000171416 1543 ntAPPRIS P1 TSL 1 (best) BASIC11.97□□□□□ -0.49
Trav6d-5A0A075B6B9 Siglecf-201ENSMUST00000012798 2510 ntAPPRIS P3 TSL 1 (best) BASIC11.97□□□□□ -0.49
Trav6d-5A0A075B6B9 Rnf34-201ENSMUST00000031434 4440 ntAPPRIS P1 TSL 1 (best) BASIC11.97□□□□□ -0.49
Trav6d-5A0A075B6B9 Fstl4-201ENSMUST00000036796 4380 ntAPPRIS P1 TSL 1 (best) BASIC11.97□□□□□ -0.49
Trav6d-5A0A075B6B9 Glb1-201ENSMUST00000063042 2396 ntAPPRIS P1 TSL 1 (best) BASIC11.97□□□□□ -0.49
Trav6d-5A0A075B6B9 Efnb1-201ENSMUST00000052839 3258 ntAPPRIS P1 TSL 1 (best) BASIC11.97□□□□□ -0.49
Trav6d-5A0A075B6B9 Kctd14-201ENSMUST00000050732 2343 ntAPPRIS ALT2 TSL 1 (best) BASIC11.97□□□□□ -0.49
Trav6d-5A0A075B6B9 Rcan1-201ENSMUST00000023672 2192 ntAPPRIS P1 TSL 1 (best) BASIC11.97□□□□□ -0.49
Trav6d-5A0A075B6B9 Tsc22d1-208ENSMUST00000142683 797 ntTSL 3 BASIC11.97□□□□□ -0.49
Trav6d-5A0A075B6B9 Flg-207ENSMUST00000180293 768 ntAPPRIS ALT2 BASIC11.97□□□□□ -0.49
Trav6d-5A0A075B6B9 Washc3-203ENSMUST00000182183 838 ntAPPRIS ALT2 TSL 2 BASIC11.97□□□□□ -0.49
Trav6d-5A0A075B6B9 Zfp524-202ENSMUST00000207901 1263 ntAPPRIS P1 TSL 5 BASIC11.97□□□□□ -0.49
Trav6d-5A0A075B6B9 Ubiad1-201ENSMUST00000051633 2992 ntAPPRIS P1 TSL 1 (best) BASIC11.97□□□□□ -0.49
Trav6d-5A0A075B6B9 Pla2g12b-201ENSMUST00000009790 1091 ntAPPRIS P1 TSL 1 (best) BASIC11.97□□□□□ -0.49
Trav6d-5A0A075B6B9 Plekha1-203ENSMUST00000120441 3777 ntAPPRIS ALT2 TSL 5 BASIC11.97□□□□□ -0.49
Trav6d-5A0A075B6B9 Mlkl-201ENSMUST00000056157 2003 ntAPPRIS ALT2 TSL 1 (best) BASIC11.97□□□□□ -0.49
Trav6d-5A0A075B6B9 Sipa1-203ENSMUST00000164304 3614 ntAPPRIS P1 TSL 1 (best) BASIC11.97□□□□□ -0.49
Trav6d-5A0A075B6B9 Tmem218-201ENSMUST00000034632 2619 ntAPPRIS P1 TSL 1 (best) BASIC11.97□□□□□ -0.49
Trav6d-5A0A075B6B9 Tubb3-201ENSMUST00000071134 1868 ntAPPRIS P1 TSL 1 (best) BASIC11.97□□□□□ -0.49
Trav6d-5A0A075B6B9 Slc43a1-201ENSMUST00000028469 2539 ntAPPRIS ALT2 TSL 1 (best) BASIC11.97□□□□□ -0.49
Trav6d-5A0A075B6B9 Tpr-203ENSMUST00000124973 7430 ntAPPRIS P2 TSL 1 (best) BASIC11.97□□□□□ -0.49
Trav6d-5A0A075B6B9 Sohlh2-201ENSMUST00000029369 2364 ntAPPRIS P1 TSL 1 (best) BASIC11.97□□□□□ -0.49
Trav6d-5A0A075B6B9 Fgf9-201ENSMUST00000022545 1593 ntAPPRIS P1 TSL 1 (best) BASIC11.96□□□□□ -0.49
Trav6d-5A0A075B6B9 Ly6h-207ENSMUST00000163116 2801 ntAPPRIS ALT1 TSL 2 BASIC11.96□□□□□ -0.49
Trav6d-5A0A075B6B9 Kpnb1-201ENSMUST00000001479 5894 ntAPPRIS P1 TSL 1 (best) BASIC11.96□□□□□ -0.49
Trav6d-5A0A075B6B9 Poli-202ENSMUST00000121674 2778 ntAPPRIS P1 TSL 1 (best) BASIC11.96□□□□□ -0.49
Trav6d-5A0A075B6B9 Dmxl1-202ENSMUST00000180611 11319 ntAPPRIS P2 TSL 1 (best) BASIC11.96□□□□□ -0.49
Trav6d-5A0A075B6B9 Rab11b-203ENSMUST00000173860 1544 ntTSL 1 (best) BASIC11.96□□□□□ -0.49
Trav6d-5A0A075B6B9 Ash2l-202ENSMUST00000110608 2134 ntTSL 5 BASIC11.96□□□□□ -0.49
Trav6d-5A0A075B6B9 Ap2a1-202ENSMUST00000107857 3301 ntTSL 1 (best) BASIC11.96□□□□□ -0.49
Trav6d-5A0A075B6B9 Dennd5b-201ENSMUST00000111557 9831 ntAPPRIS P1 TSL 5 BASIC11.96□□□□□ -0.49
Trav6d-5A0A075B6B9 Snx8-205ENSMUST00000196566 1914 ntAPPRIS ALT2 TSL 5 BASIC11.96□□□□□ -0.49
Trav6d-5A0A075B6B9 Tspan11-201ENSMUST00000032501 5188 ntAPPRIS P1 TSL 1 (best) BASIC11.96□□□□□ -0.49
Trav6d-5A0A075B6B9 Renbp-201ENSMUST00000114379 1318 ntTSL 1 (best) BASIC11.96□□□□□ -0.49
Trav6d-5A0A075B6B9 Elp6-205ENSMUST00000199592 1304 ntAPPRIS P1 TSL 1 (best) BASIC11.96□□□□□ -0.49
Trav6d-5A0A075B6B9 Tsc2-221ENSMUST00000228412 5432 ntAPPRIS ALT2 BASIC11.96□□□□□ -0.49
Trav6d-5A0A075B6B9 Gm11453-201ENSMUST00000117318 1007 ntBASIC11.96□□□□□ -0.49
Trav6d-5A0A075B6B9 Gm15165-201ENSMUST00000118140 502 ntBASIC11.96□□□□□ -0.49
Trav6d-5A0A075B6B9 Saa1-201ENSMUST00000128088 609 ntAPPRIS P1 TSL 1 (best) BASIC11.96□□□□□ -0.49
Trav6d-5A0A075B6B9 Gm16075-201ENSMUST00000135873 361 ntTSL 3 BASIC11.96□□□□□ -0.49
Trav6d-5A0A075B6B9 2210408F21Rik-208ENSMUST00000144612 450 ntTSL 3 BASIC11.96□□□□□ -0.49
Trav6d-5A0A075B6B9 Jpx-202ENSMUST00000182447 712 ntTSL 3 BASIC11.96□□□□□ -0.49
Trav6d-5A0A075B6B9 Tpi-rs2-201ENSMUST00000182471 756 ntBASIC11.96□□□□□ -0.49
Trav6d-5A0A075B6B9 Gm29257-201ENSMUST00000186115 639 ntBASIC11.96□□□□□ -0.49
Trav6d-5A0A075B6B9 Gm43077-201ENSMUST00000200602 491 ntTSL 3 BASIC11.96□□□□□ -0.49
Trav6d-5A0A075B6B9 Gm8655-201ENSMUST00000221159 852 ntBASIC11.96□□□□□ -0.49
Trav6d-5A0A075B6B9 D230030E09Rik-201ENSMUST00000222459 884 ntTSL 1 (best) BASIC11.96□□□□□ -0.49
Trav6d-5A0A075B6B9 AC155729.1-201ENSMUST00000227758 544 ntBASIC11.96□□□□□ -0.49
Trav6d-5A0A075B6B9 Gm9991-201ENSMUST00000070048 1207 ntTSL 1 (best) BASIC11.96□□□□□ -0.49
Trav6d-5A0A075B6B9 Safb2-201ENSMUST00000075510 3277 ntAPPRIS P1 TSL 1 (best) BASIC11.96□□□□□ -0.49
Trav6d-5A0A075B6B9 Slc39a4-201ENSMUST00000073428 2224 ntAPPRIS P1 TSL 1 (best) BASIC11.96□□□□□ -0.49
Trav6d-5A0A075B6B9 Cpeb2-205ENSMUST00000169035 7050 ntAPPRIS P2 TSL 5 BASIC11.96□□□□□ -0.5
Trav6d-5A0A075B6B9 1110008P14Rik-202ENSMUST00000146423 2618 ntTSL 1 (best) BASIC11.96□□□□□ -0.5
Trav6d-5A0A075B6B9 Ntrk2-209ENSMUST00000225950 2640 ntBASIC11.96□□□□□ -0.5
Trav6d-5A0A075B6B9 Slc22a18-202ENSMUST00000105917 1552 ntAPPRIS P1 TSL 1 (best) BASIC11.96□□□□□ -0.5
Trav6d-5A0A075B6B9 Eif4g1-204ENSMUST00000115460 5638 ntAPPRIS P3 TSL 5 BASIC11.96□□□□□ -0.5
Trav6d-5A0A075B6B9 Sema5b-202ENSMUST00000120756 4646 ntAPPRIS ALT2 TSL 1 (best) BASIC11.96□□□□□ -0.5
Trav6d-5A0A075B6B9 Espn-220ENSMUST00000207676 4618 ntAPPRIS ALT2 TSL 5 BASIC11.96□□□□□ -0.5
Trav6d-5A0A075B6B9 Fbxw2-205ENSMUST00000113078 1872 ntAPPRIS P1 TSL 1 (best) BASIC11.95□□□□□ -0.5
Trav6d-5A0A075B6B9 Aldh1a2-201ENSMUST00000034723 2264 ntAPPRIS P1 TSL 1 (best) BASIC11.95□□□□□ -0.5
Trav6d-5A0A075B6B9 Lrp8os2-204ENSMUST00000188737 3078 ntTSL 1 (best) BASIC11.95□□□□□ -0.5
Trav6d-5A0A075B6B9 Pelp1-201ENSMUST00000019065 3435 ntAPPRIS P1 TSL 1 (best) BASIC11.95□□□□□ -0.5
Trav6d-5A0A075B6B9 Fkbp10-201ENSMUST00000001595 2584 ntAPPRIS P1 TSL 1 (best) BASIC11.95□□□□□ -0.5
Trav6d-5A0A075B6B9 Serpinh1-205ENSMUST00000208119 2173 ntAPPRIS P1 TSL 1 (best) BASIC11.95□□□□□ -0.5
Trav6d-5A0A075B6B9 Comt-202ENSMUST00000115609 1786 ntAPPRIS P1 TSL 1 (best) BASIC11.95□□□□□ -0.5
Trav6d-5A0A075B6B9 Slfnl1-201ENSMUST00000062990 1762 ntAPPRIS P1 TSL 1 (best) BASIC11.95□□□□□ -0.5
Trav6d-5A0A075B6B9 Gm2788-202ENSMUST00000147173 1390 ntTSL 1 (best) BASIC11.95□□□□□ -0.5
Trav6d-5A0A075B6B9 Ppt2-205ENSMUST00000169067 1392 ntAPPRIS P1 TSL 5 BASIC11.95□□□□□ -0.5
Trav6d-5A0A075B6B9 Fbxl4-201ENSMUST00000039234 2546 ntAPPRIS P1 TSL 1 (best) BASIC11.95□□□□□ -0.5
Trav6d-5A0A075B6B9 Slc16a13-201ENSMUST00000060010 2531 ntAPPRIS P1 TSL 1 (best) BASIC11.95□□□□□ -0.5
Trav6d-5A0A075B6B9 Klhl12-203ENSMUST00000116528 3277 ntAPPRIS P1 TSL 5 BASIC11.95□□□□□ -0.5
Trav6d-5A0A075B6B9 Igsf8-204ENSMUST00000139528 2866 ntTSL 2 BASIC11.95□□□□□ -0.5
Trav6d-5A0A075B6B9 Mzf1-204ENSMUST00000182490 2872 ntAPPRIS ALT2 TSL 1 (best) BASIC11.95□□□□□ -0.5
Trav6d-5A0A075B6B9 Dmkn-205ENSMUST00000165887 2063 ntAPPRIS ALT2 TSL 1 (best) BASIC11.95□□□□□ -0.5
Trav6d-5A0A075B6B9 Mettl27-202ENSMUST00000068617 1685 ntTSL 1 (best) BASIC11.95□□□□□ -0.5
Trav6d-5A0A075B6B9 Ppfia3-201ENSMUST00000003961 4647 ntAPPRIS P1 TSL 1 (best) BASIC11.95□□□□□ -0.5
Trav6d-5A0A075B6B9 Thap3-202ENSMUST00000105665 832 ntAPPRIS ALT2 TSL 1 (best) BASIC11.95□□□□□ -0.5
Trav6d-5A0A075B6B9 Gm13962-201ENSMUST00000131512 611 ntTSL 5 BASIC11.95□□□□□ -0.5
Trav6d-5A0A075B6B9 Gm17808-201ENSMUST00000200859 894 ntBASIC11.95□□□□□ -0.5
Trav6d-5A0A075B6B9 AC156832.2-201ENSMUST00000216217 1295 ntTSL 1 (best) BASIC11.95□□□□□ -0.5
Trav6d-5A0A075B6B9 AC171004.1-201ENSMUST00000221723 664 ntTSL 3 BASIC11.95□□□□□ -0.5
Trav6d-5A0A075B6B9 Treml1-204ENSMUST00000224001 1220 ntAPPRIS P2 BASIC11.95□□□□□ -0.5
Trav6d-5A0A075B6B9 Rubcn-201ENSMUST00000040986 5257 ntAPPRIS P3 TSL 1 (best) BASIC11.95□□□□□ -0.5
Trav6d-5A0A075B6B9 Rfx5-203ENSMUST00000107254 4450 ntTSL 1 (best) BASIC11.95□□□□□ -0.5
Trav6d-5A0A075B6B9 Etl4-208ENSMUST00000114614 5898 ntAPPRIS ALT2 TSL 1 (best) BASIC11.95□□□□□ -0.5
Trav6d-5A0A075B6B9 Epb41l1-202ENSMUST00000103135 6177 ntAPPRIS P1 TSL 5 BASIC11.95□□□□□ -0.5
Trav6d-5A0A075B6B9 1300017J02Rik-201ENSMUST00000035163 2284 ntAPPRIS P1 TSL 1 (best) BASIC11.95□□□□□ -0.5
Trav6d-5A0A075B6B9 Casz1-202ENSMUST00000122222 7926 ntAPPRIS P1 TSL 5 BASIC11.95□□□□□ -0.5
Retrieved 100 of 76,532 protein–RNA pairs in 28 ms